Viruses: 80527637
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Entry
80527637 CDS
T40000
Symbol
L, QKC91_gp6
Name
(RefSeq) avian paramyxovirus 1; RNA-dependent RNA polymerase
Virus
2560319
avian paramyxovirus 1
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Mononeg_RNA_pol
Mononeg_mRNAcap
Motif
Other DBs
NCBI-GeneID:
80527637
NCBI-ProteinID:
YP_010790291
RS:
NC_075404
UniProt:
Q6Q326
LinkDB
All DBs
Position
NC_075404:8381..14995
AA seq
2204 aa
AA seq
DB search
MASFGPERAEHQIILPESHLSSPLVKHKLLYYWKLTGLPLPDECDFDHLILSRQWKKILE
SASPDTERMIKLGRAVHQTLNHNSRITGVLHPRCLEELASIEVSDSTNKFRKIEKKIQIH
NTRYGELFTRLCTHVERKLLGSSWSNNVPRSEEFNSIRTDPAFWFHSKWSTAKFAWLHIK
QIQRHLIVAARTRSAANKLVTLTHKVGQVFVTPELVIVTHTDENKFTCLTQELVLMYADM
MEGRDMVNIISSTAAHFRSLSEKIDDILRLVDALAKVLGNQVYDVVALMEGFAYGAVQLL
EPSGTFAGDFFAFNLQELKDTLIGFLPKDIAESVTHAIATVFSGLEQNQAAEMLCLLRLW
GHPLLESRIAAKAVRSQMCAPKMVDFDMILQVLSFFKGTIINGYRKKNAGVWPRVKVDTI
YGKVIGQLHADSAEISHDIMLREYKSLSALEFEPCIEYDPVTNLSMFLKDKAIAHPKDNW
LASFRRNLLSEDQKKHVKEATSTNRLLIEFLESNDFDPYKEMEYLTTLEYLRDDNVAVSY
SLKEKEVKVNGRIFAKLTKKLRNCQVMAEGILADQIAPFFQGNGVIQDSISLTKSMLAMS
QLSFNSNKKRITDCKERVSSNRNHDQKSKNRRRVATFITTDLQKYCLNWRYQTVKLFAHA
INQLMGLPHFFEWIHLRLMDTTMFVGDPFNPPSDPTDCDLSRVPNDDIYIVSARGGIEGL
CQKLWTMISIAAIQLAAARSHCRVACMVQGDNQVIAVTREVRSDDSPEMVLTQLHQASDN
FFKELIHVNHSIGHNLKDRETIRSDTFFIYSKRIFKDGAILSQVLKNSSKLVLISGDLSE
NTVMSCANIASTIARLCENGLPKDFCYYLNYLMSCVQTYFDSEFSITNSSHPDFNQSWIE
DISFVHSYVLTPAQLGGLSNLQYSRLYTRNIGDPGTTAFAEIKRLEAVGLLSPSIMTNIL
TRPPGNGDWASLCNDPYSFNFETVASPNIVLKKHTQRVLFETCSNPLLSGVHTEDNEAEE
KALAEFLLNQEVIHPRVAHAIMEASSVGRRKQIQGLVDTTNTVIKIALTRRPLGIKRLMR
IVNYSSMHAMLFRDDVFSSNRSNHPLVSSNMCSLTLADYARNRSWSPLTGGRKILGVSNP
DTIELVEGEILSVSGGCTRCDSGDEQFTWFHLPSNIELTDDTSKNPPMRVPYLGSKTQER
RAASLAKIAHMSPHVKAALRASSVLIWAYGDNEVNWTAALKIARSRCNINSEYLRLLSPL
PTAGNLQHRLDDGITQMTFTPASLYRVSPYIHISNDSQRLFTEEGVKEGNVVYQQIMLLG
LSLIESLFPMTTTRTYDEITLHLHSKFSCCIREAPVAVPFELLGVAPELRPVTSNKFMYD
PSPVSEGDFARLDLAIFKSYELNLESYPTIELMNILSISSGKLIGQSVVSYDEDTSIKND
AIIVYDNTRNWISEAQNSDVVRLFEYAALEVLLDCSYQLYYLRVRGLDNIVLYMSDLYKN
MPGILLSNIAATISHPIIHSRLHAVGLVNHNGSHQLADTDFIEMSAKLLVSCTRRVVSGL
YAGNKYDLLFPSVLDDNLSEKMLQLISRLCCLYTVLFATTREIPKIRGLSAEEKCSVLTE
YLLSDAVKPLLSSEQVSSIMSPNIVTFPANLYYMSRKSLNLIREREDRDTILALLFPQEP
LLEFPLVQDIGARVKDPFTRQPAAFLQELDLSAPARYDAFTLSQVHSEHISPSPEEDYLV
RYLFRGIGTASSSWYKASHLLSVPEVRCARHGNSLYLAEGSGAIMSLLELHVPHETIYYN
TLFSNEMNPPQRHFGPTPTQFLNSVVYRNLQAEVPCKDGFVQEFRPLWRENTEESDLTSD
KAVGYITSAVPYRSVSLLHCDIEIPPGSNQSLLDQLATNLSLIAMHSVREGGVVIIKVLY
AMGYYFHLLMNLFTPCSTKGYILSNGYACRGDMECYLVFVMGYLGGPTFVHEVVRMAKTL
VQRHGTLLSKSDEITLTRLFTSQRQRVTDILSSPLPRLMKFLRKNIDTALIEAGGQPVRP
FCAESLVSTLADITQMTQIIASHIDTVIRSVIYMEAEGDLADTVFLFTPYNLSTDGKKRT
SLKQCTRQILEVTILGLRVENLNKVGDVISLVLKGMISLEDLIPLRTYLKRSTCPKYLKA
VLGITKLKEMFTDTSLLYLTRAQQKFYMKTIGNAVKGYYSNCDS
NT seq
6615 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcttcggtcccgaaagggcggagcatcagattatcctaccagagtcacacctg
tcctcaccattggtcaagcacaaactactctattactggaaattaactgggctaccgctc
cctgacgagtgtgacttcgaccacctcattctcagccgacaatggaagaaaatacttgaa
tcggcctctcctgacactgagagaatgataaaacttggaagggcagtacaccagactctc
aaccacaattccaggataaccggagtactccatcccaggtgtttagaagaactggctagt
attgaggtctctgattcgaccaacaagtttcggaagatcgagaagaagatccaaattcac
aacacaagatatggagaactgttcacaaggctgtgcacgcatgtagagaggaaattgttg
gggtcatcttggtctaataatgtcccccggtcagaagagttcaacagcatccgtacagat
ccggcattctggtttcactcaaaatggtccacagccaagtttgcatggctccatataaaa
cagatccaaaggcatctgattgtggcagcaagaacaaggtccgcagctaacaaattggtg
acgctgacccataaggtaggccaagtctttgttactcctgagcttgtcattgtgacacat
acagatgagaacaagttcacgtgtcttacccaggaacttgtgttgatgtatgcagatatg
atggagggcagagatatggtcaacataatatcatctacggcagcacatttcaggagccta
tcagagaaaattgatgacattctgcggttagtagatgctctggcaaaagttttgggcaat
caagtctacgatgttgtagcactcatggagggatttgcatacggcgccgtccagctgctt
gagccgtcaggtacatttgcaggggatttcttcgcattcaacctgcaggagctcaaagac
actttgatcggcttccttcccaaggatatagcagaatccgtgactcacgcaatagccact
gtattctctggcttagaacaaaatcaagcagctgagatgttgtgtctgttgcgtctgtgg
ggccacccactacttgagtcccgtattgcagcaaaagcagtaaggagccaaatgtgcgca
ccaaaaatggtagactttgatatgatcctccaggtattgtctttctttaaaggaacaatc
atcaacgggtacagaaagaagaatgcaggtgtttggccacgtgtcaaggtggatacgata
tacgggaaggtcattggccagctacacgctgattcagcagagatttcacacgatatcatg
ttgagagagtataagagtttatctgcgcttgaattcgagccatgtatagaatacgaccct
gtcactaatctgagcatgttcctaaaagacaaggcgattgcacacccgaaagacaactgg
ctcgcctcgtttaggcgaaaccttctctctgaggaccaaaagaaacatgtaaaggaggca
acctcgactaaccgtctcttgatagagttcttagagtcgaatgattttgatccatataag
gagatggaatatctgacgacccttgagtatctaagagatgacaatgtggcagtatcatac
tcgctaaaagagaaggaggtgaaggttaatgggcggattttcgctaagctaacaaagaaa
ttaaggaactgtcaagtgatggcagaagggatcttagctgaccagattgcacctttcttt
caggggaatggggtcattcaggatagcatatctttaaccaagagtatgctagcgatgagt
caactgtctttcaacagcaataagaaacgtatcactgactgcaaagaaagagtatcctca
aaccgcaatcacgatcagaaaagcaagaatcgtcggagagttgccacttttataacgact
gacctgcaaaagtactgtcttaattggagatatcagacagtcaaactgttcgctcatgcc
atcaatcagctgatgggcctacctcacttcttcgagtggattcatctaagactaatggat
actacaatgtttgtaggagaccctttcaatcccccaagtgaccctactgactgtgatctc
tcaagagtcccaaatgatgacatatatattgtcagtgctagagggggtattgagggatta
tgtcagaagctatggacaatgatctcaattgctgcaatccaacttgctgcagcaagatca
cattgtcgcgtcgcctgtatggtacagggtgacaatcaagtaatagctgtaacgagagag
gtaaggtcagatgactccccggagatggtgttaacacaactgcatcaagccagtgataat
ttcttcaaggaattgattcatgttaatcattcgattggccataatttgaaggatcgtgaa
actatcaggtcagacacatttttcatatacagcaaacggatattcaaagatggagcaata
ctcagtcaggtcctcaaaaattcatctaaattagtgctaatatcaggcgaccttagtgaa
aacaccgtaatgtcctgtgccaacattgcatctactatagcacggctgtgcgagaacggg
ctccccaaggacttctgttattacttaaactacctaatgagttgcgtgcagacatacttc
gattctgagttttccatcaccaatagctcgcaccctgattttaaccagtcgtggattgaa
gacatctcttttgtgcactcatatgtcctgacccctgcccagctagggggactgagtaac
cttcaatactcaaggctctacacgagaaacatcggtgacccgggaactactgcttttgca
gagatcaagcgattagaggcagtggggttactgagtcctagcattatgactaacatctta
actaggccgcctgggaatggagattgggccagtctgtgcaatgacccatactctttcaat
tttgagactgtcgcgagcccgaatatcgtcctcaagaaacatacacaaagagtcttattt
gaaacctgttcaaatcccctattatctggagtgcatacagaagataatgaggcagaggag
aaggcattggctgaatttttactcaatcaagaagtaattcatccacgtgtcgcacatgct
atcatggaagcaagctctgtaggtaggaggaagcagattcaggggcttgttgacacaaca
aacaccgtaatcaagattgcattgactaggaggccacttggcatcaagaggctgatgcgg
atagttaactactcgagcatgcatgcaatgctgtttagagacgatgttttctcatccaac
agatccaaccaccccttagtctcttctaatatgtgttctctgacgctggcagactatgca
cggaatagaagctggtcacctttgacggggggtagaaagatactgggcgtatctaatcct
gataccatagaactcgtagagggtgagatccttagcgtcagcggagggtgcacaagatgt
gacagcggagatgaacagttcacttggttccatcttccgagcaatatagagctgaccgat
gacaccagcaagaatcctccgatgagagtgccgtatctcgggtcaaagactcaagagagg
agagctgcctcgcttgcgaaaatagctcatatgtcaccacatgtgaaagctgctctaagg
gcatcatctgtgttgatctgggcttatggagacaacgaagtaaattggactgctgctctt
aaaattgcaagatctcggtgcaatataaactcagagtatcttcgactattgtcaccctta
cccacagctgggaatctccaacatagactggatgacggcataactcagatgacattcacc
cctgcatctctctacagggtgtcaccttacattcacatatccaatgattctcaaaggcta
ttcactgaagaaggagtcaaggaggggaatgtggtttatcagcaaatcatgctcttgggt
ttatctctaattgagtcactcttcccaatgacgacaaccaggacatacgatgagatcaca
ttgcacctccacagtaaatttagctgctgtatcagagaagcacctgttgcagttcctttc
gagctacttggggtggcaccagaactaaggccagtgacctcaaataagtttatgtatgat
cctagtcctgtatcggagggtgactttgcgagacttgacttagctatcttcaagagttat
gaacttaatttagagtcataccccacaatagagctaatgaacattctttcaatatccagc
gggaagttgattggccagtctgtggtttcttatgatgaagatacctccataaagaatgac
gccataatagtgtatgacaacacccggaattggatcagcgaggctcagaattcagatgtg
gtccgcctattcgagtatgcagcacttgaagtgctcctcgactgttcttatcagctctac
tatctgagagtaagaggcctagacaatatcgtgttgtatatgagtgatttatacaagaat
atgccaggaattctactttccaacattgcagctacaatatctcatcccatcattcattca
agattacatgcagtaggcctggtcaatcataacgggtcacaccaacttgcagacacagat
ttcatcgaaatgtctgcaaaactgttagtctcttgcactcgacgcgtggtctcaggttta
tatgcagggaataagtatgatctgctgttcccatctgtcttagatgataacctgagtgag
aagatgcttcagctgatatctcggttatgctgcctgtacacggtgctctttgctacaaca
agagagatcccgaaaataagaggcttatctgcggaagagaagtgttcagtacttactgag
tacctactgtcagatgctgtgaaaccattacttagttctgagcaagtgagctctatcatg
tctcctaacatagttacgttcccagctaatctatactacatgtctcggaagagccttaat
ttgatcagggaaagagaggacagggacactatcttggcactgttgttcccccaagagcca
ctactcgagttccccttggtacaagatattggcgctcgagtgaaagatccatttacccga
caacctgcggcgtttttacaagagttagatttgagcgctccagcaaggtatgacgcattt
acacttagtcaggttcattctgaacacatatcaccaagtccggaggaagactacttagta
cgatacctattcagaggaataggaactgcatcctcctcttggtataaggcatcccacctt
ctttctgtacccgaggtcagatgtgcaaggcacgggaattccttatacttggcagaagga
agcggagccatcatgagtcttctcgaactgcatgtaccgcatgaaactatctattacaat
acgctcttctcaaatgagatgaaccccccacagcgacatttcggaccgaccccaacacag
tttctgaattcggttgtttataggaatctacaagcggaggtaccatgtaaagatggattt
gtccaggagttccgtccattatggagagagaatacagaagaaagcgacctgacctcagat
aaagcagtggggtatatcacatctgcagtgccctaccggtctgtatcattgctgcattgt
gacatcgagattcctccaggatccaatcaaagcttactagatcaactggctaccaatctg
tctctgattgccatgcattctgtaagggagggcggggtcgtgatcatcaaagtgttgtat
gcaatgggatattacttccatctactcatgaacttgttcactccgtgttccacaaaagga
tatattctctctaatggctatgcatgtagaggggatatggagtgttacctggtatttgtc
atgggttatctaggtgggcctacatttgtacacgaggtagtgaggatggcaaaaactcta
gtgcagaggcacggcacacttttgtctaagtcagatgagatcacactgactaggttattt
acctcacagcggcagcgtgtaacagacatcctatccagtcctttaccgagactaatgaag
ttcttgagaaagaatatcgatactgcgctgattgaagccggaggacagcccgtccgtcca
ttctgtgcagagagcttggtgagcacattagcggacataactcagatgactcagatcatc
gctagtcacattgacacagtcattcgatctgtgatctacatggaggctgagggtgatctc
gctgacacagtattcttatttaccccttacaatctctctacagacggtaaaaagaggaca
tcacttaaacagtgcacaaggcagatcttagaggtcacaatactgggtcttagagttgaa
aacctcaataaagtaggtgatgtaatcagcctagtgcttaaaggtatgatttctctagag
gaccttatcccactaagaacgtacttgaagcgtagtacctgccctaagtacttgaaggct
gtcctaggtattactaaactcaaagaaatgtttacagacacatctttattatacttgact
cgtgctcaacaaaaattctacatgaaaactataggcaatgcagtcaagggatactacagt
aactgtgactcttag
DBGET
integrated database retrieval system
