Viruses: 80535034
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Entry
80535034 CDS
T40000
Symbol
L, QKL35_gp7
Name
(RefSeq) Potato yellow dwarf virus; RNA-dependent RNA polymerase
KO
K26704
Rhabdoviridae RNA-directed RNA polymerase
Virus
195060
Potato yellow dwarf virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Mononeg_RNA_pol
Mononeg_mRNAcap
Motif
Other DBs
NCBI-GeneID:
80535034
NCBI-ProteinID:
YP_010797298
RS:
NC_076163
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Position
NC_076163:6847..12681
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AA seq
1944 aa
AA seq
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MTDWEERDREYDMEDETWGDNRKEDMHESGDYHLQSALKPVEDYRKNFIFRNEESKLRAT
VGDPGSLLDNITTLAFWWRLALITTKLNENYIVSDLILHGLLKLDYSMIGDLVKSEMRVA
YRGDILSDINMSTHVANHLRQLVAAYPNLITVTRLMCFVLLMKNNLKTMRSKGTSVFPNL
DHMTLQGGNIVVQVEPSFILIFNTDLLHLNVGGRRYWCPMQYFINASDKVQERHNIMVYT
AVCHPIMPTLSPSTQLVMRVLEVFDRLLQHLGNDGYSDVSTFEAMIVGIIIDRDEPDLVL
EPGEFSRSILDDTSAQGRPYVEEMKSLLMDLSVDQLADLHGLYRIWGHPVIDIDGGLAKM
RNVSLKQKITDASLGRTVGQKFKEMFFKNYRSKHGFYPPHSLPGDQTESDEEDDEMGISS
TYLTTCLATGKPFSTSNIGYSLEDWDLVTIKKTFEIPYSWNIVHTIKDKAISPNRSELYH
NLVAKGHVFNQNMRRVILKTIATPMKPMREFLGSVAAVGLALIFLIIGLYPKERELKVLP
RFFSLMSHELRLYFTATEQLLNDKILKYFPEITMSLNLLDMQKKMGKMSGKQKDNSTTVT
YVVNMDFVKWNQQMRKEICTHVFRPLGELFGLPRLFERTHELLEQCVIYLSSGERDLIPD
PETGIVIDRIYSWCRDGSGKEGLRQKGWTIMTDCDIKLIADRLGLNASLVGGGDNQVLTV
TLTTADIDENGNISAEGKRKIKEKMRTFMEELQRHFDRRGLPLKTSETWTSTSLFMYNKH
MYHNGRPLRTVLKQVSRCFPFSNSSIMSTALMCNSVSTTLKATMQKEHYLMGVLTLKTLW
GLYISELAVNMNPLFYSTRGCILSGKYVITRDGREEESSVTERNRETFWAKILYLPSVMG
GPGIVNCFNLTQRGFPDPVTEGFLFLQRLYSEVHMINPRLGAAIHTLLGMSFKKEPNFEK
LVEDPASLSHDAPSHSTAVMREKARSAVMDMAAGVNKEFVDLMKVADKNKELEFYKSLCS
GEELDPKVLHEIAKASMYGVTNSLLSRVDKTRTIKRMNETVSVVSDMAKAEENYIGYLLV
RDNRPHDLILQGCTRILGDTARFRSYGKRVLGATVPHPSEYLALYPANHPDCLSGSITVR
MQPATREDRTENTGPCKPYYGSYTKERFRATEIASAYGDEDVLKKVTNIQKLVGWRYSAE
SKFGELITAVFRAVTNIDPAHLRVREEVIRGSYDHRRNTDSNTHGGIPNFLNTLSTYLSI
CTSTWVEHSRSGKNEYIHFQACMISCILQAMPHLTARDQVPRITEYHAHEVCQTCITEIE
NINPDRTAPRQSVLFPTLIDNTLVYMDAEDVRIDYHKKVLIEETNTIAPLLLSSEEMDNQ
NDMLEDCVSTMLILEAYGIKHHTSKSYMLLARERMDLELCLRRFREKSVSLRTLLPFITT
VVPSSLNTLCDTPAGYAEKFRSLGWTTEGSLEGQTTSVQTDHWERDVPVSYISLINSTLG
GVPLQTAAHIIGRFPLILSCLDCLSVLRQATGKTASHALQVSLCQYHSHLSKKLPVTNIH
PDNLLKKRAVFEEPVPYLLAEGTTDLMHTVPTYDSDLLDLPQQTRLQEIGESLHNNLWAN
LLQNFISNVWVDYVVIDNTLEALEIVFNALKMREGFEKPLYIYVDELSREETGIIYEKFR
RSRLRGCEVHIVYSSEDLPDGERIIVSLTEQWKADMCRVREAYVLYGGSQLYRMEQDTKR
RIQGVYSDPSLIHSSFLSVVCLGRSQANVLNLSSIAAVMDLTGGYDTDRYGGRGGRSLFT
TLSGIRGLVTRYKFRTRYEMIRLFQDGLERVERIDTFYRGRLRSPRIQMELTLLYVSAAA
HCREDLIDRVKCIKRMNLDSIAGTIYPAFRRAPVESMASRFYIGMRDYLSGRDSITFERR
KILQGINYKSQKRAGVNLVAGADE
NT seq
5835 nt
NT seq
+upstream
nt +downstream
nt
atgaccgattgggaagaacgcgaccgagagtatgacatggaggatgaaacttggggagac
aaccgcaaagaggacatgcatgaaagtggggactatcatttacaatccgctctgaaaccg
gtagaggactatagaaagaattttattttccggaacgaagagtcaaagttgcgtgcaaca
gttggcgatccggggtctttgttagataatatcaccactttggccttctggtggagacta
gcccttattacaacaaagttgaatgagaactatattgtttccgatctcatattacatggg
ttactcaagctagactatagcatgatcggagatttggtcaaatcggaaatgagggtggct
tacagaggagacatactgtcagatatcaatatgtccactcatgtggccaaccaccttcga
cagttggttgccgcttaccctaatctgatcactgtaaccaggttgatgtgttttgtcctc
ctcatgaaaaacaatctgaagacgatgagatctaaggggacatcagtatttcccaattta
gatcacatgacccttcagggagggaacatagtggttcaggtcgagccgagcttcatattg
atcttcaatactgatcttctgcatctaaatgtaggagggcggagatactggtgtccgatg
cagtatttcattaatgcctcagataaagtacaagaaagacacaacatcatggtgtataca
gctgtatgtcaccctatcatgcccaccttgtccccttctacccagctggtgatgagggta
ttagaggtctttgatagattgttacagcatctgggaaacgacggttattctgatgtgtcc
accttcgaggcaatgatagtgggtatcatcatagacagggatgaacctgatctggtgctg
gagccgggtgagttttccagaagtatcttagatgatacatctgctcaggggaggccttat
gttgaagaaatgaagtcattgcttatggacctgtcagtagatcaactcgcagatctccac
ggtctctataggatctggggtcaccctgttatagatatcgatggaggcctagccaagatg
cgtaacgtgtctctgaaacagaagataaccgatgcaagcttggggagaacagttggacag
aagttcaaggagatgttttttaagaactacaggtctaaacacggtttttatcctccacac
tcattgccaggagatcaaacagagagtgatgaggaagatgatgagatgggcatctcctct
acatacctaaccacctgcttggctaccgggaagcccttctcaacatcaaacatcggttac
tcattggaggattgggaccttgtaacgattaagaaaaccttcgagatcccttactcctgg
aatatagtgcacaccataaaggacaaggcaatctcccccaacaggagtgaactgtatcac
aatcttgttgcaaaggggcacgtattcaaccagaacatgaggagagtcatccttaagacc
atagccactccgatgaagcctatgcgagagttcttggggtcggttgcagcggtgggcttg
gcactaatattcctaatcattggtctttaccccaaggagagagaattaaaagtgctgccc
aggttcttctcattaatgtctcatgagctgagactctacttcacagccaccgagcagctt
ttgaatgacaaaatattgaagtatttccccgagataaccatgtccctgaatcttctcgat
atgcagaagaaaatggggaagatgtcaggcaaacagaaagacaattccactactgtaact
tatgttgttaacatggattttgtgaagtggaatcaacagatgaggaaagagatatgcact
catgtgtttagaccccttggtgagcttttcggcctacccagactattcgagcgcacccat
gaattgttagaacagtgtgtcatatatctctcttcaggagagagggacttgattccggac
cctgagacaggcattgtgatagatcggatatattcctggtgcagggacggatcaggtaaa
gagggactgaggcagaaagggtggaccatcatgacggactgtgacatcaaattgattgct
gatagattagggttgaatgcatcgttggttgggggaggagacaatcaggtgctgacagtc
actctcactacggcagacatcgatgaaaacggaaacatcagtgcagagggaaagagaaag
attaaggagaaaatgagaacattcatggaggaactccagcggcactttgatagaagagga
ttgcccctgaaaacgagtgaaacatggaccagtacttctctttttatgtacaacaaacac
atgtatcataatggcagaccactgaggactgtgttgaagcaggtgagcaggtgctttcct
ttctctaactcctctattatgtccacagctcttatgtgcaatagtgtcagcacaacactg
aaggccaccatgcagaaggagcattatctgatgggtgtattgacattgaagaccctttgg
ggtctctatatctcagagctggctgtaaacatgaaccctctcttttatagtaccaggggt
tgcatactctcggggaaatatgttatcaccagggacggaagagaagaggagagtagtgtg
acagaaaggaatcgcgagacgttttgggcaaagatactgtacttaccctctgtgatgggg
ggcccaggtatagtaaattgtttcaatctgactcagaggggcttccctgatccggtaacc
gaggggttcttatttcttcaaaggttgtatagtgaggtacatatgatcaatcctcgcctt
ggggctgccatacacacgctcttgggcatgtcattcaagaaggagcccaactttgagaag
ttggtggaagacccagcttctctgtcccacgatgccccttctcatagtacggcggttatg
agagaaaaagcaagatcagcggtcatggatatggctgccggcgtgaacaaggaatttgtg
gacttgatgaaggtagcagacaagaacaaagagttagaattctacaaaagcttgtgctca
ggagaggagctggatcccaaagtgcttcatgagatagctaaagcttccatgtatggtgtc
accaacagccttttgtcgagggtagacaagacgaggacgataaagaggatgaatgagaca
gttagtgtagtctctgatatggccaaggctgaggagaactacatcgggtatctgcttgtg
agggacaacagaccccatgatctgatactacagggatgcactcgtatcttaggggataca
gcgcggttcagatcctatggaaagagagttctgggtgccacagttccccacccctcagag
tatttggccctctaccccgccaatcatcccgactgtttaagcggatccattacagttaga
atgcagcccgcgaccagagaagacaggaccgagaacacaggtccctgcaaaccatattat
gggtcctacactaaagagagattcagggctaccgagattgcatctgcctatggggatgaa
gatgtgttgaagaaggtcaccaatatacagaagctggtagggtggaggtattctgcagag
tcgaagttcggagaactcatcactgctgtcttcagggcggtgaccaacatagatcctgct
cacctgagggtcagagaggaagtgataagagggagctacgatcatcgtaggaacaccgac
agcaacactcatgggggaattcccaattttttgaatactctcagcacttatctaagcata
tgcacgtcgacatgggtagaacactctagatcagggaaaaatgagtatatacactttcag
gcctgcatgatctcgtgcattcttcaagccatgccccacttgaccgcaagagatcaagta
ccgaggataaccgagtaccatgcacatgaagtatgccagacctgtataacggagattgag
aatataaaccctgatagaactgctcccagacagtcagtactgttcccaacactgatcgac
aacactttagtgtatatggatgcagaagatgtcaggatagattatcataagaaggtgctg
atagaggagaccaacaccatcgcacccttactcttgtcatcggaggagatggataatcag
aatgatatgctggaggattgtgtgagcactatgctcatcctggaggcatacggaattaag
catcatacatcgaagagttacatgctgttggcccgagaaaggatggatttggagttgtgc
ttgagaagattcagagagaagtctgtgtctctgagaacgctgctgccttttatcaccaca
gtagtacctagctcgctgaatacgctgtgtgatactcctgcaggctatgcagagaagttt
cggtcactgggatggactactgaaggttccctagaaggtcaaacaacatctgtccagaca
gatcattgggagagagatgtacctgtgagttatatatctctgataaatagcactctggga
ggggttccattgcaaacagctgcacacatcataggcaggttccctctgatattgtcctgt
ttagactgcctcagtgttctccgacaagccaccgggaagactgccagccatgctctacaa
gtgagtctctgtcaataccacagtcacctctccaaaaagctaccagtaaccaacatccac
ccggacaacctgctgaagaaacgagcagtctttgaggagcctgtaccatatctcctagct
gaagggactacagatcttatgcacactgttcccacatatgattctgatctcctagatctc
ccgcagcaaacaagactgcaagagatcggagagagtctgcacaacaacttatgggctaat
ctgttacagaacttcatatccaatgtatgggtggactatgttgtaattgacaacacatta
gaagctctggagattgtattcaatgcattgaagatgagggagggctttgagaaaccccta
tacatctatgttgatgagctatctagagaggaaacgggtataatttatgagaagttccgc
cgatccagactacgaggatgtgaggtgcatattgtgtattcgtcagaagatctaccggac
ggagaaagaataattgtctctctgacggagcagtggaaggctgacatgtgcagggtgagg
gaggcatatgtactatacggggggtcgcagctgtaccgcatggagcaggacacaaaaaga
aggatacaaggggtctactctgatcccagtctaatccactcatccttcttgtccgtagta
tgtctcggcagatcccaggccaatgtgttgaatctgtcttcaatagctgcagtaatggat
ttgaccggcgggtacgacacagatcgctatggaggaaggggaggaagatcactctttaca
acgctgtcagggataagaggactggtgacaaggtacaagttcagaactcgatatgagatg
atcagactttttcaagacgggttggagagagtggagaggatagacacattttacagagga
agattgagatcacccagaatccaaatggaactaacactgttgtacgtctccgccgctgca
cactgccgggaagatctaattgaccgggtgaagtgtatcaaaagaatgaatctcgactct
atagcagggacaatctatcctgcttttaggagagccccagtggagagcatggcaagccga
ttctacatcggtatgagggactatctatcggggagggacagtatcactttcgagagacgc
aagatcctacaaggcatcaactacaagtcgcagaagagagcaggagtcaatctggtggca
ggtgcagatgaatga
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integrated database retrieval system
