Viruses: 65102887
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Entry
65102887 CDS
T40000
Symbol
UL6, KM717_gp44
Name
(RefSeq) Cervid alphaherpesvirus 3; capsid portal protein
KO
K26020
Herpesviridae portal protein
Virus
2115790
Cervid alphaherpesvirus 3
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Herpes_UL6
CoV_nucleocap
TP2
SDP_N
Motif
Other DBs
NCBI-GeneID:
65102887
NCBI-ProteinID:
YP_010087596
RS:
NC_055561
UniProt:
A0A455JKX6
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All DBs
Position
NC_055561:complement(92862..95012)
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AA seq
716 aa
AA seq
DB search
MAECERVVSERVLNLAGLARDRGAPGPPAGWVRIHPTPRTRLFKEILLGELGYTEGQGVY
SAVRCTETVVRQVQATILGATLNAARYEDVARDWRAYTRARGLRAADIAARYGAAGEAEA
VRIAEHVFETWRRTLQMSLVECVRGVAAAFPAGGAGSPACFARYVDWLVCLGLVPLRRAS
PPPAAPRAPRAAAAAAAGGELARRLDVAGRVLAECEAFAAELLRCAGAVTILDYDRTEIL
YNFREKRFAVRDAVTGEEGECFVLWAPVWRGGDVLFESPMQRLHGEVLACHALREHARLC
QLLNTVPLRVLVGRRAEGAAGEGAPGAPSVEKLLGEGEDAGASSSAARLIKLIVNMKGMR
HIGDISETVRSYLDDTAAGLFDVSDVDTSQPGFGAAGGRRAAAGGQQIQDAFRASVVHSI
NGMLEGYVSNLFKTIESLKGANRDLADRLRASERELQAARERALLAAQRAADAARGGPGA
AGGRGPPSAGSADGGLGHEVIDISGLMGPDSYIANSFQSRYVPAYADDVERLSRLWEQEL
LRCFKLARTANNQGQEVSVVYSNSSISLILAPYFFSVLRVRRFGFLIAHQEACRSEEELC
GAVFKKTRLETYLAELAAIFTADARRALQLAPEPRGARERSETRSRSRSRSRSRSRSRSR
SRARRREREEERGRGRRWDGRGARRPRAGPAPRELDAGEPAAGRARGPGGAAAGAR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtgcgagcgcgtcgtctccgagcgcgtcttaaacctggccggcctggcacgt
gaccgcggcgcgccgggcccgccggccgggtgggtgcggatccacccgacgccgcgcacg
cggctcttcaaggagatcctgctgggggagctgggctacaccgagggccagggcgtctac
agcgccgtgcgctgcacggagaccgtggtccggcaggtgcaggccaccatcctgggcgcg
acgctgaacgccgcgcgctacgaggacgtggcgcgggactggcgcgcctacacgcgcgcg
cgcggcctgcgcgccgccgacatcgcggcgcgctacggcgccgcgggcgaggcggaggcg
gtgcggatcgcggagcacgtgttcgagacctggcggcgcacgctgcagatgtcgctcgtc
gagtgcgtccgcggcgtcgcggccgccttcccggcggggggcgccggcagcccggcctgc
ttcgcccggtacgtggactggctcgtgtgcctggggctggtgccgctgcggcgcgccagc
ccgccgcccgccgcgccgcgcgcgccgcgcgccgccgccgccgccgcggcgggcggcgag
ctggcgcgccgcctggacgtcgccgggcgggtgctggccgagtgcgaggccttcgcggcg
gagctcctgcgctgcgccggggccgtgaccatcctcgactacgaccgcaccgagatcctc
tacaacttccgcgagaagcgcttcgccgtgcgcgacgccgtcactggcgaggagggcgag
tgcttcgtgctgtgggcgcccgtgtggcgcggcggcgacgtcctcttcgagtcgcccatg
cagcggctccacggcgaggtcctggcctgccacgcgctgcgcgagcacgcgcggctctgc
cagctgctcaacaccgtgcccctgcgggtgctcgtgggccggcgcgcggagggcgccgcg
ggggagggcgcgccgggcgcgccctccgtggagaagctgctcggcgagggcgaagacgcg
ggcgcgtcctcctcggcggcgcggctgatcaagctcatcgtcaacatgaagggcatgcgg
cacatcggcgacatctcggagaccgtgcgctcgtacctggacgacacggccgccgggctc
ttcgacgtctcggacgtggacacctcgcagccgggcttcggcgcggcgggcggccgccgc
gcggccgcgggcgggcagcagatccaggacgccttccgggcgtccgtggtgcacagcatc
aacgggatgctggagggctacgtcagcaacctcttcaagaccatcgagtcgctcaagggc
gccaaccgcgacctggccgaccggctccgcgccagcgagcgcgagctgcaggcggctcgg
gagcgcgcgctgctggccgcccagcgcgcggccgatgccgcgcgcggcgggcccggggcc
gccggcgggcgggggccgccatccgcgggctccgcggacggggggctggggcacgaggtc
atcgacatctccgggctcatgggcccggactcctacatcgccaacagcttccagtcgcgg
tacgtgcccgcgtacgccgacgacgtggagcggctctcgcggctgtgggaacaggagctg
ctccgctgcttcaagctggcccggacggccaacaaccagggccaggaggtgtcggtcgtg
tactcgaacagctccatctccctgatcctggcgccgtacttcttctccgtgctgcgggtc
cggcgcttcggcttcctgatcgcgcaccaggaggcgtgcaggtcggaggaggagctctgc
ggggcggtctttaaaaaaacgcgcctggagacgtacctcgcggagctcgcggcgatcttc
acggccgacgcgcgcagagcgctgcagctggcgccggagccgcgcggggcccgggagcgg
agcgagacccgcagccgcagccgcagccgcagccgcagccgcagccgcagccgcagccgc
agccgcgcgcgccgccgcgagcgcgaggaagagcgcggccgcgggcgccgctgggatggc
cgaggcgcgcgacggccccgcgccgggcccgccccccgagagctcgacgctggagagcct
gctgcgggacgcgcgcgagggcccgggggggccgccgcaggtgctcgatga
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