Viruses: 80549633 Help Entry 80549633          CDS       T40000                                  Symbol QK586_sMgp1 Name (RefSeq) Rio Claro virus; glycoprotein   KO K24859   Phenuiviridae envelopment polyprotein Virus 2848418  Rio Claro virus Taxonomy SSDB OrthologParalogGFITVOGVOG cluster Motif Pfam:  Phlebovirus_G1 Phlebo_G2_C Phlebovirus_G2 Phlebovirus_NSM Mis12 Golgin_A5 PUMA_CC Motif Other DBs NCBI-GeneID:  80549633 NCBI-ProteinID:  YP_010839702 RS:  NC_078054 UniProt:  I1T369 LinkDB All DBs Position NC_078054:34..4053 Genome browser AA seq 1339 aa AA seqDB search MIYLPILLLLRLTAASFVLESTRPKGHSSKVCLSNTSSSKILERYWDNLEQGMPNGPRMC SIGSGESHLTSGANIKKLIRDVRDSPTALNVSCVVANQPEHSISIAFLEIPDDFIKPTSI DCVTGESIREVGTLDEAASPPDFHKPVIIEMDEDTDFLPPRVLPASNDIRPVTLDTRHGH ITRDEEKIALQLEVDTLRDQLGVERRQIAELNSIMQNTANMADSEREQNQKTISEKHRQI HDQTRQIHELEREIMRLSRPTTLPLLKTTLAVMTAVSLLPASDAVLWPHTRNRIGSGLYK MSDDDSVDCRPVNYLEGCYGFELLLDSSQYPFFSSHSTFRSLLEAVNDNIVNKNNEGICL SNSSQKDPKCHSDKALMQAYCPNNFRSAHYIDDNGQLRGVVCKEGYEITEDCNFCRKIKK SANQNKDVYKSSVQMQDIVCQPGGEAYDGPKIRPKGACFIGNRVFKKCKLMSKSYEVVPF VTVPSKGKIYLDTMILKNEEVISEDSFVCYDHRGQEGGSVATEQESRGLNAVRVSECKIV NSAKTKKCSGDAVFCSKYKCANEYPEVYCRHVPGAGNLKVLMSGQWIKPTCLGYEKVLVG REQKLNAIQPQEECNTCNVKCLNDGIRIRSTGFKMYTAVACAHGSCKTITQKPSSEILVP YPGITASSGGKIGITLSHDDSKVSAHLTAHCKGRDPCEVYSCFFCWENFLNYQCHNVLSA LVSTMIIISLLWVSLSIIVKILRRVKLIPSYVKNPLAWMIYLWTWTVRSLLAYFRRKIYS LNHQIGWNGDIEMGENRPRRRVDNPLGLRNLVPLQRYSLLFMFLVMTVSADACSQSVVAS SKIVRCRVESSKTVCKVSGSVVLKAGVIGSDSCLIIKGSSEGQKALMTVRTISSELVCRE GQSFWTGQFTPSCLSSRRCHLVGECVEKDCQSWRDNVTSGEFGALGDNEMMTENKCFEQC GGLGCSCWNINPSCLFVHTKLVSTRKEAVRVFSCSEWVHRVTLEITTPKKEKDTVILTNL GSKFLSWGSISLSIDAEAITGSNSYTFLQSTTGGFALLDEGLQTIPREGYLGEIRCSSEA AVINGHKSCLRAPNLVKYKPMTDIVECTTSLVDPFAVFLRGSLPQMREGMTFTSTKDKKS VQAMSSYAIKAEINLLLDDYDVEFAEDVVNCEASFVNISGCYSCNLGALICLTIKSPREG TFSSHNSDSTLVLATHTSAGTQDYCMMTHFNTPHVEEELTYSCGGDEKKIEITGTLIAML PYDDRNTTGGDSTVVNPASSSWSFLEWFKGLFSWLGGPLKGFFVIAGYVIASIILIILIL MVLRFLVARLMAVILKKTK NT seq 4020 nt NT seq  +upstreamnt  +downstreamnt atgatatatctaccaatactacttctgctgaggcttactgcggcaagttttgtcctcgag tctacaagacctaaaggacattcttccaaggtttgtctgagcaatactagctcctccaaa attttagaaagatactgggacaatcttgaacagggaatgccaaacgggccaagaatgtgc tctataggatctggtgagtctcacctgacaagtggggcaaacataaagaagctcataagg gatgttcgagactccccaacagcactaaatgttagctgtgtagttgcaaatcagccagag cactcaatttccattgcttttttggagatccctgatgacttcattaagcccaccagtatt gactgtgttacaggtgagtcaattagagaagtgggaactttagacgaggctgcttctcca ccagactttcacaaaccagtgatcattgagatggacgaagacactgactttctccctcct agagtgctcccagcatctaatgatatcaggccagtcactctcgacacacgccatggtcac atcacaagagatgaggaaaagatagcactgcagctagaggtggacacccttcgtgaccag ctcggagttgagagaaggcagattgctgaactgaacagtatcatgcagaacacggctaac atggctgactctgagagagagcagaatcaaaagacaattagcgaaaaacacaggcagata catgaccagacccggcagattcatgagcttgaaagagagatcatgagactcagcaggcca acaactcttccacttctgaaaacaactctagcagttatgacagccgtatccttgctacct gcttctgatgctgtattatggcctcacacacggaatagaataggttctgggctatacaaa atgtcagatgatgattctgttgactgtagaccagtgaattatctagaaggatgttatggg tttgaattgctgttagattcgtcccagtatcctttcttttcatctcatagcacatttaga tctctgctagaagcagtcaatgataacattgttaacaaaaataatgaagggatatgcctt agcaacagttcacaaaaggatcctaagtgtcattcagataaggcactaatgcaggcctac tgtccaaataatttcagatctgctcactatatagatgataatggccagctcagaggagtg gtctgcaaagagggatatgagataactgaagactgcaacttttgcaggaaaatcaagaaa tctgcaaaccagaataaggatgtttacaagtcatctgttcagatgcaggacatagtttgt cagccaggaggagaagcatatgatggcccaaagataagacctaaaggagcatgctttatt gggaacagagttttcaagaagtgcaaacttatgtcaaaatcctatgaggtcgtcccgttt gtcactgttccatcaaaagggaagatttatcttgacacaatgatactcaagaatgaagaa gtgatctcagaagactcctttgtctgctatgatcatagaggccaagagggtgggtcagtt gccacagaacaagagtcaagagggcttaatgcagtcagagtatcagaatgtaagatagtg aactcggcaaaaacaaagaagtgctcaggagatgctgttttctgttcaaagtacaagtgt gcaaacgagtatccagaggtgtactgtcgacatgttcctggtgccgggaacttgaaagtg ttgatgtcaggacaatggataaagcctacatgtcttggttatgagaaagttctggttggc agagagcagaaacttaatgcaatacaacctcaggaggaatgcaacacctgcaatgtgaaa tgtttaaatgatggcattaggattaggtctaccggatttaagatgtacacagcagttgct tgtgcacatggttcatgtaagactatcactcagaaaccttcttcagaaatcttagttcca tatccaggtataactgcttcatcaggtgggaaaattggaatcactctttctcatgatgac tcaaaggtcagtgcgcatttaactgcccactgcaaaggacgagatccatgtgaagtatac agttgctttttttgctgggagaattttctaaactaccaatgtcacaatgtcctgagtgct cttgtctccaccatgattatcatatcacttctatgggtctctctgtcaattatagttaag atccttaggagagtcaaattgattccttcatatgtcaagaaccccctggcttggatgatt tacttgtggacatggacagtgcgcagtctattagcttacttcaggaggaagatctactca ttgaatcatcagattggatggaatggtgacatagaaatgggtgaaaatcgtccaagaaga cgtgtggacaatcctcttggattaagaaatcttgttccactgcaaagatattcattattg tttatgtttctggtgatgactgtaagtgctgatgcctgctctcagagcgttgttgcaagt tccaaaatagtgagatgcagagtggaaagcagcaaaacagtatgcaaagtttcaggatct gttgtccttaaagctggagtcatagggtcagattcttgtctcatcataaaaggttcttct gaaggacaaaaggctctgatgactgttcgaactatctctagtgaattggtatgcagggaa ggtcaatctttctggacaggccagttcactcctagttgtttaagttcaagaagatgccat ctggtgggtgagtgtgttgaaaaagattgtcagtcatggagggataatgtcacatctggg gagtttggggctctcggagacaacgagatgatgacagaaaataaatgctttgagcaatgt ggcggtctcgggtgttcttgctggaacataaatccctcttgtttgtttgttcacacaaaa ttggtttcaacaagaaaggaagcagtcagagtcttcagctgctcagagtgggttcacagg gtgacattggagataacaacacccaagaaggagaaagacaccgtgattttgaccaacctg ggctccaaatttctatcatggggatcaatctcactttctatagatgcggaagccattaca ggatcaaatagttacacgtttctccaaagcacaacaggaggatttgctctactggatgag ggactgcagactatccctagagaagggtatcttggagaaatcaggtgctcttcagaggca gcagttatcaatggccataaatcatgcttgagagcacccaatttagttaagtacaagcct atgaccgacattgtggaatgcactacctctttggtagacccatttgcagtctttttaagg ggctcacttcctcagatgagagagggcatgactttcacttcaacaaaggataagaagtct gtgcaggcaatgtctagctacgcaattaaagcagaaataaacctattgctagacgactat gatgttgagtttgctgaggatgtagtaaattgtgaagcctcctttgtcaacatatcagga tgttatagttgtaatttgggagccctaatatgtttaacaatcaaaagccctagagagggg actttttcatcacataatagtgatagcacccttgttctagctacgcacacatcagcaggc actcaagattattgcatgatgacacatttcaacactcctcatgttgaagaggagctcaca tattcatgtggtggagatgagaaaaagatagaaataactggcactctaatagccatgcta ccatatgatgacaggaacactactggaggagactcaacagtagtaaatcctgcgagctca tcatggtcttttctggaatggttcaaaggcttgttttcttggcttggagggccattaaag ggattctttgtgattgctgggtatgttatagcatcaatcattttaatcatactcattcta atggttttaagatttctagtggctagactgatggctgtaatattaaagaaaacaaagtaa

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