KEGG   Viruses: 7751369
Entry
7751369           CDS       T40000                                 
Symbol
LNRSV_gp1
Name
(RefSeq) Ligustrum necrotic ringspot virus; replicase
  KO
K26628  Betaflexiviridae RNA replication polyprotein
Virus
478550  Ligustrum necrotic ringspot virus
SSDB
Motif
Pfam: Vmethyltransf RdRP_2 Viral_helicase1 Peptidase_C23 2OG-FeII_Oxy_2 AAA_22 2OG-FeII_Oxy AAA_19 AAA_16 DEAD AAA_5 AAA_30 PhoH
Other DBs
NCBI-GeneID: 7751369
NCBI-ProteinID: YP_001661446
RS: NC_010305
UniProt: B0LFB7
LinkDB
Position
NC_010305:71..5911
AA seq 1946 aa
MALTYRSPVEEVLTLLEPTAQSLIASTATQCYQNSEKENFAWFNFSLPAIAKEHLSKAGI
YLSPYSGYPHSHPVCKTLENYILYKVLPGIINNTFYFVGIKDFKLNFLKKRHKNLDLIKA
VNRYVSSADKIRYGNEFVVCGGPDLRAMNRHQSDLERPTLSSLVPNVKTGSNLFLHDELH
YWSKSELIAFLEIVEPKTMLGTVVYPTEIFAGARSSLNPWCYEFEIKGDKLIFYPDGVRA
EAYEQPLYGGYLLQANKIRLPSGKIYCVDVIASKFTHHLVAITAGDAVVPTNRSFGPFEA
VCSGELQKIGSGKTRFYPVSHSVLLRIYRYLRSLKKPDMQSAMAKFSQLCNEPSGAAISF
MEEFSHLVIHTGGIRTVLAPESIKSFFGNLSLALPGPLAAKINSARAVSLDLFISTLKPL
SVDLKLVQLEEYLSLPNFDFDSTLVENDADVVEQMESWAGTATSRVSQPYVGMVDLVYRR
HKWELDFNKEAFLKGFADFYYVATTCAGGKPSMSISQFVALVYPHVALLGRVCLSTLGAS
DLESISQYCEYLKLPKIELEEGLTWFLAHKKCRRPTMYLESKNWHDYTGMHESETFKPVK
PRWQFIPYNSEEELFKSELEPVPAHESQIPMAQERPAPEMPSASKSRANLIECSCGTSIT
VYDLPFASFHGLEFVDQLSTRKASWYSKESQPYKYNGGCHESLGWPEWLSAWCDINEIDG
KYNCLLAQEYQQGGKIGFHSDDEAIFETGESIYTVNVEGEADFGFKCNGETWFHLQKAQG
FEMPKGWQETHKHAVKQCSKGRISMTFRVLKRACNSPEAATPEEQEHDIESDSGHNPQDH
EEVSYTEGNVKITTKPMPENLKFNVIPNSGRGDCFWHALSYFTGATVEAMKSGVLQNSLI
AKTSRLVQQLEPHIWAEDEAICAACTHFNVNITILDFGQKSVLRYTVEDPLDGVQIKLEN
SHFEALQPVSACSLIAISELLQRSLVEITKAAIRNMGAAFEEELFKGKGVDLPTFTRLLQ
IFGIRGFLVKENETVEVNAEGTIPGKFKIEGDHISLILDRGKPRHKQTRVEQPNLAVGAE
QLLKFKEMCSETKYTPDPQRGMLLAQSLKEGRTGVLCSELYNDVDSLYPASPQEGSVNLM
LLLGTFGSGKSRCVKKLLEQIPGKSALYVSPRKSLCQAFEKDLKGMRDKIGKVGTKHFTS
ATFEKALLQMEHVIPGTLVLIDEVQLYPPGYIDLLLLKRGHDLKFVLLGDPCQSDYDSEK
DRVLFGAMKADIEIILDGCEYKYNVESHRFTEQLYLNRLPCSHSAGSFTASKGLKLKLIE
GLESLESLTDLRDVCLVSSFEEKKIVNAYFGASCACYTFGESTGMTFKNGSVLITGVSAH
TNEKRWLTALSRFRNGIALVNATGSSWNILARSYANRVLGRFLDARAAISDLKDMLPGKP
KFEHGFCMNTYGADEGKREEKLGGDPWLKTMVNLFQREDMEEIEMLREVLDDEWCKTHLP
QCELEGVRARWVHKILAKERREKRMGYLVSEQFTDEHSKQKGAQLTNAAERFECIYPRHR
ASDTVTFIMAVRKRLRFSDPMRENAKLMQAMPYGPYLLKEFLKRIPLKPMHNVRLMEEAK
FDFEEKKCSKSKATIENHSNRSCKDWLMDVGLVFSKSQLCTKFDNRFRDAKAAQTIVCFQ
HSVLCRFAPYMRYIEKKLMEVLPRQYYIHSGKGLDELNAWVKEGKFEGVCTESDYEAFDA
SQDQYIVAFEVNVMRYLGIPNDVINDYVFIKTHLGSKLGNFSIMRFSGEASTFLFNTMAN
MLFTFLRYSIKGNEYICFAGDDMCANTRLHISKEHESFLGKLKLKAKVDNTNHPTFCGWN
LSAHGIFKKPQLVFERLCIAKETNNLGNCIDNYAIEVSFAYKMGELAIQQMNEEEVDAFY
NCVRVIIKYKHLLKSDVVNVFSSGLM
NT seq 5841 nt   +upstreamnt  +downstreamnt
atggctctaacatacagaagtccagttgaggaagtgttgacactccttgaacccactgcg
caatcactaattgcaagcactgccacccaatgttaccaaaatagcgagaaagaaaatttc
gcgtggttcaattttagtttaccagctattgccaaagaacatcttagcaaggcaggtatt
tatctgagcccctattctggttatccacattcacacccagtgtgcaaaacccttgaaaat
tatatattgtataaagtgctaccaggtataattaataatactttttattttgtgggaatt
aaagatttcaaattaaatttccttaaaaaacgtcacaaaaacctagaccttattaaggct
gttaataggtatgttagtagtgcggataagattcggtatggtaatgagtttgtagtctgt
ggtgggcctgacttacgagcgatgaacagacatcaaagcgatctggaaaggccgaccttg
agctcccttgtgcccaatgtcaagacgggttctaatttgttcctgcacgacgagttgcat
tattggagcaaaagcgagttgatcgcttttctagaaattgtggagcccaaaacaatgctc
ggcacagtggtttacccgaccgaaattttcgctggtgcaaggagttctctgaatccgtgg
tgttatgaatttgaaataaagggggataagttaatcttttacccggacggagtcagggca
gaggcgtatgagcagcctctctatggcggttacctcttgcaggcaaacaaaattagactg
ccatcaggcaaaatctactgcgttgatgtgattgcaagcaagtttacgcatcatctggta
gcaattacagccggggatgcggtagtaccaacaaatcgctcatttggtccttttgaggcg
gtctgcagcggtgaattgcagaaaattggatcggggaaaacgcgcttctaccccgtatcg
catagcgtgctcctcagaatttataggtatctacgctccctgaagaagcctgacatgcaa
tccgccatggcgaaattctcgcagttatgtaatgagcctagcggagcggctataagtttc
atggaagaatttagccaccttgtcatccacacaggaggcattcgcacagtgctagcacct
gaaagcatcaagagcttcttcgggaatctcagcttggcccttccaggtcctttagctgct
aaaatcaatagcgctagggctgtcagcctggatctattcatctcaaccctgaagcccttg
agtgtggatctcaagcttgttcaattggaagaatatcttagtttacccaacttcgacttt
gatagtacactcgttgaaaatgatgcagatgtagtcgagcagatggaatcatgggccgga
acggcgacttccagggtgagccaaccctatgttggaatggtggacctagtgtacaggcgg
cacaagtgggagttggattttaacaaggaggctttcctcaaggggtttgcggatttctac
tatgtggctaccacttgcgcaggcgggaagcctagcatgagcatttcacaattcgtggct
ctagtgtacccacatgtagcgctacttggtcgtgtatgcctcagcacattaggtgcttct
gacctcgaaagcattagccagtactgcgagtacttgaaactgccaaagatagagttggag
gaaggtctcacttggtttctagcgcacaagaaatgtagaaggccgactatgtacttggag
agcaagaattggcatgattacactggcatgcatgagtcagaaactttcaaacctgtcaaa
ccaagatggcagttcatcccctacaattctgaggaagaacttttcaaatcggagctagaa
ccggtgcctgcacatgaatcgcaaataccaatggcgcaagaacgaccagcccctgaaatg
cccagtgccagtaaatcacgagcgaatcttatcgagtgcagttgtggtactagcattact
gtgtatgatttaccatttgcaagctttcatggtctagaatttgttgatcaattatcaaca
cgcaaagcttcatggtactccaaagaatcgcaaccctacaaatacaatggggggtgccat
gaatcactcggctggccggagtggttgtccgcgtggtgcgatattaacgagatcgatggt
aaatacaactgcttgctagcacaagaataccagcaaggtggaaagatcggattccattca
gatgatgaggcaatttttgagactggtgagagtatctacacagtgaatgttgaaggtgaa
gcggatttcggtttcaagtgcaacggcgaaacgtggttccacctacaaaaagctcaaggc
ttcgagatgcccaaagggtggcaagagacccacaaacacgctgttaagcaatgctcaaaa
ggtcgtatctctatgaccttcagagtactgaagagagcatgtaactcgcctgaggccgcc
accccagaggaacaagagcatgatattgagagcgattcggggcataaccctcaagaccat
gaagaggtctcatacactgagggcaatgtaaagatcaccaccaaacctatgcccgaaaat
ctgaaattcaatgtgatcccgaattcaggtcgtggtgactgcttttggcatgctctctca
tatttcactggagcaactgtggaagccatgaagtcaggtgtgctccaaaatagcttgatt
gctaaaacaagtcggttggtccagcaattggagccacacatctgggcggaggatgaagcc
atctgtgcagcatgtacacactttaatgttaatattacaatacttgattttgggcaaaaa
agtgtgttgaggtataccgttgaggaccctttggatggtgtgcaaatcaaattggagaac
tcacattttgaagcactacaacctgtgtccgcttgttcacttatagcaatttctgagctc
ctgcagaggagtttggttgagatcaccaaagcggcaataaggaatatgggtgcagccttc
gaagaggagttattcaagggcaaaggagtcgatttgcccacatttacaaggcttctacaa
atcttcggcatacgtggctttcttgtaaaagaaaacgaaaccgtggaagtcaatgcggag
ggcacgatccctggtaaattcaaaattgaaggtgatcacatctccctcattttggataga
ggcaaacctagacacaagcaaacacgggtggaacaaccaaaccttgcagtgggcgctgaa
caactcctcaaatttaaagaaatgtgctcagaaacaaaatatacaccggatccgcaaagg
gggatgcttctcgctcaaagtttgaaagaaggtagaacgggagtactgtgctctgagttg
tacaatgatgtcgatagcttgtatcctgcaagcccccaggagggttcagtaaatctaatg
cttctgctaggcacttttggaagtgggaagagcaggtgtgtgaaaaagctcttggaacag
ataccagggaagtctgctctttacgtgtcccctaggaaatccctatgtcaggccttcgag
aaagatttaaagggcatgagggacaaaatcggcaaggtcggcacaaagcattttacttca
gcgacattcgaaaaagccctcttgcaaatggaacatgtgatcccaggaactttagtactg
attgatgaggttcaactgtaccccccaggttatattgaccttttgctactcaagaggggg
catgatctcaaatttgtgttgctcggcgatccatgccaaagtgattacgattcggagaaa
gacagggtcctattcggcgccatgaaagccgacatagagattattctagatgggtgcgag
tacaagtacaacgttgagagccatagattcaccgagcagctctacttgaataggcttcca
tgctcccacagtgcaggctcattcaccgcgagtaaaggtctcaaattgaaattaatcgaa
ggccttgagagtttagaatctttgaccgatttgcgagacgtctgcttggtatcctccttc
gaggaaaagaagattgtgaatgcctactttggggcttcatgtgcatgttacaccttcggc
gaaagcacaggtatgactttcaaaaatggctccgtcttgattaccggtgtgtcagcccac
acgaatgagaaaaggtggttaacggctttgagtcgttttaggaacggaatagctctagtt
aacgccactggttctagttggaatatcctggcgaggtcatatgcaaatcgggtattaggc
cgttttctagacgcacgagctgctatttctgacctgaaagacatgcttccaggcaagccg
aaatttgagcacggtttctgcatgaacacttacggcgcagacgagggcaaacgcgaagag
aagttagggggcgacccctggctcaaaacaatggttaatcttttccaaagggaagatatg
gaggagatcgaaatgctcagagaagttctagatgatgagtggtgcaaaacccatctcccg
caatgcgagctcgagggcgtgagggctaggtgggttcacaaaatccttgcaaaagaaaga
cgtgaaaaacgtatgggatatctagtgtccgagcaattcactgacgaacactccaaacag
aagggagcacagttgacaaatgccgccgagcgcttcgagtgcatctaccccaggcatagg
gcctccgacacagtgactttcattatggctgtgcggaagaggttgcgattctctgatccc
atgcgtgaaaatgcaaaattgatgcaagccatgccttatggcccatacctgctcaaagaa
tttttaaagcgtattccgctcaagcccatgcacaatgtgcggttgatggaagaggctaaa
ttcgattttgaagagaaaaaatgcagcaagagtaaagctaccattgagaatcatagtaat
agatcttgcaaggattggctgatggatgtgggcttggtcttctccaaatctcaactgtgc
acgaagttcgacaatcgattcagggatgcaaaggcagcgcagacgattgtgtgctttcaa
cattcagttctctgccgttttgcaccttacatgcgttacatcgagaagaaactcatggag
gtactccccaggcagtattatatacactctggtaagggtctggatgaattgaacgcatgg
gtcaaagaaggaaaatttgagggtgtttgtactgagtcggattacgaagctttcgatgcg
agtcaggatcaatatatagtggcctttgaggtgaatgtgatgcggtatctgggcatacct
aatgatgtgatcaacgactacgtgttcatcaagacgcacctgggttcgaaattggggaat
ttctccattatgagattctctggtgaagcaagcacctttctgtttaacacaatggccaat
atgcttttcacattcctgagatatagcataaaaggtaacgagtacatttgcttcgccggg
gacgatatgtgtgcaaacaccaggctgcacatctcaaaagaacatgagagcttcttgggc
aaattgaagctgaaggcaaaggtagacaacacaaatcacccgaccttttgcgggtggaac
ctcagcgctcatggcatattcaagaagccacagttagtatttgagagattgtgcatagcc
aaggaaaccaacaacctgggcaactgcatagacaattatgccattgaagtttccttcgcg
tacaagatgggagaattggccatacaacaaatgaatgaggaagaggtggacgctttttat
aactgtgtgcgtgtgataattaaatacaaacacctcctcaagtctgacgtggtaaacgtc
ttctcaagcggtttgatgtag

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