Viruses: 80536889
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Entry
80536889 CDS
T40000
Symbol
UL52, QKO82_gp04
Name
(RefSeq) Caprine alphaherpesvirus 1; DNA primase
Virus
39944
Caprine alphaherpesvirus 1
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Herpes_UL52
Motif
Other DBs
NCBI-GeneID:
80536889
NCBI-ProteinID:
YP_010798640
RS:
NC_076509
UniProt:
A0AAF1D1Y7
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Position
NC_076509:complement(3336..6458)
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AA seq
1040 aa
AA seq
DB search
MDGPAALEDAIRVLYATDGCAISFSLMLLTGQEELGRGAYVVAYDWPARLAACFGEERDD
VADALAAARPLVAFYLLGGPPGGSGAAKPRAWPVFACTFNTERGARALAGALLLGAPIPA
GVLLEHLAEDVTFALHADMIAALLVATEQLAPRAGRSANDALYVEGQATVRTAARARGSG
RGGLASLYIHHEHKTVAAYRRLYYNYGATPFWFLSKFGPDEKMLVLATRFYVFQAERTRE
AAAYDLQAVRDCLGTYAVAAPPNPSGLAFPDLVSFAALSAFCCQSAYARGAAAAAAPAYV
AARIEADLAEVRCLREYIDHDRHSLKVADREFVAYVYLAYFEGFNWRQIDEHLRAVTIAD
AGALPRVAGSSRLRERAVEAFFRHVRAQFNVQSYIEQNVALAVTRLPVTTANAYVRARTY
ARLAAGGERGRVVCDGAAALRVALDRLERHAARFGWTLHADERAPEAADAAPDGAPEPLA
CCGVSKRLLTLATCAPREGAHLLDGLFGARGTATPAPVYRVELPRGQQAFAVADGDDWAR
ITRSAALAPDEVAAAAASGDGALAERDARLTALASAGASGAGGAGGLGPAGPREYFYENR
NELFNARLAVTNIILDVDFRLRQAIPRADLHRAMRGFRRGTVTALAALLPEAAVDAWDAH
PCFFYKSACPPAAADGGASPLWGAPDGGDACWDEYERALSQEQETWYDCEDFGGGAEGGG
AAAGADDRGGGAGPAPAGTCGCATKMGFRVAVPVPAPYVFAGAQTMKGVARLIQHAVMLE
RTFTEAMSGYLRDFAFVDAGVYTHGHSLRLPFFGKPAAAGAAERQLRPFYVVPERCADVL
AFVAAHRDPRNFHFHAAPAPPEPPRTHVLRSVGGEYVSFFERKAAVNRAAFHGARVSLQR
ALAAFGVDAAERGAVEEFVAGAMESELAPYVEAHYPRAAHEYQGAAARLAVAKADWLLAQ
LVPARARAAAPQGFSCLRAVHGRGAQNKARTLVSLSVDAHSRLCASLIQQCFATKCGSNR
LSTVFTVSIAPPHAAGGADR
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggacggcccggcggccctcgaggacgcgatccgggtcctctacgccaccgacggctgc
gcgatcagcttttcgctgatgctgctcacgggccaggaggagctcgggcgcggcgcctac
gtggttgcgtacgactggcccgcgcggctcgcggcgtgcttcggcgaggagcgagacgac
gtggcggacgcgctggcggcggcgcgcccgctcgtcgcgttttatctgctgggggggccg
cccggcggaagcggcgcagccaagccccgcgcgtggcccgtgtttgcgtgcaccttcaac
accgagcgcggcgcgcgcgcgctggcgggcgcgctgctgctcggcgcgcccattcccgcc
ggcgtgctgctggagcacctggcggaagacgttaccttcgccctccacgccgacatgatc
gcggcgctgctcgtggccacggagcagctggcgccgcgcgcggggcgcagcgccaacgac
gccctctacgtagaaggccaggcgaccgtgcggacagccgcgcgcgcgcgcgggtctggc
cgcggcggcctggcctcgctgtacattcaccacgagcacaagacggtggccgcgtaccgg
cggctctactacaactacggcgcgacgccgttttggtttctgtccaagtttggccccgac
gagaaaatgctagtgctggctacgcgcttttacgtgtttcaggccgagcgcacccgcgag
gccgcggcgtacgacctgcaggccgtgcgggactgtctgggcacctacgccgtcgccgcg
ccccccaacccgtcggggctcgcgttcccggacctagtgtccttcgcggcgctgtctgcc
ttctgctgccagagcgcatacgcccgcggcgcggcggccgcggccgcgcccgcgtacgtg
gccgcgcgcatcgaggccgacctcgccgaggtgcgctgcctgcgcgagtacatcgaccac
gaccgccacagcctcaaggtggcagaccgggagtttgtggcgtacgtctacctcgcctac
tttgagggcttcaactggaggcagattgacgagcacctgcgcgcggtcacgatcgcagac
gccggggcgctgccgcgcgtggcgggctcctcgcgccttcgcgagcgggccgtcgaggcc
ttctttcggcacgtgcgcgcgcagttcaacgtccagagctacatcgagcagaacgttgcg
ctggcggtgacccggctgccggtcactaccgcaaacgcctacgtgcgggcgcgcacgtac
gcgcgcctggcggcgggcggcgagcgggggcgcgtggtctgcgacggcgcggccgcgctg
cgggtggcgctggaccgcctagagcgccacgccgcccgctttgggtggacgctgcacgcg
gacgagcgggcgccggaggcggcagacgccgctccagacggagccccggagcccctggcg
tgctgcggggtttctaagcggctgctcacgttagcgacctgcgcgccgcgtgagggcgcg
catctgctggatgggctatttggggcgcgcggaacggcgacgccggcgcccgtgtaccgg
gtggagttgccgcgcgggcagcaggcgtttgcggtggccgacggagacgactgggctcgg
atcacgcgcagcgccgccctcgccccggacgaagtggcggcggccgcggcgagcggcgac
ggcgcgctcgcggagcgcgacgcccggctgacggctctcgccagcgcgggcgccagcggc
gccggcggcgccggcggcctgggtcccgccggcccacgcgagtacttttacgaaaaccgc
aacgagctgtttaacgcccgcctcgccgtcaccaacatcatcttagatgtcgacttccgc
ctcagacaagcgatccccagggcagacctccaccgggccatgcgcgggtttcgccggggc
acggtcacggcgcttgcggcgctgctcccagaagcagccgtggacgcgtgggacgcgcac
ccctgcttcttctacaagagcgcctgcccccccgcggccgcggacggcggcgcgtcgccg
ctgtggggcgcgcccgacggcggcgacgcgtgctgggacgagtacgagagagcgctttct
caagagcaggagacgtggtacgactgcgaagactttggcggcggggcagagggcgggggc
gccgccgcgggcgccgacgaccgcggcggcggcgcggggcccgcgccggcgggcacttgc
ggctgcgcgacaaaaatgggcttccgcgttgccgtgcccgtccccgcgccgtacgtcttc
gccggggcgcagaccatgaagggcgtcgcgcgcctcatccaacacgccgtcatgctagag
cgcacctttacagaggccatgagcgggtacctgcgggactttgcgttcgtcgacgcgggg
gtgtatacgcacggacacagcctgcggctgcccttttttggcaagccggcggcggcgggg
gcggcggagcgccagctgcggccgttttacgtggttcccgagcggtgcgcagacgtactc
gcctttgtcgccgcgcaccgagacccccgcaacttccacttccacgccgccccggcgccg
ccggagccgcccaggacgcacgtgctgcgcagcgtcggcggagagtacgtcagcttcttt
gagcgcaaggcggccgtgaaccgcgccgcgttccacggcgcgcgcgtgtctctgcagcgg
gcgctcgccgcgtttggcgtcgacgcggcagagcgcggcgccgtcgaagagttcgttgcc
ggcgccatggagagcgagctggcgccgtacgtggaagcgcactacccgcgggcggcgcac
gagtaccagggcgccgcggcccgtttggcggtggccaaggccgactggctgctggcgcag
ctcgtgcccgcccgcgcgagggcggccgccccgcaagggtttagctgcctgcgcgcggtc
cacgggcgcggggcccaaaacaaggcccggacgctggtgtccctcagtgtggacgcgcac
agccgcctgtgcgcgtcgctcatccagcagtgcttcgcaactaagtgcggcagcaaccgc
ctgagcaccgtcttcaccgtcagcatcgcgccgccgcatgctgctgggggggcggaccgc
taa
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