Viruses: 65246767
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Entry
65246767 CDS
T40000
Symbol
KM560_sLgp1
Name
(RefSeq) Alstroemeria necrotic streak virus; L protein
KO
K26280
Tospoviridae RNA-directed RNA polymerase L [EC:
2.7.7.48
3.1.-.-]
Virus
693450
Alstroemeria necrotic streak virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Bunya_RdRp
L_protein_N
Motif
Other DBs
NCBI-GeneID:
65246767
NCBI-ProteinID:
YP_010086064
RS:
NC_055298
UniProt:
A0A3B8DZR5
LinkDB
All DBs
Position
NC_055298:complement(107..8731)
Genome browser
AA seq
2874 aa
AA seq
DB search
MNIQKIKNLIENGTTLLLSIEDCVGANHDLASDLHKRNSDEIPEDVIINNNAKNYETMRE
LIVKITADGEGLNKGIATVDIKKLNELVSLFEQKYLETELSRHDIFGELVSRHLRIKPKQ
RSEVEIEQALREYLEELNKKQCVNKLSDDEFKKVNKEYVATNATPDNYVIYKESKNSELC
LMIYDWKISVDARTETKTMEKYYKNIWKSFKDIKVNGKPFLEDHPVFVTIVILKPIGGMP
ITVTSGRVLGKFEDSSSALHGERVKLAKNAKLLNIYHVGQIVGTTPTIVRNYYANTQKIK
YEVRGILGDDFGSRDVFFSHWTSKYRERNPTEIAYSEDIEKIIESLATEEIAKEEIIHFL
FGNFCFHIETMNDQHIADKFKGYQDACINLKIVPKVDLADLKDHLIQNQKTWDSLYGKHL
EKIMSRVREKKKKEKEIPDITSAFNQNAIEYEEKYPGCFTSDLSETKTNFSMTWSPSFER
VELSPEIDYNNAIIKKFRESFKSTSRIVYNSPYSSVNNQTNKARDITNLVRLCLMELSCD
TTGLNKQELEDEIDINTGSIKTERTKKSKEWYKHGSCLTRNKNEFCMKDTGRENKAIYFK
GLAGMNVGMSSKKRVIKKEEMKERISKGLEYDTSVRQADPNDDYSSVDMSSLTHMKKLIR
HDNEDSLSWCEKIKDSLFVLHNGDIREEGKIAAVYNNYAKNPECLYTQDSVLKTELETCK
KINKLCNDLAIYHYSEDMMQFSKGLMVADRYMTKESFKILTTANASMMLLAFKGDGMNTG
GSGVPYIALHMVDEDMSEQFNICYTKEIYSYFHYENKYVYIMRPQRLNQVRLLSLFKSPS
KVPVCFAQFSKKANELEKWLKNKDIEKVTVFSMTMTVKQILINIIFSSVMIGTVTKLSRM
GIFDFMRYAGFLPLSDYSNIKEYIRDKFDPDITNVADMYFVNGIKKLLFKMENLNLSTNA
KPVVVDHENDIIGGITNLNIKCPITGSTLLTLEDLYNNVYLAIYMMPKSLHNHVHNLTSL
LNVPAEWELKFRKELGFGIFEDIYPKKEMFDDRDLFSINGALNIKALSDYYIKNIDNVGL
MRSEIENKEDFLGPCYRITTLKSSKKCSQSNIISTDEIIECLQTAKIQDIENWKGSTLAI
IKGLIRTYNEEKNRLIEFFEDNCVNSLYLVEKLKEIIANGSLTIGRSVTSKFIRNNHPLT
VETYLKTKLYYRNNVTILKSKKVSEELYDLVKQFHNMMEVDIDSIMNLGKGLEGKRHTFL
QMLEFVISKAKNVTDSIDFLVSVFEKMQRTKTDREIYLMSMKVKMMLYFIEHTFKHVAQS
DPSEAISISGDNKIRALSTLSLDTITSYNDILNKSPKKSRLAFLSADQSKWSASDLTYKY
VLAIMLNPVLTTGEASLMIECLLMYVKLKKVCIPTDIFLNLQRSQGTFGQNETAIGLLTK
GLTTNTYPVSMNWLQGNLNYLSSVYHSCAMEAYHKTLECYKNCDFQTRWIVHSDDNATSL
IASGEVDDMLSNFSSTSLPEMLFRSIEAHFKSFCITLNPKKSYASSSEVEFISERIVNGA
IIPLYCRHLANCCTESSHISYFDDLMSLSIHVTMLLRKGCPNEVIPFAYGAIQVQALSIY
SMLPGEVNDSIRIFQKLGISLKSNEIPTNMGGWLTSPIEPLSILGPSSNDQIIYYNVIRD
FLNKKSLADVKDSVSSLDYLQMRFRELKERHEKGTLEEKDKKMIFLINLFEKASVSEDSD
VLTIGMKFQTMLTQIIKLPQFINENALNKMSSYKDFAKLYPNLKKNEDLYKSTKNIKINE
DSILEEDELYEKISSSLEMESVHEIMIKNPETILIAPLNDRDFLLSQLFMYTSPSKRNQL
SSQSTEKLALDRVLRSKAKTFIDIDSHLKMTYEENMEKKALEMLEFDPDSYCSFKTCVNL
VVKDVNFSMLTPILDSAYPCESRKRDNYNFRWFQTEKWIPVVEGSPGLVXMHAVYGSNYI
ENLXLKNIPLTDDSINVLTSTFGTGLVMEDVQSFVSGKSSFETEAFTNANNCQRLVKSCN
YMITAQNRLLAINTCFSRKSFPFYSKFNLGRGFISNTLALLSTIYSKEESYHFVSTASXK
LDKTIRTVMNAQQDMNLEKILDTAVYISDKLQSLFXTITREDIALILQNVCLDSKPIWQS
LDEKMKKINNSTRHGFTVSNVILSHNSELNTIQKQIVWMWNMGLCSDRTLDFIIRYIRRS
DVRYVKTEEQDELGNYVSGTMYKIGIMTRSCYVQLIASDQDIAVSLRTPFEILNERDFLF
DTYRESIEKLLQKFMFDKVNIIKSKQTQIVFLEPGDACIRMTTDNKMIVKVNATPRQIRL
ENVKLVVKIKYENINSDVWDIIESQKALVLRLPEVGECFSDMYKTVDSETEAIKTIKSSL
MTSLTFIETFGNLSRQINEIVDDTIRETMHDFLMNIRDTCLEGLENCRSMEEYDSFLDDN
GFDDTVELFEDLLRTQDSFENEYSSLFSEIVNKAKKYTKDLEGFKEILLMLKYSLINDAS
GFKSYRATGANAVELTAKKHIEVGEFNLLGMIQLIKACETCHNNDSILNLASLRNVLSRT
YATFGRKIRLDHDLDLQNNLMEKSYDFKTLVLPEIKLSDLSKEILKENGFIISGENLKID
KSTDEFEGLANFNMLRLDEEEMYEGLIKEMKIKRKKKGFLFPANTLLLSELIKFLIGGIK
GTSFDIETLLRNSFMPDIFSTDRLGRLSSSVPALRVYSTVYMEYRNVNCPLNEIADSLEG
YLKLTKSKAKEQFLEGRIKKALIQLRDEQSRSKKLGVYKDIAGFLSRHPLCLSEKTLYSR
YTYHDINDYIMQTREIILNKISELDDIEEADEDNFLLNYLKGEEDAFDEEEETD
NT seq
8625 nt
NT seq
+upstream
nt +downstream
nt
atgaacatccagaaaataaagaatttaatagaaaacggaaccactttattattatccatc
gaggactgtgtcggtgctaatcatgatttagcctcagacctacacaaaagaaatagtgat
gagatccccgaagatgtaataatcaataataatgcaaaaaattacgaaacaatgagagag
ttaattgtgaagatcactgctgatggggaagggttaaacaagggaattgctactgtagac
ataaaaaagctaaacgagctagtgtctttatttgaacagaaatatttggaaacagaactt
tcaaggcatgacatctttggcgaattggtttctagacatctgaggataaaaccaaaacag
aggagtgaagtggaaattgagcaggcactcagagaatatctggaagaactcaacaaaaaa
caatgtgtgaacaaactttctgatgatgaatttaagaaagtgaacaaagagtatgtagct
accaatgctacaccagacaactatgtcatatacaaagagtcaaaaaacagtgaactatgt
ctgatgatttatgattggaagatctctgtagatgccagaacagagacaaaaaccatggaa
aaatattataaaaacatatggaaatctttcaaagacataaaagtcaatggaaagccgttt
ttagaagatcaccctgtctttgttacaattgtgatactgaaacctattggagggatgccc
ataacagtaactagcggaagagttctggggaaatttgaagattcatcttcagcattgcat
ggagaaagagtaaaacttgccaagaatgccaagttgttgaatatttatcatgtaggccaa
attgtagggacgacacctactattgtgagaaattattatgcaaacacccaaaaaattaaa
tatgaagttagaggcatcttgggggatgattttggatccagagatgtgtttttcagccac
tggacctccaagtatagagaaagaaatccaacagagatagcttattctgaagatattgaa
aagataatagaatctctggcaacagaggaaattgcaaaagaagagataatccactttttg
tttgggaatttttgtttccatattgagaccatgaatgaccagcacattgcagataaattc
aaaggataccaagatgcttgtatcaatttaaaaattgttcctaaagttgatttggcagat
ttgaaggaccacctgatacaaaaccagaaaacatgggattctttgtacggaaagcatcta
gaaaagatcatgtcaagagtaagagagaaaaagaaaaaagagaaagaaataccagatata
acaagtgcttttaaccaaaatgctattgaatatgaagagaagtacccaggttgcttcact
agtgatctgtctgaaacaaaaaccaatttctctatgacctggtccccaagtttcgaaaga
gttgaattaagcccagagattgattacaacaatgcaattataaagaaatttagggaaagc
tttaaaagtacatcaagaatagtttataacagcccgtatagctctgtaaataaccagacc
aataaagctagggatattacgaatcttgtacgcctgtgcttaatggaactgagctgtgat
acaacagggttaaataagcaagagcttgaagatgaaattgatataaacactggaagtatc
aaaaccgagagaacaaagaaatctaaggaatggtacaaacatggctcatgtttaacccgg
aataaaaatgaattctgtatgaaagatacaggaagagagaataaagcaatttatttcaaa
ggtttggcagggatgaatgtagggatgagctcaaaaaagagagtcataaagaaagaagag
atgaaagaaagaatttcaaaaggattagagtatgacacatctgttcgacaggccgatcca
aatgatgattattctagtgtggacatgtcttcgttgacccacatgaagaagctgataagg
catgacaatgaagacagcttgagctggtgtgagaagatcaaagattctctatttgtactt
cataatggcgatattagagaagagggtaaaattgctgcagtttataacaattatgccaag
aatccagaatgcctgtacactcaggattctgtgcttaaaacagaactagagacttgcaag
aaaataaacaagctgtgtaatgatctagcaatataccattactcagaagatatgatgcaa
ttttctaaaggcttaatggtggcagataggtatatgactaaagaaagcttcaagatctta
acaactgctaacgctagcatgatgctacttgcattcaaaggagatggaatgaacacaggg
gggtcaggggttccttacatagcattgcatatggttgatgaagatatgtcagagcagttt
aacatatgctacacaaaagaaatttatagttatttccactatgagaacaagtatgtttat
ataatgagacctcagagactgaaccaggtcaggttacttagtctctttaaatcacctagt
aaagtcccggtgtgttttgctcaattttcaaaaaaagcaaatgaattagaaaagtggttg
aagaataaagatatagaaaaagttactgttttttctatgactatgacagttaaacaaata
ttgataaatataatcttttcctctgtgatgataggaactgtgacaaagcttagcaggatg
ggaatttttgattttatgagatatgctggttttctaccattgtctgattactctaacata
aaagagtatataagagataaatttgacccagatatcactaatgtagctgacatgtacttt
gtgaatggaataaagaaattgcttttcaaaatggagaatttaaacctgagtacaaatgca
aaacctgttgttgtagaccatgaaaacgacattatcggagggataacaaatttaaacatt
aaatgtccaataactggatcaactttgttgactttagaagatttgtacaacaatgtttat
ctagccatttacatgatgccgaaatctttacacaatcatgtgcacaatttgacaagtttg
ctgaatgtccctgctgaatgggaattgaagttcagaaaagaactcgggtttggaatattt
gaggatatataccctaagaaagaaatgtttgatgacagagatctattttccataaatggt
gctttaaacattaaggcattatctgactattatatcaagaatattgacaatgtgggcttg
atgagatcagaaattgagaataaagaagattttcttggtccatgttatagaataacaact
ttgaaatcatctaaaaaatgctcacaatcaaatataataagcactgatgaaataatagag
tgtcttcagactgcaaagatccaagacatagaaaattggaaaggaagcacattagcaatt
ataaaaggactaatcagaacatataatgaagaaaaaaacagactgattgaattttttgaa
gacaattgtgtcaactcgttgtatcttgtagaaaaactgaaagaaataatagccaacgga
tcattaactatagggaggtcagtgacttcaaaatttattaggaataaccaccctttgaca
gtggaaacatatctgaaaacaaaactttattatagaaacaatgtgacaatcttaaagtct
aaaaaagtatctgaggagctctatgatctagtcaagcaattccacaatatgatggaagtg
gacatagattcaatcatgaatttggggaaaggtttggaaggaaaaagacacacgttcttg
cagatgttagagtttgtcatatcaaaagcaaagaatgtcactgattctatagatttctta
gtctcagttttcgaaaaaatgcagagaacaaaaactgatagagaaatatatctaatgagc
atgaaagtaaaaatgatgctttatttcatagagcacacattcaagcacgtagcacagagt
gatccgtctgaagctatatcaataagcggagacaacaaaataagagcactttcaacttta
tctctagacacaatcacttcttacaatgacatcttaaataaaagtccaaaaaaatcaaga
ctggcatttctctctgcagatcagtcaaaatggtcagcatcagacctcacttacaaatat
gtcttggctataatgctcaatccagttttgaccactggtgaagcaagcctcatgatagaa
tgcttgttaatgtatgttaagctaaagaaagtttgtatacccaccgacattttcttgaac
ttgcagagatcccaaggaacttttggacaaaatgaaactgctattggacttctgacaaag
ggtttaacaacaaacacatatcctgttagcatgaactggctccaagggaacctgaactat
ctatcttctgtttaccactcctgtgctatggaagcttaccacaaaactttagaatgctac
aaaaactgtgatttccaaactagatggatcgtgcattctgatgacaatgcaacatcacta
atagccagtggtgaagttgatgatatgttgtctaatttttcaagcacttctttaccagag
atgctatttcgaagcatagaggctcattttaagagtttttgcataactttgaacccaaaa
aagagctatgcttcatcttcagaagttgaatttatatcagaaagaatagtcaatggtgcc
ataattcctctttactgtaggcatctggcgaattgttgtacagaatcttcccatataagt
tatttcgatgacttgatgtcattaagtatacatgttaccatgcttctaagaaaaggttgc
cctaatgaagtcataccatttgcttatggagcaatccaggtacaagctttgagcatctat
tcaatgcttcccggcgaagttaatgatagtataagaattttccagaaactaggtattagt
ctaaaatcaaatgaaatccccacaaatatgggaggttggctgacttcgcctatagaacca
ttgtccatacttggaccttcatctaatgatcagatcatttattataatgtaataagagac
tttttaaataaaaagagcttagcagatgtcaaagacagtgtctcatctctagattatctt
cagatgaggttcagagagctaaaagaaagacatgaaaaaggaacactagaagaaaaagat
aaaaagatgatcttcttgataaatctctttgagaaagcatctgtttctgaagactcggac
gttttgacaattggaatgaagttccaaaccatgctgacccaaatcataaaacttcctcag
ttcataaatgaaaatgcgctaaacaaaatgtccagctacaaagattttgccaaactttat
cctaatttaaagaagaatgaggacttgtacaaaagtacgaaaaacataaaaatcaacgaa
gattcaattttggaagaagacgaactatatgaaaagatttcttccagcttagaaatggaa
tccgttcatgagataatgataaaaaaccctgaaacaattctaatagccccattgaatgat
agagatttcttgctcagccagttgttcatgtacactagtccttctaaaaggaatcagcta
tcaagccagtcgactgaaaaacttgctttagacagagttttaagatctaaagccaagact
tttatagacattgactctcatctaaagatgacttacgaagaaaacatggaaaagaaagct
ttggagatgttagaatttgatcctgattcatactgttcttttaagacatgtgttaatctt
gtggttaaagatgtaaatttcagcatgctgactcctatactggactctgcatatccttgt
gaatctagaaaaagggataattacaatttcagatggtttcaaacagagaaatggattcct
gttgtcgaaggctctcctggattagttrtgatgcatgccgtttatggatcaaactatata
gaaaacctggktttaaaaaacattccattgacagatgacagtatcaatgttttaacaagc
acatttgggacaggacttgtcatggaggatgtgcaatcctttgtctctgggaaaagcagt
tttgaaacagaagctttcacaaatgccaacaactgccaaagattagtaaaatcatgcaat
tatatgataacggctcaaaataggctactagctatcaacacatgtttttctaggaaaagt
ttccccttctattctaaattcaatcttggtagagggtttatttcaaacactctggcactt
ttgtcaactatttatagtaaagaggaatcttatcatttcgtctctactgctagttrcaaa
ctggacaaaaccatacggacagtgatgaacgctcagcaagatatgaatttagaaaaaatc
ctggacacagctgtgtatatttctgataagctacagtctcttttcycaactatcactaga
gaggacatagctctcatactccaaaatgtgtgtttggatagcaaacctatatggcaaagc
ttagatgaaaaaatgaagaaaatcaataactcaacaagacatggatttacagtatccaat
gttatactgtctcacaatagtgaattgaatacaattcagaagcaaatagtttggatgtgg
aatatgggattatgttctgatagaacacttgatttcataataaggtacatcaggagaagc
gatgtaaggtatgtaaaaactgaagagcaagacgagctaggaaactatgtttctggtacc
atgtataaaataggcataatgactagaagctgttatgtccaattaattgcctcagaccag
gatattgcagtttctctcagaacaccttttgagatcttgaatgaaagagattttcttttt
gacacatatagagaaagcatagagaaattgctgcaaaaatttatgtttgacaaagtaaac
ataattaaatcaaaacaaactcagatcgtgttccttgaaccaggagatgcctgtataagg
atgaccacagacaacaaaatgattgtaaaagtcaatgcaacacctagacaaattagattg
gagaatgtcaaactggttgtgaagataaaatatgagaatataaactctgatgtatgggat
ataattgagagccaaaaagcactggtcctaagacttcctgaagtaggagaatgtttttca
gacatgtataaaactgtagattccgaaacagaggcaatcaaaacaataaaaagtagtctg
atgacttctttaactttcattgagacttttggaaatctatcaagacagataaacgaaatt
gtggatgatacaattagagaaacaatgcacgattttttaatgaatattagagacacttgt
ttggaagggttggaaaactgcaggagcatggaggaatatgatagctttctagatgacaat
gggtttgatgatactgtggaactctttgaagatctattaagaacacaagatagttttgaa
aatgaatatagctctctgttttctgaaattgtgaataaagcaaaaaaatatacaaaagat
ctagaaggtttcaaagagatattacttatgcttaaatattccttgataaatgatgcttca
ggtttcaagagctatagagctacaggagcaaatgctgtggaactgacagctaaaaaacat
atagaggtgggcgaatttaatctcttaggaatgatccagcttataaaggcttgtgaaacg
tgccataataatgattctatattaaacttagctagtttgagaaatgttcttagcagaaca
tatgccacgtttggaagaaagataagactagatcatgacctggatttacaaaacaatcta
atggaaaaaagttatgattttaagacattagttttgccagaaatcaagctttctgatcta
tccaaagaaatattgaaagaaaatgggtttattatatctggtgaaaacttaaaaatagat
aaatctactgatgagtttgaaggtctggcgaactttaacatgctaaggttggatgaagaa
gaaatgtatgaaggtctaataaaggaaatgaaaataaaaaggaagaaaaaaggttttttg
tttccagcaaacaccttgcttttgagtgagctaataaagtttttaattgggggtatcaaa
gggaccagttttgacattgaaacgttgctgaggaacagtttcatgcctgatatattttca
acagacagattggggaggttgagttcaagtgtgccagcattgagagtttattcaactgtc
tatatggagtacagaaatgtgaattgcccattaaatgagatagcagatagtttggagggt
tatttaaagctaacaaaaagtaaggctaaagaacaatttctagaaggcagaataaaaaaa
gctttgatccagttaagagatgaacaatctcgttctaaaaagctaggagtgtacaaagac
atagcaggcttcctgtccagacatccattgtgtctgtctgagaaaacactatacagtaga
tacacctatcatgatattaatgattacataatgcagacacgagagatcatattgaacaaa
ataagtgaattagatgacattgaagaagcagatgaagacaactttttgttgaattattta
aaaggtgaagaggatgcattcgatgaagaagaagaaactgattga
DBGET
integrated database retrieval system
