Viruses: 80557392 Help Entry 80557392          CDS       T40000                                  Symbol QK584_sLgp1 Name (RefSeq) Nile warbler virus; polymerase   KO K26694   Phenuiviridae RNA-directed RNA polymerase L [EC:2.7.7.48 3.1.-.-] Virus 2848001  Nile warbler virus Taxonomy SSDB OrthologParalogGFITVOGVOG cluster Motif Pfam:  Bunya_RdRp L_PA-C-like L_protein_N Flu_PB1 Motif Other DBs NCBI-GeneID:  80557392 NCBI-ProteinID:  YP_010839695 RS:  NC_078048 UniProt:  I1T337 LinkDB All DBs Position NC_078048:17..6328 Genome browser AA seq 2103 aa AA seqDB search MLLAISSRTTHVQGLNCPPAVTHTSSHMRPPIPAFLLWTEGSEVLIDFDLDSLPVGSVTG SSIGPKFKIKTQSASSFVHDFTFAHWCDASDMPLRDHFPIVNDTFDHWTPDFIAQRLDGS KVVVEFTTNRSDSEQSLLGAFNTKVGKYEVALHNRAAFTDVLFGVVVVSETTVVTNLDLN QQEVDELCFRFLVARAVHLEMTSKMIIPEYDDVDEDKRSREVKAAFHSVQPNWEETEGKF YPFTKKMFQKFSQSEPDKEYLTHIITDAMKQAKEDLKKNHYLDEILTEQDRLKKNRAESL TMVQSYEAEFNASAERSPWSHKSTIPFPGIIPKVSGDTTSISRLAELPVITGGSDATIRA WRTAYGSVCNGSVERCDEDVEQERRAALCSLTVEEIDEAKAMRVKYHRCKIDNGLMDKLE LALQGVEAKEFRSHPAIMRKRQESKKTFPLTADTRDIDLFLHHDDEMFNDGESQTPPASM IEAIKAGAEAQSLHGIKSHDNPWYKACLWFLGLPIGLWLFMCTCIGVELSISLKQHCGRQ KFIIKKLRFFDIFLLVKPTNSGSHVFYSLAFPESAILGKLHRSQCFKGLSFEDGWFWTEF SSFKMSKLTNVVKTLSTGFNLFWFWRDFYEVPFWTGSAKDYLSGKKRAHKMFKFCLLMLL EDKARTEEIATLSRYVMMEGFVSPPCIPKPQKMIEKLPRMARTKFQVWLISKMLQTILRV SDFPFKITAGHRSANWNGIFNWVTGEPLETTQKLISLFYLGYLKNKEESPERNASIGMYK KILEYEDKHPGRYNYLGLGDPPSDDLRFHEYSVSFLKHLCLHAEHDLRRNWGESFRSMIT RDIVDAIASIDLERLATLKASSNFNEEWYQKRTDGKVYHRCKVLEKVSQYIKKSSSHLHH IMEECLRKVEGQGCMHICLFKKPQHGGLREIYVLGFEERVVQLVIETIARQICKRFKSET LTNPKQKLAIPETHGLRAVKTCGIHHETVATSDDAAKWNQCHHVTKFALMLCHFTDPLFH GFIIRGCSLFMRKRIMIDQSLIDIIDSHTSLDTTDEYLQKIHRGYHGSIDEQPRWMVRGG AFVQTETGMMQGILHYTSSLLHTLLQEWLKNFAQKFIRSKASVDQRPDVLIDVLQSSDDS GMMISFPSMDKATTGKYRYLAALIFKFKKEVGRYLGIYSSVKSTNNTLHLLEFNSEFFFH INHNRPLLRWITACDTISEQESLASRQEEMYNNLTSVLEGGGSFSLVTFCQYGQLMLHYT LLGMTVSPLFLEYIKLVSEIKDPSLGFFLMDHPFGSGLSGFKYNVWVAVQNSVLGSRYRC LLEAIQDSTSDTPKKTLDTTSSGTFVQSTIIRFGDRKKWQRLVDRLSLPADWLEIIDDNP EVVYRRPRDGFEVSLRIAEKIHSPGVSNSLSKGNCIIRVISSSVYILSRNILSDGLAWLY DEEEMVKRPLLFKVVNQPALDLHSRLTPAQLSSLFPMMAEFEKLQIHLRSYSKIEGEFIS KSKVITQTRINILETERFLRARPEDLVADMWFGYTRTRMTPRTFREEWRHLVSVFPWLKD SPKDTLESSPFQHHVQLRNFLSRLDLKGRDIRIIGAPIKKSSGVSNVSTAIRDNFFPRFM LSHNPDEAAMERIEAAGILKHALFLTVTGPYTDETKLEMCRDFIINSESISLRPNHGKTR SNVLSLFQDYFSSVGPDIIFNRIELANCGVIGGFTSPQTPKEIDGKVVYTGDGVWRGMVD GFQVQLVITYMERQKSNQLKSITVNSDRSITVLSSFCHSWCKEMGVHNTEDFSKTQRITR ASFFMREFRISGSRQPLGAPIFIVSDKIYRPIQWDPSNLEFRIRGTTLNLTYRENVPRAW PRMFNILSYTVRDTDVSDENAFKLMSLSPRHRFHGREPSTSWICMRALPINTIEKLLSRI QSNERISAAIDNGRLAECFKNVLESSLRRKGVFLSEFTRATQKMLDSMSKDMMDFFAEAG LDEDLLLEEEPWLEGLDAFTLNDEEYLEEYNLGPFGMFSVEQEMNTKYYHHLLLDSLVED VIQKLSLDGLRRLFSEGEAPLEFRKEVERMFALLQRDSSKVRWVRRELLSDNMGLDVDDD MFG NT seq 6312 nt NT seq  +upstreamnt  +downstreamnt atgcttctagcgatatcatcaagaaccactcatgtccagggtctcaactgccctccagca gtcacccacacctccagtcacatgaggcctccaatccctgccttcctcttatggaccgag ggatcagaagtactgatagactttgatctggacagccttcctgttggatcagtcaccggc tcttctataggcccaaaattcaagataaaaacgcagtctgcatcctcctttgtccatgac ttcacatttgcacattggtgtgatgcatctgatatgcctctgagggaccatttccctata gtcaatgacacttttgaccactggactcctgatttcattgcacagagactggatggaagc aaagtggtagtggaattcaccactaacagatctgactcagagcaatccttattgggagcc ttcaatactaaagtaggaaagtatgaagttgccctgcacaatagagcagcatttactgat gttctgttcggggttgttgtggttagcgagacgacagtggtgaccaatctggatctgaat cagcaagaggtggatgagctttgctttaggttcctggttgcaagagctgttcatttggag atgacctctaagatgatcattccagagtacgatgatgtagatgaggacaagaggagcaga gaagtcaaggcagcattccactctgttcaacctaattgggaagagactgaaggcaagttt tatccatttactaagaagatgttccagaagttctctcagtctgaacctgacaaagagtac ttaactcacatcattacagatgctatgaagcaggctaaagaagacttgaagaaaaaccat tatctggatgaaatcctcacagagcaagatcgtctcaagaagaacagagcagagagtctg acaatggttcaaagttatgaggctgagtttaatgcatctgctgagaggtcaccgtggagt cataaatccacaattcccttcccaggaatcatcccaaaagtgagtggagacacaacctca atctcaagacttgctgagctgcctgtaataactggtggctcagatgcaactatcagagca tggaggacagcctatggctctgtgtgcaatggatcagttgagaggtgcgatgaggatgta gagcaggagagaagagctgccctttgttccttgaccgttgaagagatcgacgaggctaaa gccatgagagtgaagtaccacaggtgcaaaattgacaatggcctcatggacaagctagag ctagctttgcagggtgtggaggctaaggagttcaggtctcacccagccatcatgaggaaa cgacaagagtccaagaaaactttcccactgactgctgacacaagagacatagacttattt ctccatcatgatgacgaaatgttcaatgatggcgagtctcaaactcctcctgcttcaatg attgaagcaatcaaggcaggagctgaggcacaatcactgcatggcattaagagtcacgac aatccctggtacaaagcttgcctatggtttcttggccttcccataggcttgtggctcttc atgtgcacatgcataggggtggagctcagcatcagcttgaaacagcactgtggcaggcaa aagttcataatcaaaaaactcaggttctttgacattttcctcctagttaagcccacaaat tctggcagtcatgttttctactcattggctttcccagagagtgccattctgggtaagcta cacagatctcagtgctttaaaggactctcatttgaagatggatggttctggactgaattc agttcattcaagatgtcaaagctgaccaatgtcgtgaagacgttgtcaactggctttaac ctattttggttctggagagacttttatgaagttcccttctggacagggagtgcaaaggac tacctatctgggaaaaagagggctcacaaaatgtttaagttctgtcttctgatgctcttg gaagataaagcacgtacggaagagatagccacactatccaggtacgtcatgatggagggc ttcgtgagtccaccctgcataccaaaaccacagaaaatgattgaaaagttgccaagaatg gctaggaccaaattccaggtgtggttgatttctaaaatgctccaaaccatacttagggtt tcagatttccccttcaagatcacagctggtcacagatcagccaactggaatgggatcttt aactgggtgacaggagagccactagaaaccactcagaagttgatctccttgttctatctg gggtacctaaagaacaaggaggagtctcctgagagaaatgcaagcattgggatgtacaag aagatattggagtatgaggacaaacatccaggaagatacaattatcttggcctgggggac ccaccaagcgatgatctgagattccatgagtattctgtcagctttcttaagcatctctgt ctccatgctgagcacgatctgaggagaaactggggagaatctttcaggagcatgatcacc cgagatatagtagatgccatagcatccattgatctggagagattggcaaccttgaaggct tccagcaacttcaatgaagaatggtatcagaaaagaactgatgggaaggtctaccacaga tgcaaagttctagagaaagtgagccagtacatcaagaagagcagctcacatctgcatcat attatggaagagtgtctcaggaaagtggaaggacagggctgcatgcacatctgtttgttc aagaagcctcagcatggtggactgagagaaatttatgtgttaggctttgaggagagggtg gttcagctggttattgagaccattgccagacaaatttgcaagcgcttcaaatcggagacc ctcaccaaccccaaacagaaattggccattccggaaactcacggactaagggctgtcaag acatgtggaatccatcacgaaactgtggccacctctgatgacgcagcaaagtggaaccag tgccatcatgtgacaaaatttgctctcatgctttgccacttcactgatcctctctttcat ggattcatcattcgtggctgctctctattcatgaggaagaggatcatgattgatcaaagt ctcattgatattattgactcccacacctctctggacacaactgatgagtacctacagaaa atccatcgaggttatcatggtagtattgatgagcaacctaggtggatggttagaggcgga gcatttgtgcagacagaaacaggcatgatgcaaggtatactgcattacacttctagtttg ctccacactctgctccaggagtggttgaagaactttgctcagaagtttatcagatcaaag gcttctgtagatcaaagacctgatgttctcatagatgtccttcagagttctgatgactca ggcatgatgatatcctttccatcgatggataaagcaactacagggaagtacagataccta gctgctctaattttcaaattcaaaaaggaagttgggcggtatttggggatctactcatcc gtgaaatctaccaacaacactttgcacctccttgaattcaactcagaattcttcttccac atcaatcacaacaggccattgttaagatggataactgcttgtgatactatctccgaacag gaatctttagcgtctcgccaggaggagatgtataacaacctcacatctgttctcgagggt ggaggtagcttctctttagtcaccttttgtcagtatggtcaactaatgctccattacaca ctccttggcatgactgtctcacctcttttcctggagtatattaaactagtgtctgagatc aaggatccctcacttggtttctttttgatggaccacccttttggatccggcctctctgga ttcaaatacaatgtttgggtagcggttcagaacagtgtgctcggatctaggtacaggtgt ttgcttgaagcaattcaagattcaacatcagacacacctaagaaaactctggacacaaca tcttcagggacttttgtgcagtcaaccatcataagattcggagacagaaagaagtggcaa agattggtggatagactaagtctccctgcggactggcttgagataatagacgacaaccct gaggtagtgtacaggaggccacgggatggatttgaggtctcgctgagaattgcagagaag atacattctccaggagtctcaaattccctatcaaaagggaactgcattatccgagtgatc tcatcctctgtgtacatactgagcaggaacatcctgagtgatggacttgcttggctgtat gatgaggaagagatggtcaagagaccactgctgttcaaggtggtaaatcagccagcattg gatctgcactcaagattgaccccagctcagttgtcatccctgttcccaatgatggctgag tttgaaaaactacaaattcacctgaggagctactccaagatagaaggggaatttatttca aaaagtaaggtcataacccagactagaataaacattctggaaacagagaggtttctgaga gcaagaccagaggacctggtggcagacatgtggtttgggtacacccgaacaaggatgact cctagaacctttagagaggagtggagacacctagtttctgtgtttccatggctaaaggac tctcctaaagacaccctggaatcatccccatttcagcatcatgtccaactcagaaatttc ctcagtcgcctggacctaaaaggtagagacatcagaataattggagctccaattaaaaaa tccagtggagtgagcaatgtgtcaacagccatcagggataatttctttccacggttcatg ctcagccacaatccagatgaggcagccatggagagaattgaagcagctgggatcctaaaa catgctctgttcctgacagtgacaggaccatacacggacgaaactaagctagaaatgtgc agggatttcatcatcaactcagagtcaatctctttgagaccgaatcacggaaaaactcgg agcaatgttctttctctgttccaagattacttctccagtgtgggtcctgacatcatcttc aacaggattgagctagcaaactgtggagtcattggtggcttcacgtctcctcagaccccc aaggagatagatggaaaggtggtctacactggagatggggtgtggagaggcatggtagat ggattccaagtgcagctggtgatcacgtatatggagagacagaagtctaaccaactaaag agtattacagtaaactcagatcggagcatcactgtgctcagcagtttttgtcattcgtgg tgtaaggagatgggagttcacaacacagaagacttctccaagactcagaggattaccaga gcctctttcttcatgagggagtttaggatttccggatcacgacagcctctaggagcaccc atattcattgtgagtgacaaaatctacagaccaattcaatgggacccgtcaaatcttgag tttagaataagaggaaccactctaaatctgacctacagagagaatgtgccaagagcgtgg cccagaatgttcaacattctcagctacacagtgcgtgacactgatgtatctgatgagaat gctttcaagctcatgtctctttctccaaggcatagatttcatggacgagagccgagcacc tcttggatctgcatgagagcccttcccatcaacacaatagagaagctcctgagtaggatc cagagcaatgaaaggatcagtgctgcaattgataacgggaggcttgctgaatgcttcaag aatgttctggaatcatcactgaggaggaagggagttttcctatcagagttcacaagggct actcagaaaatgctggacagcatgagtaaggacatgatggacttctttgcagaagctgga ttggatgaggacctcctccttgaagaagaaccctggctggagggtctggatgctttcacc ttgaatgacgaggagtacctagaggaatacaacctgggtccgtttggcatgttcagtgtt gagcaagaaatgaacacaaaatattaccatcacttgcttttggactctttggttgaggat gtcattcagaaattgtccctggatgggctgcggcgtttgttctctgagggagaggcccct ctggagttccggaaggaggtagaacgaatgtttgcacttctgcagagagactcctcaaag gtcaggtgggtgaggcgggagcttctctcagataacatgggtctagatgttgatgatgat atgtttggttaa

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