Viruses: 7070141
Help
Entry
7070141 CDS
T40000
Symbol
ORF42, EHV9_gORF42
Name
(RefSeq) Equid alphaherpesvirus 9; major capsid protein
KO
K26014
Herpesviridae major capsid protein
Virus
55744
Equid alphaherpesvirus 9
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Herpes_MCP
Motif
Other DBs
NCBI-GeneID:
7070141
NCBI-ProteinID:
YP_002333524
RS:
NC_011644
UniProt:
B7FEI5
LinkDB
All DBs
Position
NC_011644:77244..81374
Genome browser
AA seq
1376 aa
AA seq
DB search
MDRRSEAFKIPVPEVIPAGQILSTIEVSSHRTLFDFFKQIRSDDNGLYAAQFDVLLGTYC
NTLTLVRFLELGLSVSCVCTKFPELNYVNDGTIQFEVQQPMIARDGPHPVDQPTHTYMMK
HIEQRSLSAAFAIAAEALGLIGGTTLDGTQISSSLRVRAIQQLARNVQTVLDSFERGTAD
QLLRVLLEKAPPLTLLAPLQIYRDEGRLASRVNRAVLVSELKRRVVEDTFFLTKYERNRK
ELVVARLAELVNCTAPSVAVTRMTHSDTKGRPVDGVVVTTAGVRQRLLQGILTLEDMAAD
VPVTYGEMMITGTNLVTALVMGKAVRNLDDVAHHLLGMQRDQVRANEKLIKDYEDVPSTA
RVRADLVLVGDRLVFLEALEKRVYQATNVPYPLVGNLDLTFIIPLGIFKPATDRYSRHSG
GFAPTPGQPDPRTYPPQTVYFFNKDGNLVQLSFDSAAGTVCHSSFLDVDSVLVAIRREPY
ELHCAFGAYVTLPPAGTLLDQMRRFFERWHMLMPARPRWTVEALMTIDQLLSPGNANLRL
ELHPAFDFFVAPADVAIPGPFDMPNVMPTVMAMPRIINGNIPLPLCPVEFRDSRGFELSV
DRHRLSPATVLAVRGAFRDANYPMVFYIIEAVIHGSERTFCALARLIIQCIVSYWRNTHQ
VAFVNNFYMIMYINAYLGNGELPEECTAIYRDLLEHVQALRRLVAEYTVPGEAVGGQGHD
ALNNVLLDPALLPPLIWDCDPILHRADMGRARAQDLWVDGVDYAAIPWVEMAEVNFGNTG
GHLVHNRPIRGENKRNPIVPHHDPEWSVLSKIYYYAVVPAFSRGNCCTMGVRYDRVYPLV
QTVVIPDLGAEEIAPTSPSDPRHPLNPRHLVPNTLNILFHNARVAVDTDALLLLQEVVTN
MAERTTPVLATAAPDAGTATAVTQEMRTFDGTLHHGILMMAYQRNDETLLEGTFFYPAPV
NALFACPEHLGALPGLNAEVLEAARDVPPVPHFFGGNYYATVRQPVAQHAVQSRADENTL
TYALMAGYFKLGPIALSHQFATGFHPGFAFTVVRQDRFLTENILFAEKASESYFMGQLQV
NRHEAVGGVNFVLTQPRANVDLGVGFTAAYAAAALRTPVTDMGNLPQNLYLTRGTIPMLD
GDADAYLRRVVNTGNRLGPQGPRPIFGQLMPATPAGVAHGQAAVCEFIVTPVSADLNYFR
RPCNPRGRSAGPVYACDGEADAVDVMYDHTQGDPAYPSRATVNPWASQRNSYGDRLYNGK
YNLNGASPVYSPCFKFFTPTEVEAKGRNMTQLIADVGASVAPSTSNTEIQFKRPHGSTDL
VEDPCSLFQEAYPLLSSTDTALLRTPNIGEIGADEGHFAQYLIRDESPLKGCFPRI
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atggaccggcgctcagaggcgttcaaaattccggtaccagaagtaatccctgccggacag
attctatcaactatagaagtgtcgtcccaccgcactctatttgactttttcaagcagatt
cgctcggacgataatggcctctatgcagcgcagtttgacgtgctactcggaacgtattgt
aacacgctaacgctggtgcgctttctggaactaggattatccgtatcgtgcgtgtgcacc
aagtttccggagcttaactacgttaatgatggcacaatccagtttgaagtgcagcagccg
atgatagctcgggacggcccacatcctgtggaccagcctacccacacctacatgatgaag
cacatcgagcagcgatctctgagcgcggcttttgctatcgcggccgaggccctgggcctg
attgggggcacaaccctagacggtacgcagatctcatcgtccctgcgggtgagggctata
cagcagctggccaggaacgtgcagacggtgctagactcgtttgagcgcggaaccgccgat
caacttttgcgtgttttgctggagaaggcccccccgctgaccctcttggctcccctgcag
atttaccgcgacgagggccgcctggcgtctcgagtcaatcgcgccgtgctggtctcggag
ctcaaacggcgagtggtagaagacaccttctttctcaccaagtacgagcgtaacagaaag
gagctggtggtagcccgcctggctgagctggttaactgtacagccccctccgtcgccgtt
actagaatgacccattcggacacaaagggaagacccgtggacggtgtagtcgttacgact
gctggcgtgcgtcagcgcctattacaggggattctaactttggaggatatggccgccgat
gttccggttacgtacggtgagatgatgattaccggcacaaacctagttacggctctcgta
atgggcaaggccgtgagaaacctggacgacgtcgcccaccacttgttggggatgcagcgt
gatcaggtcagggcgaacgaaaaacttatcaaagactacgaggatgtacccagtacggcg
cgagtgcgcgccgacctagttctcgtgggggaccgcctagtctttcttgaggccctggaa
aagcgcgtgtaccaggcgaccaacgttccgtacccgcttgttggaaatttagatttgacg
tttatcattcccctgggcatcttcaagccggccaccgaccggtattcgcgccactcggga
ggctttgctccaacccccgggcagccagaccctcgcacctacccaccccaaaccgtttac
tttttcaacaaggacgggaatctcgtacagctatcctttgacagcgctgcgggaaccgtg
tgccatagctcgtttttggatgtggattctgtgttggtggccatccgacgagaaccctac
gagctccactgcgcgtttggagcctacgtgaccctacccccagccggcaccttgcttgac
cagatgagaaggttttttgagcgatggcatatgctcatgcctgcgcgcccacgctggacc
gtggaggcgctaatgaccatcgaccagcttctctctccaggcaacgctaacctgcgactg
gagcttcaccccgcctttgatttttttgtggccccggcggatgtcgccattcccggtccg
ttcgacatgccgaacgtcatgcccacggtgatggccatgccgcgcatcatcaacgggaac
atccccctccccctatgtcctgtggaattccgcgacagtcggggcttcgaactgagcgtg
gataggcacaggctcagcccggcgacggttctggccgtgcgcggcgcgttcagagacgcc
aactaccccatggtgttttacatcatcgaggcggtgattcacggaagcgaacgcacgttc
tgcgcgctggccagacttataattcagtgtatcgtcagttactggcgaaacacccaccag
gtggcgtttgttaacaacttttacatgatcatgtacataaacgcctacctagggaacggc
gagctgccagaggagtgcacggctatctaccgcgaccttttggagcacgtccaggctctc
aggcgactcgtagccgagtacactgttcccggggaagccgtgggaggccagggacacgac
gcgctgaacaatgtgctgctcgatccggccctgctaccgccactcatttgggactgtgac
ccgattttgcacagggccgacatgggtagggccagggcacaggatctatgggtggacggg
gtggactacgcagcaattccctgggtagaaatggccgaggttaactttggaaacaccggc
ggccaccttgtgcacaacaggcccatccgcggagagaacaagagaaacccgattgtgcct
caccacgacccagagtggtcggtgttatccaagatatactactacgctgtggtgcctgca
ttctcgcgcggtaactgctgtaccatgggagtgaggtacgaccgcgtgtacccgctcgtt
cagacagttgttatcccagacttgggggcggaagagattgccccaaccagcccaagcgac
cctcgccatccgctgaacccgcgccacctagtgccaaacacgctaaacatcttgtttcac
aacgccagagttgccgtcgacaccgacgccctgctactcctccaggaggtagtcaccaac
atggcggagcgcactactcctgtgctggcaaccgccgcgcctgacgctggaaccgccaca
gccgtgactcaggaaatgcgcacctttgatggaacactacaccacggcattctgatgatg
gcctaccagcgtaacgacgaaactcttttggaggggacctttttttacccagcccctgtc
aacgctctctttgcctgccccgagcacttgggggctcttcccgggcttaacgcagaagtc
ttggaggccgccagggacgtgcccccggttccacactttttcggtggaaattactacgct
acagtcagacaacccgttgcgcagcacgccgtacagagcagagcggatgagaacacgcta
acgtacgcgctgatggcggggtacttcaaactcgggccaatagccctatctcatcagttt
gccacggggttccacccagggttcgcctttacggttgtgcgccaggacaggtttctcacg
gagaacattctctttgccgagaaggcgtctgaatcgtacttcatgggccagctgcaggtt
aaccgccacgaggcggttgggggggttaactttgttctcactcagccacgggctaacgtg
gacttgggggttggctttactgccgcgtacgcagccgccgcgctacgcacgcccgttaca
gacatgggaaatctgccccagaacctgtatctgacacgcggtacgatacccatgctggac
ggggacgcggatgcgtacctgcggcgcgtggtcaacaccggaaatcgcctggggccccag
ggacccaggccaatctttgggcagctgatgccggccacgccggcgggcgtcgcccacggc
caggccgccgtgtgtgaatttatcgtcacgccggtgtctgcagacttaaattattttagg
cgtccgtgtaaccccagaggtaggagcgcaggaccagtgtacgcgtgcgatggagaggcc
gacgcagtggacgttatgtacgaccacactcagggagatccggcctacccaagccgcgcc
accgttaacccgtgggcttcccagcgcaactcttacggcgacagattgtataacggcaag
tataacctgaacggggcgtccccggtgtacagtccatgctttaagtttttcacacccacc
gaagtggaagccaagggacgtaatatgacacagctcatagccgatgtcggggccagcgtc
gccccaagtacgtctaacaccgaaatccagtttaaacgcccccacggctcgacggacctg
gttgaggacccgtgttcgctgtttcaagaagcgtatccgctgctcagctctacggacacg
gccctactacgcacgcctaacatcggcgaaatcggcgccgacgagggacatttcgctcag
tacctaattcgcgacgaatccccgctaaaaggctgttttccgcgaatttag
DBGET
integrated database retrieval system
