Viruses: 7012356
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Entry
7012356 CDS
T40000
Symbol
RdRp, PoLV_gp1
Name
(RefSeq) Potato latent virus; RdRp polyprotein replicase
KO
K26628
Betaflexiviridae RNA replication polyprotein
Virus
138982
Potato latent virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Vmethyltransf
RdRP_2
Peptidase_C23
Viral_helicase1
AAA_30
AAA_19
AAA_22
AAA_14
AAA_16
TsaE
AAA_23
Motif
Other DBs
NCBI-GeneID:
7012356
NCBI-ProteinID:
YP_002302557
RS:
NC_011525
UniProt:
B6RTB0
LinkDB
All DBs
Position
NC_011525:75..5417
Genome browser
AA seq
1780 aa
AA seq
DB search
MALTYRSPLEDIVGAFEPSVQTAIANTAANHYKQLEEEKGILFNYALPPEAKQRLIGAGI
YLSPFSAVPHSHPVCKILENHLLYVELPSRLDNSFMFVGIKNFKLDLLKRRHANLSMIQT
INRYVCSLDKIRYGSNFVVRSSASYPELCRRKGELDGAVLRELVPELMIKSAKNLFLHDE
LHYWTHRDLITFLEVLKPDKLLGTLVYPPELLKGAKKSLNSWCYTYRVDKDKLFFYPDGV
HSEGYEQPLSGGYLLETSRITTRDGEVYCVDVVCSKFAHHLIAITRGDLIVPTQRSFAPF
EAITSKGLNNLVRGKVECFPVCASVVSKLYRYLRTLKKPDEQSAMAKLSQLQANPTGEEI
HFIQGFAKLVINTNKIDSLINCDSIKVFMGKLFGPLPNWLTKRLRSVQEVSLDEFVHYFE
PYVVNVPTKHVNYGFEFNYVMEDFRYEQGENDLVDMLDNFDGSTKMSTSLCMMTPYVGLA
PLTTRRKFLCHIEENSIFRVVSRNIFCSYTNSYKVAVSTEGVVRILEIYSKVSVDLLGAY
LGKLLKKTEFIERVRSRVKAIAIKHLKYTWQQVGLAWFTSGRRGYTKYIDCSPYTMNTFK
ELKERWGVIVRELSKQQDNAEAAKNIPEQEIQTTSKPSCVEKRNYFSNTLMTSFAASGVK
GKEQVSSEIAKGRGERSELRATKLMGSCSTLGKVAHIASRKGSMGVLECVARVIKLDFQT
ALKFLRVKGVWMQEYESIGELEEEQIQSPAYDFCAAIAMTFNVEIELTFPGSELVYHFAA
SSTVSCIRLSIWEGVVTLMRAENDCVITACAQALAREPEDVVKVLKDRLEESILEEIWNG
EGVPFERMYLFFEALDIQAHCNRDGAQLVLNGGGKLARCFVIKEDHIEFAGEKKVSRVLE
LQDARTSSKADPELVKEFQKAGTVVEYVAVQSRAQVLAKSLVDATTGVCSSTIFNDCESL
ERSFRFTESELARNVCCVIGTFGAGKSTLFKDMMRQCLGKGVHYASPRKVLANELKASLG
LAKGKRNRKVGTENWNVHTFESFLKKAKNVAEGELVIIDEIQLYPPGYLDLLLYLIPEFT
SVFAVGDPCQSDYDNEKDRHVFLGVETDVCRLLSGREYEFNVLSRRFHNLGFESRLPCRF
KFPAGAVKEEYLFVNSMTEANELDSAYKSVYLVSSHLEKKIVEYQSDVKTPNVLTFGEST
GCTFKYGCILITQVSSACSERRWITALSRFSHNLCFINATGVPIENVAKSYKDRSLGKFL
CGTAVEGDIKSMAYGTPIFKEQFIAGVGRDEGVKEDKVTGDPWLKTMLDLMQLPDVEEAE
MMQEEMQEEWFKTHLPQEEIEGVRCRWIHKMLAKEARECRMGSIVSDQFPDDHSKQEGKQ
ITNAAERFEAIYPRHRANDTVTFIMAVKKRLRFSRPSVEKAKLTQAECYGTYLLKNFLDV
IKLKPAHDEAMMIRAKEDFEQKKVSKSAATIENHSGRSCRDWCIDIGQIFSKSQICTKWD
NRMRVAKAAQTIVCFQHAVLCRFAPYMRYIEMKLKEVLPARFYIHSGKGLDELNSWVKEG
RFEGVCTESDYEAFDASQDQYIVAFELALMRYLRLPNDLIEDYKYIKTHLGSKLGNFAIM
RFSGEASTFLFNTMANMLFTFMRYELHGDEYICFAGDDMCSSKRLRIKKTHESFLGKLKL
KAKVQHTEKPTFCGWNLCADGIYKKPQLVFERMCIAKELNNLHNCIDNYAIEVAFAYKLG
ELAVNRMDEEELGAFYNCVRLITKFRHLLKSNVVEVFKRK
NT seq
5343 nt
NT seq
+upstream
nt +downstream
nt
atggctttgacttacagaagtccattggaagatattgttggtgcatttgaaccaagtgtt
caaacagctattgcgaacacagctgctaaccactacaagcagcttgaggaagagaaggga
atcttatttaattatgcattgccacctgaggccaaacagaggttaataggcgctggcata
tatttaagtcccttttccgctgttccacattcgcatcctgtgtgtaaaattttagaaaat
catctgttgtatgtagagcttcctagtagactagataattcttttatgtttgtaggtatt
aaaaactttaagttggatctgctcaagcgcagacatgcaaatctaagcatgatccaaact
atcaatagatatgtttgtagtttagataaaataaggtacggttcaaatttcgtagttaga
tctagcgctagttatccagagctttgcagacgcaaaggtgagcttgacggagcagtgttg
agggaattggtgcctgagttgatgattaaaagcgctaagaatctattcttgcacgatgag
cttcattattggacccatcgggatctgattaccttcttggaggtactgaagccagacaaa
ctgttgggcaccttagtttacccacctgaattgctaaagggtgcgaagaaaagtttgaac
tcttggtgctacacatatagagtggacaaagacaaattgtttttttatccagatggcgtc
cattctgaaggctacgagcaaccattgagtggcggttacctcctcgaaacaagtaggatt
accacacgtgatggtgaagtttattgcgtcgatgttgtgtgcagtaaattcgcgcatcat
ttgattgcaataacccgtggtgatctgattgtacccacacaacgcagttttgctcccttt
gaggccataactagtaaaggtttgaataacttggtgaggggcaaggtggaatgtttcccc
gtatgcgcaagtgtagtgtctaaattgtataggtatttgcgcacactcaaaaaacccgat
gagcaatcagcaatggccaaattgagccaacttcaggcaaatcccactggggaagagata
catttcatccagggctttgccaaattggtgataaatacaaacaaaatcgacagtttaatc
aactgcgatagtattaaggtgttcatgggcaaattgtttggtccgttgcccaattggctt
accaagagattgaggagcgtgcaagaggtgtctctcgatgaatttgtccattactttgaa
ccatatgtcgtcaacgtgcccactaagcatgtgaactatggttttgagttcaattacgta
atggaagatttcaggtacgagcagggtgagaatgatctagtggatatgctagacaatttt
gatggctccacaaagatgagcacaagcctttgcatgatgaccccatacgtcggcttagca
ccattgaccacgcgacgcaaattcctatgccatatcgaggagaattccatattcagagtg
gtgtctaggaacatcttttgtagctacacaaatagttacaaagtggccgtgagcactgag
ggggtggttcggatacttgagatttatagcaaagtgtctgtggatctactgggagcgtat
ttgggaaaattgctcaagaaaacagagttcatagagagagtgcgatcaagggttaaggca
attgccataaagcacctcaagtacacttggcaacaggttggtctagcttggttcaccagt
ggaaggcgtggctacacaaaatacattgattgcagcccatacacgatgaataccttcaaa
gagcttaaagagagatggggtgtgattgtgcgtgaattgtctaaacagcaggacaacgct
gaagctgcgaaaaacatacctgagcaggaaattcaaacgaccagcaaaccaagttgtgtg
gagaagcgaaattacttctcgaacactttgatgactagctttgctgcgtcaggagtgaaa
ggcaaggaacaggtgagctccgaaattgccaagggtaggggtgaaaggagcgaattgagg
gcaactaaattgatgggctcatgcagcaccctcggcaaagtggctcacatagcatcaaga
aaaggctccatgggggtattggaatgtgtagcgagggtcatcaaattggatttccaaacc
gccttgaagttccttagagtcaagggtgtgtggatgcaggagtatgagagcataggcgag
ttggaggaggagcagatacagagtcctgcatatgatttttgtgctgcgatcgcaatgacc
ttcaatgttgaaattgaattgacgttcccaggctcagagcttgtttaccacttcgctgca
agttcaactgtgagttgtatccgcttgagcatttgggaaggcgtagtcacactgatgagg
gctgaaaatgattgcgttatcactgcatgtgcacaagctttagctagggagcctgaggat
gtagtgaaggtgctcaaagatagattggaggagagcatactggaagagatttggaacggc
gaaggggtgcctttcgagagaatgtatctcttctttgaagctctggatattcaagcacat
tgcaatcgcgatggtgcacagctagtgttgaatggcgggggcaagctggcgcgatgtttc
gtgattaaagaagatcacatcgagttcgcaggtgagaaaaaggtcagtagagtacttgag
ctccaggatgctagaacaagtagtaaagcagacccagaattggtcaaggagtttcagaaa
gccgggactgtggtagaatatgtagcagtgcaatccagagcgcaagtcctggcgaagagt
ctagtggatgcaaccactggggtgtgcagctcaaccatattcaatgactgtgagagcttg
gaacgttcctttagattcaccgaaagcgaactagcgcgaaatgtttgttgtgttatcggt
acgtttggggctgggaagagtaccctgttcaaggatatgatgaggcagtgcctagggaaa
ggtgttcactacgcatcacctaggaaggtgttggcgaatgagctcaaagctagtttgggt
ttggcaaaagggaagcggaatcgaaaagtagggacagagaattggaatgtgcacaccttc
gaaagtttcctaaagaaggcgaaaaatgttgcagagggtgagttggtgatcattgatgag
atccagttgtacccgcctggctacctggatcttctactttacctcatacctgagttcact
agcgtcttcgcggtcggtgatccatgccaaagtgattatgacaacgagaaggataggcat
gtcttcttaggggttgagacagatgtctgtaggcttctgagcggccgtgagtacgaattt
aatgtactttcccgcagattccacaacttaggctttgaaagcagattgccctgcagattc
aaattcccggctggagcagtcaaggaagagtatttgttcgttaattcaatgactgaggct
aatgagttggacagcgcctacaaaagtgtgtaccttgtgtcatcccacttggagaagaaa
atagtggagtaccagagtgacgttaaaacgccgaatgtgctgacgtttggtgagtcgact
ggttgcaccttcaagtatggttgcattctcatcacgcaagtgagtagcgcatgtagtgag
cgcaggtggatcactgctctatcgagattttctcacaatctctgtttcatcaatgcaact
ggtgtgcccatagaaaatgtggcgaagagttacaaagacagaagtttgggaaaattcctg
tgtggaactgctgttgagggtgatataaaatcaatggcttatgggaccccaatcttcaaa
gagcagttcatcgccggcgttgggcgcgatgaaggtgtcaaggaggataaagtcaccggt
gatccttggttgaaaaccatgttggatttgatgcagctcccagatgttgaggaagcagag
atgatgcaggaagagatgcaagaagagtggttcaaaacccatttgccacaagaggaaata
gaaggggtcagatgccgctggattcacaaaatgctagctaaagaagcgagggaatgtaga
atgggatcgatcgtttcagaccaattcccagatgatcatagcaagcaagaggggaagcaa
atcactaatgcagctgagcgttttgaagctatatacccaagacatcgggcaaacgacaca
gtcacattcattatggctgtgaagaaaaggctgagattttccaggccttctgttgagaaa
gcgaagctcacgcaggctgaatgttatggaacttacctgctcaaaaacttcttggatgtg
atcaagctcaagcccgcacatgatgaggcaatgatgatcagagcgaaggaagattttgag
cagaagaaggtgagtaagagtgctgcaaccatagagaatcacagtgggaggtcatgcaga
gattggtgcatagatatagggcagatcttttcgaaaagtcagatatgcaccaaatgggac
aacagaatgcgggtagctaaagcagcacaaacgattgtttgctttcaacatgccgtcttg
tgccgctttgctccctacatgaggtacattgaaatgaagctgaaagaagtgctgccggct
cggttttacattcatagtggcaaaggtttagatgagctcaactcttgggttaaagaaggt
aggtttgagggagtgtgcactgagtccgattatgaggcttttgacgcttcgcaggaccag
tacatcgtcgcttttgagttggcactgatgaggtaccttaggcttccaaatgacctgatt
gaggattacaagtacataaagactcacttgggttccaagctggggaattttgcaatcatg
cgcttctctggtgaggccagcacttttctattcaacacaatggcaaacatgctcttcacc
ttcatgcggtatgagcttcatggcgatgagtacatttgctttgctggtgatgacatgtgt
tcatcaaagagattgcgaatcaagaaaacacatgaaagctttcttggaaagctgaagttg
aaggctaaggtgcaacacactgagaagcccacattttgtggctggaatttatgtgctgat
ggaatatacaagaagccacagctggtctttgagagaatgtgcattgccaaagagctcaac
aacctgcacaactgcatcgataattacgcaatcgaagtggctttcgcttacaaacttggg
gagctggctgttaacaggatggatgaagaggaattgggggccttttacaattgcgttagg
ctcataacaaaattcaggcatctgctcaaatccaatgtagtggaggtctttaagcgtaaa
tag
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integrated database retrieval system
