Viruses: 80541386
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Entry
80541386 CDS
T40000
Symbol
QKU09_gp39
Name
(RefSeq) Psittacid alphaherpesvirus 5; major capsid protein
KO
K26014
Herpesviridae major capsid protein
Virus
2972693
Psittacid alphaherpesvirus 5
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Herpes_MCP
Motif
Other DBs
NCBI-GeneID:
80541386
NCBI-ProteinID:
YP_010802613
RS:
NC_077028
UniProt:
A0A5P9JQA9
LinkDB
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Position
NC_077028:66184..70392
Genome browser
AA seq
1402 aa
AA seq
DB search
MLREEPFRAVISAPFVKAGELLGALRESCHATFYNWITKEVSDNDESYRHQFDVLLGSYV
NTVTLTRFLETSLSVACICVRFPELRYADVGVIQFVTTNPMMATSDTEIPARPTHTYITK
RWNKSNLTASLNISATARGLISGETLDGTELSDFARVRAINQLARNVKTTLDSFERGTIH
HVITILIAKSPPSPLLCPLADFFLTNRHLTRVVQGALLSAMKRSVIRDLFFLDKQRFRGS
KADLINKIGEMIRCTMPSVADVRISHRTVDGKPIEGILLTTSPVRDVILSVLGSAGAEAV
VPAAYSEMVISGPNLVTALLTGRAVRNFEEAATRLLDFKEGDFLTDENIPSSNNDGPAEM
VVPAQLIDIGGDIVFLESLEKIYNRTRVSYPLVRPVDLTFGFPLGLWKPISERYSASVSD
LSPPQNTFNVREHPPREMWFFNKEGNMISVKFEDALSTIAHPIAHGITDILNDLLQVPWL
QAREPAPLGFTVHRFQTALPRVLMIRFLEALLAYPQPYSEALLINTKTPEQFYQHTNPFL
TLEIHPFFDVFRSIRDIPIPHDDPLFLPNEPVTLDASPRIINGNIPLPLCSADFRTHRGF
QISQGRYRLSPQTILSIETTFNDANYPLALYIIEAAIHGSEPIFMESQRFVAQCVNSYWH
STRGIAFLTSFPMIMYIYHNLGGLIEHDCHMIYADICMQLQALRSVITQFTQPGMRLLGH
SVEDLNNILADVAVFPPMIYDCDPILRARAVRVTRRVEIFTFGEREVNILLRDPVAPIEF
NVASPNLYHGQQYTQNARIESGEHHDGEWTVLSKIFYYALLPAMARGRCCSMGVEYEMIY
ALLNTTRLPTTPEELSDGSRLTDAHHPLHPNNLLPETFNTLLSNGRLRSIDNEGLIAFIN
STQRRQAHGTVPLRVQYLPDPAFMNLNFPRTVLMDGVLYNGIIMINYNTYDATANPNNYF
YALPVHNFFSRRSIVDACFRTNVNMGQLSEDLPLVPTFLGAEMYRTIRLPSCLYAANAGR
EVSIPTLAYSLVASYFKLSPVSLLNQIRSGLHPGFALTCVRQDRFLADHIMFTRRASESY
YFGVPTMTHRKEAGGIAIDTSQPRAHIDMGLGFSSTRLPATLNCTLTDMGARCQNLFNAR
FPGQFTHAEIADYVNEQLIANDKTVLDMNNATILTYDRPPLPPGVGLGQLSSLEFIITPV
TADLKYFLTPFSPRGRGNLAVLEQDCCNEEQKLNELSDRVMYDHSVADSANPSRATVNPW
ASQKFSLGDRLYNAERGFIVSTEYYSPCAKFFSPNRIVERGKCLLKIIRDAASTLETTTG
DTEYQFIAPPGSDELITDPCALLQEVYPILCASDPALFASFDVKNATRRSMTRENHYAQY
LIYDNSPIAGAVLKDVSLSTTM
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgcgaggaaccattccgagcggtaatttctgcaccttttgttaaggcgggagaa
cttctcggcgcgcttcgcgaaagttgtcatgcgactttttacaactggattaccaaagaa
gtatcggataacgatgaaagctacaggcatcagtttgacgtgcttttgggatcatatgta
aatacggtaacgttgacacgttttttagaaactagtttatccgtcgcatgtatctgtgtt
cgttttcccgaactccgttatgctgacgtcggcgttattcaattcgttacaactaacccc
atgatggctactagcgatacggaaattcctgcacgtcctacacatacgtacattacgaaa
agatggaataaaagcaacttgacggcaagtctgaatataagcgcgacggcaagaggactc
attagtggtgaaacattagatgggactgagctttccgatttcgctcgtgtacgcgcaata
aatcaattagctcggaatgtcaagacaacactggattcgttcgaacgaggaactattcat
catgtaattacaattttaatagccaaatcgcctccaagtcctctattatgtcctctagct
gatttctttctgacaaatcgacacttgactcgagtggtacaaggcgcgcttttatcggcc
atgaaacgctccgttatacgggatctctttttcctcgataaacaacgattcagaggctct
aaagcagatctgatcaataagatcggtgaaatgatacgatgtactatgcctagcgtagca
gatgtacgtatttcacacaggaccgtcgatggcaaacccatagaggggatcttgcttaca
acctctcccgtaagagatgtcattttgagtgttttgggaagtgcgggagccgaggccgtt
gttccggctgcgtatagcgaaatggtgatcagtggaccaaatctagttacggctctgtta
actgggcgtgcggttcgtaatttcgaagaagccgctacgcggctactcgactttaaagaa
ggcgactttttgacggatgaaaatattccgtcttccaataatgacggaccggcagaaatg
gttgtgccggcacaattgatcgatataggaggggatatagtatttttagaatctttagag
aaaatttacaaccgcactagagtgtcttacccgttagtaagacccgtagatttaacgttt
ggatttcctttgggactctggaaaccaatctccgaacgatattccgcatctgtctccgat
ttaagtcctccccagaatacctttaacgtacgagaacatccacccagagaaatgtggttt
tttaacaaagagggtaacatgatatctgttaaatttgaagatgcactatcgacgatcgca
catcccatcgctcatggtataacggatatattaaacgatctattacaagtcccatggtta
caggcgcgggaaccggctccactgggatttaccgttcatagatttcaaacagctctacca
cgtgtactaatgatacgttttctcgaggcattactagcgtacccacagccgtattctgag
gcattactgattaatacaaaaactccggaacaattctatcagcatacgaatccctttttg
acgctggagatacatcccttttttgatgtatttcgaagcattcgagacatacccatccct
catgatgaccccttatttctcccaaacgaaccggttacgttagatgcaagtccacgtata
attaatggaaacataccattgccgttatgttctgccgatttcagaacacaccgggggttt
caaatttcccaaggacgctatcgattatcaccgcaaaccattttatctatagaaactaca
tttaacgacgctaattaccccttagcgctttatataatcgaggcggctattcatgggagc
gaaccgatatttatggaatcgcaacgttttgtcgcccagtgcgtgaacagctattggcat
agtacgcgcggaattgcatttctgaccagctttccgatgatcatgtatatttaccacaat
ctaggcggccttatcgaacatgattgtcacatgatctacgctgacatctgtatgcagtta
caagctttacggtctgtcataacgcagtttactcaacctggaatgcgtttattgggacat
tcggtggaggatttaaataatattctcgcagacgttgcagtgttcccccccatgatttac
gattgcgatcctattttgcgggcacgagccgtgcgagtaactcgtcgcgtcgagatattc
acttttggagaacgcgaggtaaacatcttactcagagaccctgtggcacctatcgaattc
aacgtcgcttcacccaatctatatcatggtcaacaatacactcaaaacgcccgtattgaa
agtggtgaacatcacgatggagaatggacggtgttatctaaaattttttattacgctctt
ttacccgctatggcccgcgggcgatgttgtagtatgggtgtagaatatgaaatgatttat
gccttattaaatacaacccgattgccaacgacacctgaagagctaagcgacggaagtcgt
ttaacggacgcacatcaccccttacatccaaataacctcttgccagagaccttcaataca
ttgttgtctaacggaaggttacggtcgatagataacgagggactgatcgcgttcataaat
tccacgcaacgacgacaagctcacggcactgtgccgttgcgagttcaatatttacccgat
cccgcgttcatgaatttaaatttccccagaacagtgttgatggacggagttctttataat
ggtattatcatgatcaattacaatacatatgacgcaactgcaaatccgaataattacttc
tacgcactacccgttcataattttttttctcgacgcagcattgtcgacgcatgttttcgg
actaatgtaaatatgggtcagttgtcagaagatttaccgttagtgccaacatttttggga
gcagaaatgtatcgtaccatacgccttccgtcctgtctatatgcagcgaacgcggggcgg
gaggtctctattccaaccctggcatacagtttagtagcgagctattttaagctttcgccg
gtgtcgctacttaatcaaattcgttcgggtctacatcccggatttgccttaacctgtgtt
cgtcaggatcgttttctcgccgaccatattatgtttacgagacgcgcatcagagtcttat
tacttcggcgtaccaacaatgacacatcgaaaagaggctggaggaatagcgatcgatacc
agtcaaccgagggcacacatagacatgggtctaggttttagcagcacacgcttgcctgct
actctgaactgtacactcacggatatgggggcgcgttgtcagaacctttttaacgcgcgc
tttccgggtcagtttacacatgcagaaatcgcggattatgtcaatgaacaactcatcgct
aacgataaaactgtcctcgatatgaataatgctacgatactgacatacgatagaccccca
ttacctcctggtgtaggactgggacaattatcgtcactcgagttcataattacacctgtt
acggcagatcttaaatatttcctaaccccattttctccgcgaggacgcggaaatcttgca
gtgttagagcaagactgttgcaacgaagagcaaaaattgaacgaattatcggatcgtgtc
atgtacgaccactctgtagccgattcggcaaatccttctagggctacagtaaacccgtgg
gcctcacagaaattttctctgggtgatagactttataatgcagaacgcggttttatagta
tcgactgagtactacagtccatgtgcgaaatttttttctccgaatcgtatagtcgaacgt
ggtaaatgcttactgaaaataattcgtgatgctgcatctacactggaaacgactacggga
gatactgaatatcagtttatcgccccgccgggttcggatgagttaatcaccgatccctgt
gcattgctccaagaagtttatcctattttgtgtgccagcgacccggcattatttgcatcc
ttcgatgttaaaaacgcgactagacgaagtatgacgcgagaaaatcactatgcgcaatat
ctcatttacgataattctccgattgccggagcggttttgaaagatgtcagtttgtccaca
accatgtaa
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