KEGG   Viruses: 65246746
Entry
65246746          CDS       T40000                                 
Symbol
KM571_sLgp1
Name
(RefSeq) Cacao virus; RNA-dependent RNA polymerase
  KO
K26694  Phenuiviridae RNA-directed RNA polymerase L [EC:2.7.7.48 3.1.-.-]
Virus
629730  Cacao virus
SSDB
Motif
Pfam: Bunya_RdRp L_PA-C-like L_protein_N
Other DBs
NCBI-GeneID: 65246746
NCBI-ProteinID: YP_010086098
RS: NC_055325
UniProt: A0A4P8D7R8
LinkDB
Position
NC_055325:19..6291
AA seq 2090 aa
MNRILETQPDLNYGYNCGALIHYDCTLFNLELPNFEVTKQIGSIQIDLDPASHSAVSTVG
STLETRMTITDNKLCNIVHDITVGHLTPITDCMFCSVFEVKGDGFDNHSPDMILETGPDS
YYVIEFTTNRGGEQSARTAALNKIAKYEIPCQNRSSGVSIKLGVISVHRDGVWSNMNLGD
EDVNELVYRYRLALDVFSDISIRCPDLLDEDGDSQKTKRELNGIISLISMDWERTESAFP
MFKKEVIESFGGYSSDSDYISRIVSKSLKECHDDLIKSSFFDENLTHEERLMRNLQDCED
KISTYREEYMKSDLMREINDSKSTIQIPGWVTSEGPEGKNLKGLGDFSISGSHPMCKIWD
RVCRCAATEEIERMYDDPDAELEFAMSDQRERSDERNKYHRVRLDISREEEDYIATLGVC
AKSKRDNHQVELSRLRSKKAFSLNHDISALEEFLNTRDRSVFEPSEETYCPLLQDLELRA
ESMTIHQPRLFTEKGTNEFLENYISFMKSPLGSWSQMVSLIGAELSASVKQHVKHSSYVV
KRLLNSSVYLLIKPTNSKSHIFVSFAVEKDRLIANLDNSTVFKQCIDGGDILITDFVSYK
LSKLTNLCKTSSLLYCALCFWTETHCFSPWDSVKVAYNERSPGGHEVRFMTKLSLLTLLE
DKATTEELQTMLRYVIMEGFVSQPEIPKPQKMMSKLPTIMRSELQVFLLTRVFLTMRRIS
SKPFLLIKNGSRISWSQLFNPFTQSSVRDVQPVINCCYNGYFKNKEEETEPSVLSKMYKK
IIELEDCCPKDDMYLGMGDPEDPKMHEFSRSYLKECVDHAKQLLSRIHGQNFMQMIEDQI
VREVSQITLERLATLKATSNFNNGWYNYKEVKDKNYTRDKLIVKMSQFANEGSSLAIQKF
EECMTRIEEKKCMEICLFKKQQHGGLREIYVMGADERIVQSIVECISKTIGKFFPSDTLC
NPSNKTKIPETHGMRARKHCEGSVWTCSTSDDARKWNQGHFVTKFAMMLRSFTTPKWWPI
ITRGCSMFTRKNMMMNLSFMRILDCHTELKTSDEFSTTLFKAYHGEITVPWFHPGCTYLT
TKTGMMQGILHFTSSLLHTIHQEYIRSLSFKIFNSKVHPEMSYKMVCDMMQGSDDSSMMI
SFPSKDESLIAKCKVAAALCFRMKKKLGIYLGIYPSEKSTSNTDFVMEYNSEFYFHSQHV
RPTIRWIAASCSLPEVETLVARQEEASNLLTSVTEGGGSFSLAACIQHSQCLLHYMLMGM
GVSELFKEYSKAIVRWKDPGLGFFLFDNPYAAGLPGFRYNLYKVVTTTNLQKIYAHFLKK
VRSREEDDALIPETCSVSPGGALILSSALKWGSRQKFLKLRSRLHIPDDWVEQINEHPSV
LYRAPSTGNEIILRIAEKVHSPGVVSSLSSGNAVAKVMASSVYFLSAAIFEDAGRPEYSF
TGDQKYSLLHKMALYNGFSGYGDIDDEDILFLFPNVSEYQQLDSIIYNKSNIEFIVRINQ
RENTQTKITIFDQHSSLKISPEKLVSDKWFGTQKSKIGLTALDNEWHKLKTIVGWLRDTP
EQTLENSPFRSHVQIRNFFARMEVKPRSVRITGAPVKKRSGISKLSLVIRDNYARNGYLK
GIEDIEGVERSNAAEVAKHFLFGILAGPYNTETKEQLVIKSLSILPEVSLKESDRKTKSN
LISILQNWCSGNGGTSQLIEEVGAGIIGGFVLPQKCKINNGKVEYYGEGIWRGFMDGCQT
QIEIYNSIGLPPHIRSITVTDKSSIWELSAALRSWCEDIGAFNGVDYSKTASKKGLKYWM
HDFKPYGLDKPFGVPVYVVRGDMVKEFDVSEDQIRLKVRRSTINLYVKESNRDIHILSYT
AGDNDLSPVAVNRTRSQQVKAALELFSKEPSSSWMRCSSIPIMFINKLLEISESKLNIGT
LDSDRLRHIMKTCTESSLRSRVGNVFQNVPGSSDAPQVFDLDSVINIMIEDMAGDMFTSI
AKDIEVDLQEAYSNEEFDFTDIDLFGPAHFKEVTDLTMISHPLMDEFIDFLISNVGRKKI
RKALQTLRCARRDMILLKQLLRCLCMDPNSLREEYQLEDIECEVDDDMIG
NT seq 6273 nt   +upstreamnt  +downstreamnt
atgaacagaattctcgaaacgcaaccggatctgaactacgggtacaattgtggagccctt
attcattatgactgcacgttgttcaacctggagcttccaaatttcgaagttacaaagcag
ataggctcaatccaaatagacttggatcctgcctctcactcagccgtctcaactgttggt
tcaacactggagacgagaatgaccataacagacaacaagctttgcaatatagtccatgat
attactgttgggcatttgacccccataacagactgcatgttttgcagtgtatttgaagtg
aaaggtgatggctttgacaaccatagtccagacatgatactagagacaggaccagatagt
tattacgtcattgagttcacaacaaatagaggaggtgaacaatctgcaagaacagcagct
cttaataaaatagctaagtatgaaataccatgtcaaaacaggtcatctggggtctcaatc
aaacttggagtaattagtgtacacagagatggagtgtggtcgaatatgaatctgggggat
gaagatgtcaatgagcttgtatacagatataggcttgccttagatgtcttctcagacata
tctattcgatgcccagatcttcttgatgaagatggtgactcacaaaaaacgaagagagag
ttgaatggaataatctcactaattagcatggactgggagaggactgagtctgcttttccc
atgtttaagaaagaagtgatagagagttttggtggatattcttcagattcagattacatt
tcaaggattgtctctaaatcattaaaagaatgtcacgatgatctcatcaaatcatcattt
ttcgatgagaacctaactcatgaagaaaggttgatgagaaaccttcaggactgtgaggat
aagatttctacttacagagaagaatacatgaaatctgatctaatgagagaaattaatgat
tcaaaatcaacaattcagattccaggatgggtcacatcagaaggtccggaaggtaaaaat
ctgaaaggtcttggtgatttttccatctcagggtctcatccaatgtgcaagatctgggac
agagtgtgcaggtgtgcagcaacagaggagattgagagaatgtatgacgatccagatgca
gaattggagtttgcaatgtctgaccaaagggagagaagtgatgagagaaacaaatatcat
agagttaggcttgacatcagcagagaagaggaagactatattgcaacacttggtgtttgc
gcaaaatcaaagagagacaatcaccaggtagagctgagccgactgcggagtaagaaggcc
ttttcactgaatcatgacatttctgcattagaggagtttctaaacacaagagatcgatca
gtctttgaaccatcagaagaaacatattgcccattgcttcaagatcttgagcttagagca
gaatcaatgacaattcatcaacctagacttttcactgagaaaggaacaaatgaatttctt
gagaattacatttcattcatgaaatcacccttgggatcctggtctcagatggtgagccta
attggggctgagctctctgcgtcggtgaagcagcacgtgaaacactcctcttatgttgta
aagagattattaaattcatcggtttacttgttaataaaaccaacaaactccaaaagtcat
atatttgtgtcttttgcagttgagaaggacagattgattgcaaatctggacaactcaact
gtttttaaacagtgtatagatgggggtgatatattaataactgactttgtctcatacaag
ctaagcaaattaacgaacttgtgtaagacttcatctctcttatactgtgcactttgcttc
tggactgagactcactgcttttctccctgggattccgtaaaagttgcttacaatgagagg
agccctggcggtcatgaagttaggttcatgacaaaactctcattattgaccttattagaa
gataaggctacgactgaagaactacaaacaatgctgagatatgtcatcatggaagggttt
gtttctcagccagagatacctaagcctcaaaagatgatgtcaaaactgcccacaatcatg
agatctgaactacaggtttttttgttgactagagtgtttctgactatgagaagaatatca
tcaaagccattcctactaatcaagaatggcagcagaatatcttggtctcaattgttcaac
ccctttactcaatcatcggttagagatgtacagccagtgataaactgctgttataatgga
tattttaagaacaaggaagaggagactgagccttcagtgttgtccaaaatgtataaaaag
ataattgaacttgaggactgctgtcccaaggatgatatgtatctaggaatgggagatcca
gaagatcctaagatgcatgagtttagtaggagttatctaaaagagtgtgtggatcatgca
aaacaattgctgtcaagaattcatggacagaatttcatgcaaatgattgaggatcagatt
gtgagagaagtatcacagatcacccttgagagattggcgacattaaaggccacaagtaac
ttcaataatggatggtataactataaggaagtaaaagacaagaactacactagggataag
ttaatagttaaaatgtcacagtttgctaatgagggcagttccctggcgatacagaaattc
gaggaatgcatgacaagaatagaggagaagaaatgtatggagatctgcctattcaaaaaa
caacagcatggaggactcagagaaatttatgtgatgggtgctgatgagagaattgtccag
tctatagtggaatgtatatctaaaacaattggaaagttcttcccttcagatactctatgc
aatccatcaaataaaacaaaaatacctgagacccatgggatgagggctagaaaacactgt
gaaggatctgtttggacatgttctacatcagatgatgctaggaagtggaatcaaggacat
tttgtcaccaagtttgcaatgatgctcaggagcttcactacacctaagtggtggcctata
ataactagaggatgctcaatgttcactaggaagaacatgatgatgaatctcagtttcatg
aggatcttggactgccatacagaactcaaaacatctgatgaattttccaccaccttattt
aaagcgtatcatggtgagataacagttccttggtttcatccaggatgcacctacctgacc
acaaaaacaggcatgatgcagggaatactacactttacttcatcactcttgcacacaata
catcaagaatatataaggtcactctcattcaagatttttaactcaaaagtccatcctgaa
atgtcatataagatggtgtgtgacatgatgcaaggatccgatgatagtagcatgatgatt
agttttccaagtaaggatgaatctttgattgcgaaatgcaaagttgcggcagcactgtgt
tttagaatgaaaaagaagttaggaatctatcttggcatatatccctctgaaaagtcaaca
tctaatacggattttgtgatggagtataattcagagttctactttcattctcagcaygtg
agaccaacaattagatggatagctgccagctgtagccttccagaggttgagactcttgtg
gctagacaggaagaggcatcaaacttattaacctcagtcacagaaggagggggctcattc
tcacttgcagcatgcatacaacacagtcaatgtctattgcactatatgttgatgggtatg
ggtgtctcagaattatttaaagagtactctaaggccattgtgagatggaaagacccagga
ctgggattctttctatttgacaatccttatgctgcagggttgccaggatttaggtataat
ttatacaaagtcgtcactacaactaacctgcagaaaatatatgcacattttctgaagaaa
gtcaggagtagagaagaggatgatgccttgataccagagacctgcagtgttagtccaggt
ggtgccttaatattaagctcagcactaaaatggggatccagacagaaattcttaaaattg
agatctagacttcacataccagatgactgggtggaacaaataaatgagcatccatcagta
ctttatagagcaccatccacaggaaatgaaataattctaagaatagctgagaaagtccac
agtcctggagttgtgtcctcattatcatcaggaaatgctgttgctaaggtgatggcatct
tcagtgtatttcctgtcagcagctatttttgaagatgcaggaagacctgagtacagcttt
actggagatcaaaaatacagtttgctacacaagatggcactttacaatggttttagtggc
tacggcgacatagatgatgaagatatattgtttctgtttcctaatgtctcagagtatcag
cagttggattccataatttataacaaaagcaatattgaatttattgttagaataaaccag
agggagaatacacagaccaagataacaatctttgaccagcactccagcctaaagatatcg
ccagagaagttggtgtctgataaatggtttggaactcagaagagcaagattggattaaca
gctttagacaatgagtggcataagcttaagacaattgtgggatggttgagagacacgcca
gaacaaaccctagagaactctccctttagaagtcacgttcagataaggaatttctttgct
aggatggaggtaaaacccagatctgttagaataacaggagccccagttaagaaaaggtca
ggaatcagtaagttatctttagtaattagagacaattatgctagaaatggataccttaaa
ggtattgaagatattgagggagtggaaagatcaaatgctgcagaggttgcaaagcacttc
ctatttggaatcctcgctggaccctacaacacagaaactaaagagcaattagtcattaag
tctctgagcattcttccagaggtgtcactgaaggaatcagacaggaaaacaaagtctaat
ctaatctctatacttcagaattggtgttctgggaacggagggacctcgcagctcatagaa
gaagtgggagcaggcatcattggaggctttgtgcttcctcagaaatgcaagatcaataat
ggaaaagtagagtattatggagaagggatatggagaggcttcatggatgggtgtcagaca
caaatcgaaatctacaattccataggattacctcctcatattaggtcaataacagttacg
gacaaatcgtctatatgggagctatcagcagcactaagatcctggtgtgaggacattggt
gcctttaatggtgttgattactctaagacagcctcaaaaaaaggtcttaagtattggatg
catgactttaagccttacggactagacaagccttttggagttcctgtttatgtagtgaga
ggggacatggtcaaggaatttgatgtttcagaagatcagataagacttaaagttagaaga
tcaacaatcaacctgtatgtgaaagagtctaacagagacatacacattttatcatacaca
gcgggagataatgatttaagcccagttgcggtgaatagaacaagatcacaacaggttaaa
gcagccctcgagctattctcgaaagagccaagttctagctggatgagatgctcatccata
cctataatgttcataaacaagttgctggaaatatctgagtcaaaacttaacattggcacc
ttggattcagataggctgagacatatcatgaagacctgcacagagtcatcactcagatct
cgggttggaaatgtatttcagaatgtgccaggatcatctgatgctcctcaagtttttgat
ctcgactcagtaatcaacataatgatagaagatatggctggagacatgttcactagcata
gcaaaggatatagaagtggacttgcaagaagcatactcaaatgaggagtttgacttcact
gacattgatctgtttggaccagcacacttcaaggaagtaacagatcttacaatgatatca
catccattaatggatgagtttattgatttcttaatatctaatgttggcagaaagaaaata
aggaaagcacttcagacacttagatgcgcaagaagagatatgattttactgaagcaatta
ctaagatgtctatgcatggacccaaactcactaagagaagaatatcagcttgaggacatt
gagtgtgaagtggatgatgacatgatcggttga

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