Viruses: 80527605
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Entry
80527605 CDS
T40000
Symbol
L, QKC79_gp6
Name
(RefSeq) Respirovirus muris; Large protein
KO
K25521
Respirovirus RNA-directed RNA polymerase L [EC:
2.7.7.48
3.6.1.-
2.7.7.88
2.1.1.375
]
Virus
3052731
Respirovirus muris
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Mononeg_RNA_pol
Mononeg_mRNAcap
Motif
Other DBs
NCBI-GeneID:
80527605
NCBI-ProteinID:
YP_010790275
RS:
NC_075392
UniProt:
A6P4U7
LinkDB
All DBs
Position
NC_075392:8556..15242
AA seq
2228 aa
AA seq
DB search
MDGQESSQNPSDILYPECHLNSPIVRGKIAQLHVLLDVNQPYRLKDDSIINITKHKIRNG
GLSPRQIKIRSLGKALQRTIKDLDRYTFEPYPTYSQELLRLDIPEICDKIRSVFAVSDRL
TRELSSGFQDLWLNIFKQLGNIEGREGYDPLQDIGTIPEITDKYSRNRWYRPFLTWFSIK
YDMRWMQKTRPGGPLDTSNSHNLLECKSYTLVTYGDLIMILNKLTLTGYILTPELVLMYC
DVVEGRWNMSAAGHLDKKSIGITSKGEELWELVDSLFSSLGEEIYNVIALLEPLSLALIQ
LNDPVIPLRGAFMRHVLTELQAVLTSRDVYTDAEADTIVESLLAIFHGTSIDEKAEIFSF
FRTFGHPSLEAVTAADKVRAHMYAQKAIKLKTLYECHAVFCTIIINGYRERHGGQWPPCD
FPDHVCLELRNAQGSNTAISYECAVDNYTSFIGFKFRKFIEPQLDEDLTIYMKDKALSPR
KEAWDSVYPDSNLYYKAPESEETRRLIEVFINDENFNPEEIINYVESGDWLKDEKFNISY
SLKEKEIKQEGRLFAKMTYKMRAVQVLAETLLAKGIGELFSENGMVKGEIDLLKRLTTLS
VSGVPRTDSVYNNSKSSEKRNEGMKKKNSGGYWDEKKRSRHEFKATDSSTDGYETLSCFL
TTDLKKYCLNWRFESTALFGQRCNEIFGFKTFFNWMHPVLERCTIYVGDPYCPVADRMHR
QLQDHADSGIFIHNPRGGIEGYCQKLWTLISISAIHLAAVRVGVRVSAMVQGDNQAIAVT
SRVPVAQTYKQKKNHVYKEITKYFGALRHVMFDVGHELKLNETIISSKMFVYSKRIYYDG
KILPQCLKALTRCVFWSETLVDENRSACSNISTSIAKAIENGYSPILGYCIALYKTCQQV
CISLGMTINPTISPTVRDQYFKGKNWLRCAVLIPANVGGFNYMSTSRCFVRNIGDPAVAA
LADLKRFIRADLLDKQVLYRIMNQEPGDSSFLDWASDPYSCNLPHSQSITTIIKNITARS
VLQESPNPLLSGLFTETSGEEDLNLASFLMDRKVILPRVAHEILGNSLTGVREAIAGMLD
TTKSLVRASVKKGGLSYGILRRLVNYDLLQYETLTRTLRKPVKDNIEYEYMCSVELAVGL
RQKMWIHLTYGRPIHGLETPDPLELLRGTFIEGSEVCKLCRSEGADPIYTWFYLPDNIDL
DTLTNGSPAIRIPYFGSATDERSEAQLGYVRNLSKPAKAAIRIAMVYTWAYGTDEISWME
AALIAQTRANLSLENLKLLTPVSTSTNLSHRLKDTATQMKFSSATLVRASRFITISNDNM
ALKEAGESKDTNLVYQQIMLTGLSLFEFNMRYKKGSLGKPLILHLHLNNGCCIMESPQEA
NIPPRSTLDLEITQENNKLIYDPDPLKDVDLELFSKVRDVVHTVDMTYWSDDEVIRATSI
CTAMTIADTMSQLDRDNLKEMIALVNDDDVNSLITEFMVIDVPLFCSTFGGILVNQFAYS
LYGLNIRGREEIWGHVVRILKDTSHAVLKVLSNALSHPKIFKRFWNAGVVEPVYGPNLSN
QDKILLALSVCEYSVDLFMHDWQGGVPLEIFICDNDPDVADMRRSSFLARHLAYLCSLAE
ISRDGPRLESMNSLERLESLKSYLELTFLDDPVLRYSQLTGLVIKVFPSTLTYIRKSSIK
VLRTRGIGVPEVLEDWDPEADNALLDGIAAEIQQNIPLGHQTRAPFWGLRVSKSQVLRLR
GYKEITRGEIGRSGVGLTLPFDGRYLSHQLRLFGINSTSCLKALELTYLLSPLVDKDKDR
LYLGEGAGAMLSCYDATLGPCINYYNSGVYSCDVNGQRELNIYPAEVALVGKKLNNVTSL
GQRVKVLFNGNPGSTWIGNDECEALIWNELQNSSIGLVHCDMEGGDHKDDQVVLHEHYSV
IRIAYLVGDRDVVLISKIAPRLGTDWTRQLSLYLRYWDEVNLIVLKTSNPASTEMYLLSR
HPKSDIIEDSKTVLASLLPLSKEDSIKIEKWILIEKAKAHEWVTRELREGSSSSGMLRPY
HQALQTFGFEPNLYKLSRDFLSTMNIADTHNCMIAFNRVLKDTIFEWARITESDKRLKLT
GKYDLYPVRDSGKLKTVSRRLVLSWISLSMSTRLVTGSFPDQKFEARLQLGIVSLSSREI
RNLRVITKTLLDRFEDIIHSITYRFLTKEIKILMKILGAVKMFGARQNEYTTVIDDGSLG
DIEPYDSS
NT seq
6687 nt
NT seq
+upstream
nt +downstream
nt
atggatgggcaggagtcctcccaaaacccctctgacatactctatccagaatgccacctg
aactctcccatagtcagggggaagatagcacagttgcacgtcttgttagatgtgaaccag
ccctacagactaaaggacgacagcataataaatattacaaagcacaaaattaggaacgga
ggattgtcccctcgtcaaattaagatcaggtctctgggtaaggctcttcaacgcacaata
aaggatttagaccgatacacctttgaaccgtacccaacctactctcaggaattacttagg
cttgatataccagagatatgtgacaaaatccgatccgtcttcgcggtctcggatcggctg
accagggagttatctagtgggttccaggatctttggttgaatatcttcaagcaactaggc
aatatagaaggaagagaggggtacgatccgttgcaggatatcggcaccatcccggagata
actgataaatacagcaggaatagatggtataggccattcctaacttggttcagcatcaaa
tatgacatgcggtggatgcagaagaccagaccggggggacccctcgatacctctaattca
cataacctcctagaatgcaaatcatacactctagtaacatacggagatcttatcatgata
ctgaacaagttgacattgacagggtatatcctaacccctgagctggtcttgatgtattgt
gatgttgtagagggaaggtggaatatgtctgctgcagggcatctagataagaagtccatt
gggataacaagcaaaggtgaggaattatgggaactagtggattccctcttctcaagtctt
ggagaggaaatatacaatgtcatcgcactattggagcccctatcacttgctctcatacaa
ctaaatgatcctgttatacctctacgtggggcatttatgaggcatgtgttgacagagcta
caggctgttttaacaagtagggacgtgtacacagatgctgaagcagacactattgtggag
tcgttactcgccattttccatggaacctctattgatgagaaagcagagatcttttccttc
tttaggacatttggccaccccagcttagaggctgtcactgccgccgacaaggtaagggcc
catatgtatgcacaaaaggcaataaagcttaagaccctatacgagtgtcatgcagttttt
tgcactatcatcataaatgggtatagagagaggcatggcggacagtggcccccctgtgac
ttccctgatcacgtgtgtctagaactaaggaacgctcaagggtccaatacggcaatctct
tatgaatgtgctgtagacaactatacaagtttcataggcttcaagtttcggaagtttata
gaaccacaactagatgaagatctcacaatatatatgaaagacaaagcactatcccccagg
aaggaggcatgggactctgtatacccggatagtaatctgtactataaagccccagaatct
gaagagacccggcggcttattgaagtgttcataaatgatgagaatttcaacccagaagaa
attatcaattatgtggagtcaggagattggttgaaagacgagaagttcaacatctcgtac
agtctcaaagagaaagagatcaagcaagagggtcgtctattcgcaaaaatgacttataag
atgcgagccgtacaggtgctggcagagacactactggctaaaggaataggagagctgttc
agcgaaaatgggatggttaaaggagagatagacctacttaaaagattgactactctttct
gtctcaggagtccccaggactgattcagtgtacaataactctaaatcatcagagaagaga
aacgaaggcatgaaaaagaagaactctggggggtactgggacgaaaagaagaggtccaga
catgaattcaaggcaacagattcatcaacagacggctatgaaacgttaagttgcttcctc
acaacagacctcaagaaatactgcttaaactggagatttgaaagtactgcattgtttggt
cagagatgcaacgagatatttggcttcaagaccttctttaactggatgcatccagtcctt
gaaaggtgtacaatatatgttggggatccttactgtccagtcgccgaccggatgcatcga
caactccaggatcatgcagactctggcattttcatacataatcctagggggggcatagaa
ggttactgccagaagctgtggaccttaatctcaatcagtgcaatccacctagcagctgtg
agagtgggtgtcagggtctctgcaatggttcagggtgacaatcaagctatagccgtgaca
tcaagagtacctgtagctcagacttacaagcagaagaaaaatcatgtctataaggagatc
accaaatattttggtgctctaagacacgtcatgtttgatgtagggcacgagctaaaattg
aacgagaccatcattagtagcaagatgtttgtctatagtaaaagaatatactatgatggg
aagattttaccacagtgcctgaaagccttgaccaggtgtgtattctggtccgagacactg
gtagatgaaaacagatctgcttgttcgaacatctcaacatccatagcaaaagctatcgaa
aatgggtattctcctatactaggctactgcattgcgttgtataagacctgtcagcaggtg
tgcatatcactagggatgactataaatccaactatcagcccgaccgtaagagatcaatac
tttaagggtaagaattggctgagatgtgcagtgttgattccagcaaatgttggaggattc
aactacatgtctacatctagatgctttgttagaaatattggagaccccgcagtagcagcc
ctagctgatctcaaaagattcatcagagcggatctgttagacaagcaggtactatacagg
atcatgaatcaagaacccggtgactctagctttctagattgggcttcagacccttattca
tgtaacctcccgcattctcagagtataactacgattataaagaatatcactgctagatct
gtgctgcaggaatccccgaatcctctactgtctggtctcttcaccgagactagtggagaa
gaggatctcaacctggcctcgttccttatggaccggaaagtcatcctgccgagagtggct
catgagatcctgggtaattccttaactggagttagggaggcgattgcagggatgcttgat
acgaccaagtctctagtgagagccagcgttaagaaaggaggattatcatatgggatattg
aggaggcttgtcaattatgatctattgcagtacgagacactgactagaactctcaggaaa
ccggtgaaagacaacatcgaatatgagtatatgtgttcagttgagctagctgtcggtcta
aggcagaaaatgtggatccacctaacttacgggagacccatacatgggctagaaacacca
gaccctttagagctcttgaggggaacatttatcgaaggttcagaggtgtgcaagctttgc
aggtctgagggagcagaccccatctatacatggttctatctccctgacaatatagacctg
gacacgcttacaaacggaagtccggctataagaatcccctattttggatcagccactgat
gaaaggtcggaagcccaactcgggtatgtaagaaatctaagcaaacccgcaaaggcggcc
atccggatagctatggtgtatacgtgggcctacgggactgatgagatatcgtggatggaa
gccgctcttatagcccaaacaagagccaatctgagcttagagaatctaaagctgctgact
cctgtttcaacctccactaatctatctcataggttgaaagatacggcaacccagatgaag
ttctctagtgcaacactagtccgtgcaagtcggttcataacaatatcaaatgataacatg
gcactcaaagaagcaggggagtcgaaggatactaatctcgtgtatcagcagattatgcta
actgggctaagcttgttcgagttcaatatgagatataagaaaggttccttagggaagcca
ctgatattgcacttacatcttaataacgggtgctgtataatggagtccccacaggaggcg
aatatccccccaaggtccacattagatttagagattacacaagagaacaataaattgatc
tatgatcctgatccactcaaggatgtggaccttgagctatttagcaaggtcagagatgtt
gtacatacagttgacatgacttattggtcagatgatgaagttatcagagcaaccagtatc
tgtactgcaatgacgatagctgatacaatgtctcaattagatagagacaacctaaaagag
atgatcgcgctagtaaatgacgatgatgtcaacagcctgattactgagtttatggtgatt
gatgttcctttattttgctcaacgttcgggggtattctagtcaatcagtttgcatactca
ctctacggcttaaacatcagaggaagggaagaaatatggggacatgtagtccggattctt
aaagatacctcccacgcagttctaaaagtcttatctaatgctctatctcatcccaaaatc
ttcaaacgattctggaatgcaggtgtcgtggaacctgtgtatgggcctaacctctcaaat
caggacaagatactcttggccctctctgtctgtgaatattctgtggatctattcatgcac
gattggcaagggggtgtaccgcttgagatctttatctgtgacaatgacccagatgtggcc
gacatgaggaggtcctctttcttggcaagacatcttgcatacctatgcagcttggcagag
atatctagggatgggccaagattagaatcaatgaactctctagagaggctcgagtcacta
aagagttacctggaactcacatttcttgatgacccggtactgaggtacagtcagttgact
ggcctagtcatcaaagtattcccatctactttgacctatatccggaagtcatctataaaa
gtgttaaggacaagaggtataggagtccctgaagtcttagaagattgggatcccgaggca
gataatgcactgttagatggtatcgcggcagaaatacaacagaatattcctttgggacat
cagactagagcccctttttgggggttgagagtatccaagtcacaggtactgcgtctccgg
gggtacaaggagatcacaagaggtgagataggcagatcaggcgttggtctgacgttacca
ttcgatggaagatatctatctcaccagctgaggctctttggcatcaacagtactagctgc
ttgaaagcacttgaacttacctacctattgagccccttagttgacaaggataaagatagg
ctatatttaggggaaggagctggggccatgctttcctgttatgacgctactcttggccca
tgcatcaactattataactcaggggtatactcttgtgatgtcaatgggcagagagagtta
aatatatatcctgctgaggtggcactggtgggaaagaaattaaacaatgttactagtctg
ggtcaaagagttaaagtgttattcaacgggaatcctggctcgacatggattggaaatgat
gagtgtgaggctttgatttggaatgaattgcagaatagctcgataggcctagtccactgt
gacatggagggaggagatcataaggatgatcaagttgtactgcatgagcattacagtgta
atccggatcgcgtatctggtgggggatcgagacgttgtgcttataagcaagattgctcct
aggctgggcacggattggaccaggcagctcagcctatatctgagatactgggacgaggtt
aacctaatagtgcttaaaacatctaaccctgcttccacagagatgtatctcctatcgagg
caccccaaatctgacattatagaggacagcaagacggtgttagctagtctcctccctttg
tcaaaagaagatagcatcaagatagaaaagtggatcttaatagagaaggcaaaggctcac
gaatgggttactcgggaattgagagaaggaagctcttcatcagggatgcttagaccttac
catcaagcactgcagacgtttggctttgaaccaaacttgtataaattgagcagagatttc
ttgtccaccatgaacatagctgatacacacaactgcatgatagctttcaacagggttttg
aaggatacaatcttcgaatgggctagaataactgagtcagataaaaggcttaaactaact
ggtaagtatgacctgtatcctgtgagagattcaggcaaattgaagacagtttctagaaga
cttgtgctatcttggatatctttatctatgtccacaagattggtaactgggtcattccct
gaccagaagtttgaagcaagacttcaattgggaatagtttcattatcatcccgtgaaatc
aggaacctgagggttatcacaaaaactttattagacaggtttgaggatattatacatagt
ataacgtacagattcctcaccaaagaaataaagattttgatgaagattttaggggcagtc
aagatgttcggggccaggcaaaatgaatacacgaccgtgattgatgatggatcactgggt
gatatcgagccatatgacagctcgtaa
DBGET
integrated database retrieval system
