Viruses: 80512414
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Entry
80512414 CDS
T40000
Symbol
26S_mRNA, QJ830_gp3
Name
(RefSeq) Venezuelan equine encephalitis virus; structural polyprotein
KO
K19288
Alphavirus structral polyprotein
Virus
11036
Venezuelan equine encephalitis virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Alpha_E1_glycop
Alpha_E2_glycop
Peptidase_S3
Alpha_E3_glycop
Motif
Other DBs
NCBI-GeneID:
80512414
NCBI-ProteinID:
YP_010775819
RS:
NC_075022
LinkDB
All DBs
Position
NC_075022:7562..11329
Genome browser
AA seq
1255 aa
AA seq
DB search
MFPFQPMYPMQPMPYRNPFAAPRRPWFPRTDPFLAMQVQELTRSMANLTFKQRRDAPPEG
PSAKKPKKEASQKQKGGGQGKKKKNQGKKKAKTGPPNPKAQNGNKKKTNKKPGKRQRMVM
KLESDKTFPIMLEGKINGYACVVGGKLFRPMHVEGKIDNDVLAALKTKKASKYDLEYADV
PQNMRADTFKYTHEKPQGYYSWHHGAVQYENGRFTVPKGVGAKGDSGRPILDNQGRVVAI
VLGGVNEGSRTALSVVMWNEKGVTVKYTPENCEQWSLVTTMCLLANVTFPCAQPPICYDR
KPAETLAMLSVNVDNPGYDELLEAAVKCPGRKRRSTEELFKEYKLTRPYMARCIRCAVGS
CHSPIAIEAVKSDGHDGYVRLQTSSQYGLDSSGNLKGRTMRYDMHGTIKEIPLHQVSLHT
SRPCHIVDGHGYFLLARCPAGDSITMEFKKDSVTHSCSVPYEVKFNPVGRELYTHPPEHG
VEQACQVYAHDAQNRGAYVEMHLPGSEVDSSLVSLSGSSVTVTPPVGTSALVECECGGTK
ISETINKTKQFSQCTKKEQCRAYRLQNDKWVYNSDKLPKAAGATLKGKLHVPFLLADGKC
TVPLAPEPMITFGFRSVSLKLHPKNPTYLTTRQLADEPHYTHELISEPAVRNFTVTEKGW
EFVWGNHPPKRFWAQETAPGNPHGLPHEVITHYYHRYPMSTILGLSICAAIATVSVAAST
WLFCRSRVACLTPYRLTPNARIPFCLAVLCCARTARAETTWESLDHLWNNNQQMFWIQLL
IPLAALIVVTRLLRCVCCVVPFLVMAGAAGAGAYEHATTMPSQAGISYNTIVNRAGYAPL
PISITPTKIKLIPTVNLEYVTCHYKTGMDSPAIKCCGSQECTPTYRPDEQCKVFTGVYPF
MWGGAYCFCDTENTQVSKAYVMKSDDCLADHAEAYKAHTASVQAFLNITVGEHSIVTTVY
VNGETPVNFNGVKLTAGPLSTAWTPFDRKIVQYAGEIYNYDFPEYGAGQPGAFGDIQSRT
VSSSDLYANTNLVLQRPKAGAIHVPYTQAPSGFEQWKKDKAPSLKFTAPFGCEIYTNPIR
AENCAVGSIPLAFDIPDALFTRVSETPTLSAAECTLNECVYSSDFGGIATVKYSASKSGK
CAVHVPSGTATLKEAAVELTEQGSATIHFSTANIHPEFRLQICTSYVTCKGDCHPPKDHI
VTHPQYHAQTFTAAVSKTAWTWLTSLLGGSAVIIIIGLVLATIVAMYVLTNQKHN
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgttcccgttccagccaatgtatccgatgcagccaatgccctatcgcaacccgttcgcg
gccccgcgcaggccctggttccccagaaccgacccttttctggcgatgcaggtgcaggaa
ttaacccgctcgatggctaacctgacgttcaagcaacgccgggacgcgccacctgagggg
ccatccgctaagaaaccgaagaaggaggcctcgcaaaaacagaaagggggaggccaaggg
aagaagaagaagaaccaagggaagaagaaggctaagacagggccgcctaatccgaaggca
cagaatggaaacaagaagaagaccaacaagaaaccaggcaagagacagcgcatggtcatg
aaattggaatctgacaagacgttcccaatcatgttggaagggaagataaacggctacgct
tgtgtggtcggagggaagttattcaggccgatgcatgtggaaggcaagatcgacaacgac
gttctggccgcgcttaagacgaagaaagcatccaaatacgatcttgagtatgcagatgtg
ccacagaacatgcgggccgatacattcaaatacacccatgagaaaccccaaggctattac
agctggcatcatggagcagtccaatatgaaaatgggcgtttcacggtgccgaaaggagtt
ggggccaagggagacagcggacgacccattctggataaccagggacgggtggtcgctatt
gtgctgggaggtgtgaatgaaggatctaggacagccctttcagtcgtcatgtggaacgag
aagggagttaccgtgaagtatactccggagaactgcgagcaatggtcactagtgaccacc
atgtgtctgctcgccaatgtgacgttcccatgtgctcaaccaccaatttgctacgacaga
aaaccagcagagactttggccatgctcagcgttaacgttgacaacccgggctacgatgag
ctgctggaagcagctgttaagtgccccggaaggaaaaggagatccaccgaggagctgttt
aaggagtataagctaacgcgcccttacatggccagatgcatcagatgtgcagttgggagc
tgccatagtccaatagcaatcgaggcagtaaagagcgacgggcacgacggttatgttaga
cttcagacttcctcgcagtatggcctggattcctccggcaacttaaagggcaggaccatg
cggtatgacatgcacgggaccattaaagagataccactacatcaagtgtcactccataca
tctcgcccgtgtcacattgtggatgggcacggttatttcctgcttgccaggtgcccggca
ggggactccatcaccatggaatttaagaaagattccgtcacacactcctgctcggtgccg
tatgaagtgaaatttaatcctgtaggcagagaactctatactcatcccccagaacacgga
gtagagcaagcgtgccaagtctacgcacatgatgcacagaacagaggagcttatgtcgag
atgcacctcccgggctcagaagtggacagcagtttggtttccttgagcggcagttcagtc
accgtgacacctcctgttgggactagcgccctggtggaatgcgagtgtggcggcacaaag
atctccgagaccatcaacaagacaaaacagttcagccagtgcacaaagaaggagcagtgc
agagcatatcggctgcagaacgataagtgggtgtataattctgacaaactgcccaaagca
gcgggagccaccttaaaaggaaaactgcatgtcccattcttgctggcagacggcaaatgc
accgtgcctctagcaccagaacctatgataacctttggtttcagatcagtgtcactgaaa
ctgcaccctaagaatcccacatatctaaccacccgccaacttgctgatgagcctcactac
acgcacgagctcatatctgaaccagctgttaggaattttaccgtcaccgaaaaagggtgg
gagtttgtatggggaaaccacccgccgaaaaggttttgggcacaggaaacagcacccgga
aatccacatgggctaccgcacgaggtgataactcattattaccacagataccctatgtcc
accatcctgggtttgtcaatttgtgccgccattgcaaccgtttccgttgcagcgtctacc
tggctgttttgcagatctagagttgcgtgcctaactccttaccggctaacacctaacgct
aggataccattttgtctggctgtgctttgctgcgcccgcactgcccgggccgagaccacc
tgggagtccttggatcacctatggaacaataaccaacagatgttctggattcaattgctg
atccctctggccgccttgatcgtagtgactcgcctgctcaggtgcgtgtgctgtgtcgtg
ccttttttagtcatggccggcgccgcaggcgccggcgcctacgagcacgcgaccacgatg
ccgagccaagcgggaatctcgtataacactatagtcaacagagcaggctacgcaccactc
cctatcagcataacaccaacaaagatcaagctgatacctacagtgaacttggagtacgtc
acctgccactacaaaacaggaatggattcaccagccatcaaatgctgcggatctcaggaa
tgcactccaacttacaggcctgatgaacagtgcaaagtcttcacaggggtttacccgttc
atgtggggtggtgcatattgcttttgcgacactgagaacacccaagtcagcaaggcctac
gtaatgaaatctgacgactgccttgcggatcatgctgaagcatataaagcgcacacagcc
tcagtgcaggcgttcctcaacatcacagtgggagaacactctattgtgactaccgtgtat
gtgaatggagaaactcctgtgaatttcaatggggtcaaattaactgcaggtccgctttcc
acagcttggacaccctttgatcgcaaaatcgtgcagtatgccggggagatctataattat
gattttcctgagtatggggcaggacaaccaggagcatttggagatatacaatccagaaca
gtctcaagctcagatctgtatgccaataccaacctagtgctgcagagacccaaagcagga
gcgatccacgtgccatacactcaggcaccttcgggttttgagcaatggaagaaagataaa
gctccatcattgaaatttaccgcccctttcggatgcgaaatatatacaaaccccattcgc
gccgaaaactgtgctgtagggtcaattccattagcctttgacattcccgacgccttgttc
accagggtgtcagaaacaccgacactttcagcggccgaatgcactcttaacgagtgcgtg
tattcttccgactttggtgggatcgccacggtcaagtactcggccagcaagtcaggcaag
tgcgcagtccatgtgccatcagggactgctaccctaaaagaagcagcagtcgagctaacc
gagcaagggtcggcgactatccatttctcgaccgcaaatatccacccggagttcaggctc
caaatatgcacatcatatgttacgtgcaaaggtgattgtcaccccccgaaagaccatatt
gtgacacaccctcagtatcacgcccaaacatttacagccgcggtgtcaaaaaccgcgtgg
acgtggttaacatccctgctgggaggatcagccgtaattattataattggcttggtgctg
gctactattgtggccatgtacgtgctgaccaaccagaaacataattga
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