Viruses: 7360979
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Entry
7360979 CDS
T40000
Symbol
PVMV_gp1
Name
(RefSeq) Pepper veinal mottle virus; polyprotein
Virus
255066
Pepper veinal mottle virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Peptidase_C6
Poty_coat
RdRP_1
Poty_PP
Peptidase_C4
Potyvirid-P3
Peptidase_S30
DEAD
Helicase_C
Flavi_DEAD
Peptidase_S76
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
7360979
NCBI-ProteinID:
YP_002519375
RS:
NC_011918
UniProt:
B8K2N0
LinkDB
All DBs
Position
NC_011918:195..9416
Genome browser
AA seq
3073 aa
AA seq
DB search
MAIRVSFPCFYNTHNSTLSECKSVTMSICFGSLKPKQIDWNEASNNLLKEYDDKMDAFEK
DCEKFAREMSGQRAVLKGGVYKYAPKTRAQLRKERKHNRILEERAEFLNGKDSIITGMVF
PVEARKAQTEEAPFKYPPIVQRKPRKTPHMNYVTLNDTQFDQFTRELINACEATSQPMEI
IGKRKVRVQARVTRLFSNTRCLQVVTKHHKGKLCEIDVPNMRGIENSLGHLAQAAWKGGF
VNEERLGYGTSGCCIPHGLLKGRTFDGGFDFFIVRGRYGPLLMDSTRYTPKQVLADIQHY
SAGDKFWSGFDQAFRAHRTTPVIHSGMNTLDVTQCGEVAAILCQALMPCCRITCTVCATT
NADITQLELRERIAHSIKGSISELSEKYPAFPHAVRFLKDYLISLNNLNPNREASGKVHF
LIGDRKEQPFSHILAVNETLIKGGRATSDEFAHASDELLQLARFHKNRVESLKKGSLHLF
RNKAASKAHINPSLMCDNQLDANGNFVWGKRGYHAKRFFANYFDRIEPTSGYDKYVIRKF
PNGSRKLAIGNLILSTNLDELRKQLQGESIQTYPLTQQCVSKRNETFIYPCCCVTYDDGS
PMLSEYKAPTKNHLVLGNSGDFKYLDLPTEISENLYIAKEGYCYINIFLSMLVEVDENEA
KDYTKWVRDIVVQQLGQWPTMTDVALACYQLSVLFPSTRSAELPRILVDHKTKTMHVIDS
FGSLTTGYHILKANTVSQLLMFASDTLESEMRMYRVGGSDPRTLTDYRKRLFQSVYKPAV
FKQLMLEEPVILTLAIASPTLLSEFYHNVSLHRAMGLVGQAEMPVRIAVTHIVELAKKVT
RAESLYEQSAIIESNAQELYAILDSVPYKTEALEHILAYLLTVVLDADSDATLEDIGFRT
LKYKSLSVLEKICRDDLDAQWRDLSLSAKSRITWQSLRSRKSCTGGLRDTACSIFKKVFE
SSTAYVQGKAQKIPAPFMYMLSKASKSASYIRSSVLNRMYSYIAYSFHDAFQFIHTLAIL
SVLLTIYTNILNIRNLNKKRALLLVKEADRLKSERIERCFEEISKKLNGAPTEQQFVQFI
QEKDPQALQYYSEQNDGVKHQASKRPAEAKLEQIVAFVALMMMVFDTDRSDCVYKVLNKL
KNVMGVVDNDAVNHQSIDTILDDFESKNEMIEFELTAPDAKSLAYKSSTFQKWWDNQIST
NNVISHYRTEGHFIQFTRETSAQVASDISSSEIRDFLIRGPVGSGKSTGLPSLLCKKGRV
LLLEPTRPLAENVHAQLSSAPFHLNPTLMMRNKSVFGSTPISVMTSGYALHYLANNAHRL
KEFSFIIFDECHVLDASAMAFRSLLADRAFEGKILKVSATPPGRETEFTTQFPVKLRTED
HLSFQQFVDAQGTGSNADVISDADNILVYVASYNEVDQLSKMLVERHHKVTKVDGRTMKS
GAVEIKTVGTKQRKHFIVATNIIENGVTLDIEAVVDFGQKVGADVRSDERMICYTKGAIN
YGERVQRLGRVGRTKPGCALRIGHTNKGIEAIPTVIANEAAFLCFIYGLPVMTAQVSTSL
LSSCTVQQARTLALFELPFYFLQDFVAADGSMHPAVHALVKKFKLRESEVILNKLAIPHA
AVNKWMSVREYNQCSKQMDLDPDIKLSFLVKEVPESLYEKLWHCVQSHRGDAGFKKIATH
NAAKIAHKLRADNASIQRTVCSSINDAAEMQKKEHFDSLVNANTTSLSFSLQSISNMIRS
RYAKDYSVQNLSILHEARAQLVEFNNLYSEDIISGAASIWTMRDSIVECGAMETVMYQST
EEIGKFLGLKGFWNKKLLTRDVLIGAGVACGGAWMLYQFVMDSFGDDVSHQAQGRNKRQK
QKLKFRDARDAKLGRVVIDDDSGAIEHFFGSAYTKKGKSKGKTHGMGKKNRRFVNMYGFD
PTEYSFVRFVDPITGEMLDESVMADIMLVQEHFDDLRHEYISEDKIGVQALYKNPGIQAY
FVKDKVSPVLKVDLTQHEPLKVCDNSATIAGYPEHKGMLRQTGQATLVTHAELPSSEKVE
HEAKSLNKGLRDHNQISKVVCKLENESDSYVTSIHGVGFGSVIITNRHLMKRNNGQLRVK
TAHGDFKIANTKEMRIHPVDKHDLILVRLPKDFPPFPTKIKFREPKLTDSICLIGSNFQE
RFLSSLVSASSETSPVENSKFWRHWIDTKDGHCGLPLVSTNDGAIVGFHSLTSMNTDQNY
FASVPSDLAQMIKDFETLEWRKCWVYNPNEIGWGSLKLQQDKPGGMFKVDKLIEDLQSTF
VQEQGEEKWLYAQLYGNLKAVGKSESQLETKHVGKGQCPLFQLYLSTHKEAKEYFKPLMG
AYAKSRLNRIAYAKDILSMQRKLKWAKLDVACLELAVEDVICDLHAVNFTTCEYITDEEQ
IFQSLNMKSAVGAMYRGKKRDYFETYTTEDKERILYESCLRLYTGKLGIWNGSIKAELRP
MEKVQANKTRTFTAAPIDTLLAGKVCVDDFNNQFYSKHTIAPWSVGISKFSGGWDKLLRK
LPDGWIYCSADGSRFDSSLTPYLINAVAQIRLAFMEKWDIGEQMIKNLYAEIIYTPILTA
DGTIVKKFKGNNSGQPSTVVDNTLMVLIAMRYSLRRLGMNYKDQIKRCVFFANGDDLIVA
VRHEDEWVLDSLQAPFQELGLSYNFDDRTTNRSELWFMSHQGKLIEDMYIPKLEEERIVS
ILEWDRAEQPEHRLEAICAAMIEAWGHSELLHNIRLFYKWIIEQAPYSMLVANGKAPYIS
EVALRRLYTNGENDDDVSEYLKALSRSQKEIERLEGDDFVLHQAGETIDAGKSSGKEVTA
SKQPTTSQPTEAKTVLDRDVNAGTQGTFTIPRLKGMSSKLTLPKVSSQSVVNLEHLLNYK
PDQVHLSNTRALQSQFASWYNGVKNDYDVDDEQMKIILNGLMVWCIENGTSPNINGMWVM
VDGEEQIEYPIKPLIDHAKPSFRQIMAHFSNLAEAYIEKRNSEKSYMPRYGLQRNLTDMS
LARYAFDFYEMTSKTPVRAREAHIQMKAAALRNANNRMFGLDGKVGTQEEDTERHTAEDV
NRNMHNLLGVRGV
NT seq
9222 nt
NT seq
+upstream
nt +downstream
nt
atggcaatccgcgtctctttcccgtgcttctacaacactcacaactctacactatctgag
tgcaaatcggtaactatgagcatatgctttggtagtctgaagccaaagcagattgattgg
aatgaagcatccaacaatttactgaaggagtatgatgataagatggatgcctttgaaaag
gattgtgaaaagtttgctcgtgaaatgagtggacaaagggctgttcttaaagggggtgtt
tacaaatatgctccaaaaacaagagcgcaacttcgcaaagagaggaagcacaatcgcatt
cttgaggaaagagctgaattcctcaatgggaaggactcaatcattacaggaatggtcttc
cctgttgaagctaggaaggcacaaacagaagaagctccattcaaatatcctcccattgtt
cagagaaaaccgaggaaaacaccacacatgaactatgtcacactgaatgacactcagttc
gaccaatttaccagggagctaattaacgcttgcgaagcaacctcgcaaccaatggagata
attggtaaaaggaaggttagagtacaagcacgggtcacacgcctattctcaaatactagg
tgccttcaggtggtgacaaaacaccacaaaggtaagctatgtgaaatcgatgtccctaat
atgcgtgggatagagaattcacttggccatttagcacaagctgcgtggaagggcggtttc
gtgaatgaagagagacttggatatgggactagtggttgctgcatacctcatggcttgctc
aaaggtagaactttcgatggtggcttcgatttcttcattgtgcgtggtagatatgggcca
cttttaatggattcgactaggtatacaccaaagcaggtgcttgcagatatccaacactac
tcagctggagataagttttggagtggatttgatcaggcattccgagcacaccgcacaaca
ccagtgatacacagcggaatgaacacacttgatgttacacagtgtggtgaagttgcggca
atcctttgtcaagctctaatgccctgttgtcgcataacatgcactgtctgtgccaccact
aacgcggatatcactcagcttgaattgcgtgagcgcattgcacattcaatcaaaggaagc
atttcagagttaagtgagaaatatccagcttttccacacgctgttagatttctaaaggat
tatttgatctctctaaacaatcttaatccaaatagagaggctagtggtaaagttcacttt
ttgattggagacaggaaggaacaacccttttcccacatactagcagtgaatgaaacattg
attaagggaggaagagcaacaagtgacgaatttgcacatgcatccgatgaattactccaa
ttggcaaggtttcacaagaatcgggttgagtcactcaagaagggatcgctccatttattt
agaaacaaagcagcttcaaaagcgcacattaatccatctttgatgtgtgataatcagctc
gatgcgaatgggaactttgtgtggggaaaacgtggttaccacgcaaaaagattctttgcg
aattatttcgatcgaatcgaacccacaagtggatatgataagtacgtaattcgcaaattt
ccaaatggttcaagaaagctggctattggtaatttaattctctccacgaacttggatgaa
cttagaaagcagctccaaggagagagtattcaaacatatcctttgactcagcagtgtgta
agcaagaggaatgagacatttatttatccatgctgctgtgtcacatatgatgatggaagc
ccaatgctctctgaatataaagctccaacaaagaatcatttagttcttggtaattcagga
gattttaaatatcttgatctaccgacagagataagtgaaaatttgtacatagcaaaggaa
ggctactgttacatcaatattttcttatcaatgttggttgaagtcgatgaaaatgaagcc
aaggactatactaagtgggtcagagacatagtggtgcagcaactcggacagtggccgaca
atgactgatgtggctttagcttgctaccagctctcagtgttgtttccatcgacacgctct
gctgagctacccagaattttagttgaccacaaaactaaaacgatgcatgttatcgattca
tttggatcactaacaactgggtaccacatcctcaaagctaacactgttagtcaattattg
atgttcgcaagcgacacattagagtcagagatgagaatgtaccgtgttggaggtagtgac
ccacgaactcttaccgactatagaaagcggctttttcaatcagtgtacaaaccagcagtt
ttcaaacaattaatgcttgaagaacctgtcatcctcacactagcaatagcttcaccaaca
ctgctaagtgagttttaccacaatgtaagcttacacagagccatgggcctcgttgggcaa
gcagagatgccagtgagaattgcagtaactcatattgttgaattggctaagaaggtaact
cgagctgaatcattatacgaacaatctgcaattattgagtcaaatgctcaggaactgtat
gcgatactggattcagtaccctacaaaacagaagctcttgaacatatcctggcgtacttg
ctgaccgttgtacttgatgccgacagtgacgcaacgttggaggatattggtttcagaacg
ttaaaatataagtcccttagtgtgcttgaaaaaatctgcagggacgatttggatgcacaa
tggagagatttaagcttgtctgcaaaatctcgtataacttggcaatcattaagatcaaga
aagtcatgtacaggcggcttgcgcgacaccgcttgcagcattttcaagaaagttttcgag
tcttccacagcatatgtacagggcaaggctcagaagataccagcgccttttatgtacatg
ttatctaaggcaagtaaatctgctagttacattcgttcttcagtgcttaataggatgtac
agctacatagcttatagctttcatgatgcatttcaatttatacacacccttgctatcctt
agtgttttgctaactatatatactaacatactaaacattaggaatctgaataaaaagaga
gctttgctactcgtgaaggaggcagataggttgaagagtgagcgtattgagcgttgcttc
gaagaaattagcaagaaattgaatggcgcaccaacagaacagcaattcgtccagttcatt
caagagaaagatccgcaagctcttcaatattattcggaacagaacgatggtgtgaagcat
caagcgagcaagagaccagccgaagctaagcttgaacagatcgtagcttttgtcgcactt
atgatgatggtttttgatactgatagaagcgactgtgtctacaaagtgctcaataagctc
aagaatgtcatgggagttgttgataatgacgcagtcaatcatcagagcattgacacgatt
ttggatgattttgagagcaagaatgaaatgatcgagttcgagctcacggcacctgatgca
aaatcccttgcatataaatcatcaacattccagaagtggtgggacaatcagatcagcacg
aataatgttatatcacactatagaactgaggggcatttcattcagttcacacgggagact
tcggcccaagttgccagtgatattagcagtagtgaaatccgtgattttctgatcagaggt
ccagtgggttctggaaaatcaactggtctgcctagtctactatgcaagaagggaagggtt
ctattgcttgagccaacaaggccattagctgaaaatgtgcatgctcaactcagttcagca
ccatttcacttaaatccaactttgatgatgaggaataaatccgtgtttggttccactccg
atctctgtaatgacaagtggctatgccctgcattatcttgcaaacaacgcacataggctt
aaagagtttagtttcattatatttgatgaatgccatgtgttagatgctagtgctatggca
ttcagaagtctacttgctgatcgtgcgtttgaaggaaagatactgaaagtgtcagcaaca
ccaccggggagagaaactgaattcacaactcaatttccagtgaaactcagaacagaggat
cacctgagtttccagcaatttgtggacgcacaaggaacaggatcaaatgctgatgtaata
agtgatgcagacaacatattagtgtatgttgcgagttacaacgaagtggatcaattgtcg
aaaatgctagttgagagacatcacaaggtcacaaaagtggatgggagaacaatgaagtct
ggcgctgtggagataaagactgtcggaacaaagcaacgaaagcacttcattgttgcaaca
aatatcattgagaatggtgtgactctggacattgaggctgttgtggatttcggtcaaaaa
gttggagctgatgtacgatctgatgaacgcatgatctgctatacaaaaggagctattaac
tatggagaaagagtgcagcgtcttggaagagttgggcgaacaaagcctggttgtgccctg
cggattgggcacacgaacaaaggaattgaggcaataccaaccgttattgctaatgaagcg
gcgtttctttgcttcatctatgggttaccagtcatgacagcacaggttagcaccagcttg
cttagctcttgtacagttcaacaagcgcggactctagcattgtttgagctgccattttac
ttcttgcaggactttgtcgcggctgacggctctatgcacccagcagtgcatgcacttgtg
aagaagtttaaactgcgcgagagtgaagtgatattgaacaaattggcaattcctcacgca
gctgtcaacaaatggatgtcagtccgtgaatacaatcaatgctcgaagcagatggatcta
gatcctgatatcaagttgtcgttcctcgtaaaggaagtgcctgagagtttgtacgaaaag
ttgtggcactgtgttcaatcacatagaggagatgctggttttaagaagatagctacacat
aatgcagcaaaaattgctcataaactgagagctgataatgcatctatccaaagaacagta
tgctcatcgatcaatgatgctgcagagatgcaaaagaaggagcacttcgactcgcttgtc
aatgctaatactacatcactaagcttttcactgcagtcaattagcaacatgatcagatcg
aggtacgctaaggactattcagttcagaatctcagcatactgcacgaagcaagagcccaa
ctagttgaattcaacaatctctattcagaggacataatcagtggggcggcatcaatatgg
acaatgcgtgacagtattgtcgagtgcggcgctatggaaactgtcatgtatcagagtaca
gaagagattgggaagttccttggtttgaagggcttctggaacaagaagttgctcactcgc
gatgtgttgattggtgctggtgtggcttgtggaggtgcttggatgctatatcagtttgtt
atggattcatttggagatgacgtgtcacaccaggcgcagggcagaaacaagagacagaaa
caaaaactaaagtttagagatgcgcgagatgcgaagcttgggagagttgtcattgacgat
gattcaggtgcaattgaacacttctttgggagcgcatacacaaagaagggtaaatcaaaa
ggaaagacccatggtatgggaaagaagaatcgcagatttgtcaacatgtatggctttgac
cctactgaatattcctttgtccgatttgttgatccaatcactggtgaaatgcttgatgaa
agtgtcatggcagatatcatgttggtgcaggagcacttcgatgatttacgccatgagtac
atatcagaagacaaaattggggtacaggcactctataaaaatcctggaatccaagcatat
tttgttaaggataaagtttcgcccgttctcaaagtggacttgacacagcatgagcctctt
aaagtgtgtgataattcagcaaccatagctggttatccagaacacaaaggaatgttgaga
cagacaggtcaagcaactctagttacacatgcagaactcccaagttcagagaaggttgag
catgaggcaaagtctctgaacaaaggtttgcgtgatcacaatcagatctccaaagtggtg
tgcaaactcgaaaatgaatcagattcttatgttacatcgatacatggggttggatttgga
tcggtgattatcacaaatcggcatttgatgaaacgcaacaatggtcagcttcgggtgaaa
actgcgcatggtgactttaagattgcaaacactaaggagatgcgtatacacccagtggac
aaacatgacctgattttggtgagactgccaaaggacttcccacctttccccacaaagatt
aagtttagagaacctaagctcactgattcaatttgtttgataggctcgaactttcaagaa
cgattccttagcagcctagtgtcagcatcaagtgaaacttcaccagttgagaattctaag
ttttggcgacactggatcgacactaaggatggtcattgtggtttgcctcttgtttcaact
aatgatggtgcaatagttgggttccacagtttaacaagtatgaacacagaccaaaactac
ttcgcatccgttccgagtgatctggcacaaatgatcaaggattttgaaacattggaatgg
aggaagtgctgggtctataatccaaatgaaattggctggggctctctgaaactacaacaa
gataagcctggtgggatgtttaaagttgataaactcattgaggatcttcaatccacattt
gtgcaggagcaaggagaagaaaaatggttgtatgcacagctttatggtaatttgaaagct
gttggaaaaagcgagagccaattagagactaagcatgtggggaaaggacagtgcccattg
ttccagctgtatctctcgacacataaagaagcaaaagagtatttcaagccacttatggga
gcatacgcaaaaagcaggcttaatcgaattgcatatgcaaaggacattttaagtatgcaa
cggaaattgaagtgggcaaagttggatgtggcatgtttggaattggcagtcgaggacgtc
atatgtgatttacatgctgtgaacttcacaacatgtgaatacataacagatgaggaacag
atatttcaatctctcaacatgaaatcggctgttggagcaatgtacagaggtaagaagcgg
gactacttcgagacatacacaactgaggacaaagaaagaattctttatgaaagttgtctc
agactgtacacaggtaaacttgggatttggaacggttcaatcaaggccgaacttcgccca
atggagaaagttcaagcaaacaagacgagaacattcacagctgctccaattgatacgctt
ttggctggaaaggtgtgtgttgatgacttcaacaatcaattttactcaaagcacacaata
gcaccctggagtgtgggtatttccaagttctctggtggctgggataagcttctcagaaaa
ttacctgatggttggatctattgcagtgccgatgggagccgttttgatagctcgttgact
ccttatttgattaacgctgttgcacagatcaggttagcattcatggagaagtgggacata
ggtgaacaaatgatcaagaacctctatgccgaaatcatttacacacctatacttacagct
gatggcacaattgtgaagaagttcaaaggtaataactctgggcagccgtcaactgttgtt
gataacactctcatggtcttaattgctatgagatattcattaaggcggcttggcatgaac
tacaaggatcaaatcaaaaggtgtgtcttctttgcaaatggagatgacctcatagtggct
gtcagacatgaggatgaatgggtacttgactctttacaagcacccttccaagagcttgga
ttatcatataatttcgatgatagaaccacgaatagatcagaactttggtttatgtcacac
caaggcaaactgatagaggatatgtacatcccaaagcttgaagaggaacgtattgtttca
atcttagagtgggaccgagctgagcagccagaacacaggttagaggcaatttgcgctgca
atgattgaagcatggggtcatagtgaattactgcacaacatccgtttattttataaatgg
ataatcgaacaggcaccctattcaatgcttgtagcaaatggaaaagctccgtacatatca
gaagtggcattaagaaggctatatacaaatggagagaatgatgacgatgtcagtgaatat
ttgaaagctctctccaggagtcagaaagaaattgagaggcttgaaggtgatgactttgtt
ctacaccaagctggtgagactatcgatgcaggaaagagttcaggcaaagaagtgacagca
tcaaaacaaccgactaccagtcagccaacagaagcaaagactgttctagatcgagacgtc
aatgcaggaacacaggggactttcacaataccaaggcttaaaggaatgtcttcgaaattg
actctacccaaagtcagttctcaaagtgttgtaaatctagaacatctgttgaattataag
ccggatcaagttcatctaagcaatacacgggcattacagtcacaatttgcttcctggtat
aatggggtaaagaatgactatgatgttgatgatgaacagatgaaaattatcttgaatggc
ttaatggtttggtgtatagaaaatgggacatcgcctaacatcaacgggatgtgggtgatg
gttgatggtgaagagcagattgaatatccaattaagccattgattgaccatgccaaacct
tcatttagacaaatcatggcgcatttcagtaacctggctgaagcgtacattgagaagcgc
aattcggagaagtcttatatgccaagatatggacttcaaagaaatcttaccgatatgtca
ttagcgcgatatgcttttgatttctatgaaatgacatcaaaaactcccgttcgagcacgt
gaagctcatattcaaatgaaggctgcagctttgcgcaatgccaacaatcgaatgttcgga
ctggacggtaaggtaggcacacaggaggaggataccgaaaggcacactgctgaagatgtg
aacaggaatatgcacaatcttcttggtgttcgaggagtatga
DBGET
integrated database retrieval system
