Viruses: 65246819
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Entry
65246819 CDS
T40000
Symbol
VP1_Pol, KM554_s1gp1
Name
(RefSeq) Rotavirus J; VP1
KO
K25309
Rotavirus RNA-directed RNA polymerase [EC:
2.7.7.48
]
Virus
1929964
Rotavirus J
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
RdRP_4
Motif
Other DBs
NCBI-GeneID:
65246819
NCBI-ProteinID:
YP_010086029
RS:
NC_055268
UniProt:
A0A1L6BXL2
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Position
NC_055268:7..3513
Genome browser
AA seq
1168 aa
AA seq
DB search
MDAADYLEWLSRSTVRNLAYTSLVYSNPKVAIVKINDENENFESVEQRQNSPSQIIEEIS
QIMKSNKTTDEKLETLLRMRYFSVYVDDKKDKRELVSQMLKKTINEIKTSNECDEMIKDA
TERIASQARKWKIKNGKSLRPYHHDQPISNFLKTNEFEVLKNEKDEYRWRSDTLEGTIPH
YNHRTHTLISSLVFALQSRIHEYSGCKASAIKYLLVKIQERYEEGYLELLPNRKWSLSYS
EIFNSKIRLYSAKVIHAASAMITLAHADPIDHVFLCQIISAFEIIPANAAKLLSSPMTLY
IGIAQLKSNEVVSTSSAAEVSPTLNPNVQKLSDDQINEWNQEMDEYPLHESIMVKHMKKN
IYNVNIESFYLIFNCFSATFHVGHRIDNQQDAIEDQVSVNYTSDVDREMYDQYYHMMKRM
FRDEIAFYVDEMAKKFNSDVTAESLSALANSSNGFSKTVTFIDRQIKTTKKLLHLDDDLI
NNSEGLQNIGAILQNGIPMGTRNVPARQTRGIFILPWQVAAVQHTLAETMYKRAKKGAQN
ASFAEAYTAKAATLTYGLLAQATSRADQLILYTDVSQWDASQHNTEPYRSAWINAIDEAR
EIYHVNKSEEPTVLGMNVLDKMKEIQAALLNSKLSIESPGSQRPPKVITYHGVASGEKTT
KIGNSYANVALINTILRKVELDLPSIRVTHIRVDGDDNVVTMYVDDNIAKVQSIIKEAYK
RMNARVKALASYTGLEMAKRFIISGKIFERGAISIFTAERPYGTDLSAQATTGSLLYSAS
VNAYRGFGDKYLSFLEDVLVPPSASIRVTGRLRMLLSPVTLFATGPVSFEVTPFGLGGRM
RLYSDNEKIMQLFKILTTSLSISVQPDEVKLYSQTKQFDVRVNKIQDSIRRAMNADAKII
IDVARDKEKQKTLGVPNVATTKNRSQIEKARKTLSFKEEKLSKVKDFYPEELFIEFIKNS
KVEEFKSVEFTPIYMHNSERIRLLQQQLGVRISDRHLFSKPKNTLLDLVSKHSPIKISPD
DLVKYSRKYNLTTLEGKKKFLIDLGLTGSELRYYLSSKLLMHDLLISKYDKLYETPGFGA
TQLTSIPLDLSAAETIFKCNVPMPHNYYEILMLILLYEYVHYVLFTGKRFTAVITVNSPK
NAAKLTSRLMKMIDNLQLDVVSFSDVVY
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgcggactatctcgaatggctttcgagaagtacggttcgcaatttagcatac
acatctcttgtttattcaaatccaaaggtcgctatagttaaaatcaatgatgaaaatgaa
aatttcgaatcagttgagcaaagacagaattctccatctcaaatcatcgaagagatttca
caaataatgaaaagcaacaaaaccactgatgaaaagctggaaacactgctgagaatgaga
tacttttcggtttatgtagatgataagaaagataagagagagctggtttctcaaatgctg
aaaaagacgatcaacgagattaaaacatccaatgaatgcgacgaaatgattaaagatgca
acagagaggatagcaagccaggccaggaagtggaaaatcaaaaatgggaagtccctcaga
ccatatcaccatgaccaaccaatttcaaactttctaaaaacgaatgaatttgaagttttg
aaaaatgaaaaagatgagtaccgatggagatcggatacacttgaaggaacgataccgcac
tataaccacagaacgcatacgcttatatcatcacttgtttttgcactccaaagccgaatc
cacgagtatagtgggtgtaaagcatcagcaattaagtatttgttagttaaaattcaggaa
agatacgaagaaggttatcttgaactgttaccaaataggaagtggtctctgagctattca
gaaatctttaattcgaaaataagactttattcagcaaaagtcattcatgcagcgtctgca
atgataacattagcacacgcagatccgatcgatcacgtttttttatgccaaatcatctca
gcgttcgaaataatacccgcaaatgcagcaaaattgctatcgtcgccaatgacgttatac
ataggcatagcgcaactcaaatcaaacgaagtcgtctccacatcatcagcggctgaagta
tcgccaacgctgaatccaaacgttcagaaactttccgatgatcaaatcaatgaatggaat
caggagatggatgaatatccactccatgaatctataatggtaaaacatatgaagaagaat
atttacaatgtaaatattgaatctttctacctcatttttaactgcttctcagcgacgttt
catgtgggtcatagaatagacaaccagcaagacgcgattgaggatcaagtaagtgtaaat
tatacatcagatgtcgatcgagagatgtatgaccaatactaccacatgatgaaaagaatg
ttcagagatgagatagcattttacgttgatgagatggcgaagaagtttaattctgatgta
accgctgaatccttgtcagcactagcaaattcatcaaacggattttcaaaaactgttaca
ttcatagacagacaaattaaaacaacgaagaaactgctgcatctcgatgatgacctaatt
aacaatagcgaagggctacaaaacattggcgcaatactgcagaacggaattccgatgggc
acaagaaatgtaccagcgaggcaaacaagaggaattttcatcttaccgtggcaagtagct
gcagtacaacacacgttagcagagacaatgtacaagagagctaagaaaggcgcacagaac
gcatcattcgctgaagcttacacagcgaaggcggcgactctgacatatggtcttctagca
caggctacttcaagagcggatcagttgatactttatactgacgtctcacaatgggacgcc
tcccaacataatactgaaccatataggtcagcgtggataaatgcgattgacgaggcaaga
gaaatttatcacgttaacaagtcggaagaacccactgtcctgggtatgaacgtgctcgac
aaaatgaaagagatccaggccgcgctgctcaattcaaaattgtcaatcgaatcgccggga
tcccaaaggccaccaaaggtaataacctatcacggtgttgcatcaggcgaaaaaaccacg
aaaattggaaattcatacgccaatgtcgctttaatcaacacgatattgcgcaaagtagaa
ctcgatctaccatctataagagttacacacataagggttgacggcgatgacaacgtagta
actatgtacgtcgatgacaacatagcgaaggtgcaatcaataatcaaagaagcatataag
cggatgaatgcaagagtaaaggccttagcatcatatacggggttagaaatggcaaaacga
tttatcatctcgggcaaaatattcgagagaggtgcaatttcaatatttactgctgaaaga
ccatacggcactgatttatcagcgcaggcaacgacgggatcacttttatattctgcttca
gttaacgcatatagaggcttcggcgataaatacctgtcttttctcgaagacgttctagtt
ccgccatctgcctcaatcagagtaacaggcagactccgaatgttactatcgccggttaca
ttgttcgcaacgggacctgtgtccttcgaagttacaccattcggacttggaggaagaatg
agattgtactcagacaatgagaaaatcatgcagctttttaagatattgactacatctctg
tcaatctcagttcaaccagatgaggtaaaattgtactcccaaactaagcagttcgatgtt
agagttaataaaattcaggattcaatcagaagagcgatgaatgctgatgcaaagataata
attgacgtcgctcgcgacaaagagaaacagaaaacactaggagtcccaaacgttgcaaca
acaaagaatagatcacaaatcgagaaagcaaggaagacactatcgtttaaagaggagaaa
ctgagtaaggttaaagacttctaccccgaagaactatttattgaatttatcaaaaattcg
aaagtcgaagagtttaaaagtgttgaattcacaccaatctatatgcataattcagagagg
attcgtctcttacagcaacagcttggcgtgcggatatccgatagacatttgttttcaaag
cctaaaaacactctgttggatctggtctccaaacattcgccaatcaaaatatcacccgat
gatctagtcaaatattctagaaaatataacttaacgacattagagggcaaaaagaaattc
ctgatcgatttaggattgactggttcagaactaaggtattatttatcatcaaagttattg
atgcatgatctattgatatccaaatatgataaactttatgagacaccaggattcggtgcg
acacaactcacgtcgataccgctcgacttatctgctgctgaaacaatctttaagtgcaat
gttcccatgcctcataattattatgaaatattgatgctaattttgctgtatgagtatgtt
cactatgttttattcacaggaaaacgttttacagcagtgataacagtgaattcaccaaag
aatgcagcgaaactgacttcgagattgatgaaaatgattgacaatctgcagttagatgtc
gtttctttttcggatgttgtatactaa
DBGET
integrated database retrieval system
