Viruses: 912254
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Entry
912254 CDS
T40000
Symbol
V, SbCMVgp6
Name
(RefSeq) Soybean chlorotic mottle virus; putative reverse transcriptase
Virus
10651
Soybean chlorotic mottle virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Peptidase_A3
RVT_1
RT_RNaseH
RT_RNaseH_2
RVP_2
Asp_protease
RVP
gag-asp_proteas
Motif
Other DBs
NCBI-GeneID:
912254
NCBI-ProteinID:
NP_068729
RS:
NC_001739
UniProt:
P15629
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All DBs
Position
NC_001739:2539..4617
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AA seq
692 aa
AA seq
DB search
MNTEIVQKHRVLTKGNPNVTFIKVSIGKRNFLAYIDTGATLCFGKRKISNNWEILKQPKE
IIIADKSKHYIREAISNVFLKIENKEFLIPIIYLHDSGLDLIIGNNFLKLYQPFIQRLET
IELRWKNLNNPKESQMISTKILTKNEVLKLSFEKIHICLEKYLFFKTIEEQLEEVCSEHP
LDETKNKNGLLIEIRLKDPLQEINVTNRIPYTIRDVQEFKEECEDLLKKGLIRESQSPHS
APAFYVENHNEIKRGKRRMVINYKKMNEATIGDSYKLPRKDFILEKIKGSLWFSSLDAKS
GYYQLRLHENTKPLTAFSCPPQKHYEWNVLSFGLKQAPSIYQRFMDQSLKGLEHICLAYI
DDILIFTKGSKEQHVNDVRIVLQRIKEKGIIISKKKSKLIQQEIEYLGLKIQGNGEIDLS
PHTQEKILQFPDELEDRKQIQRFLGCINYIANEGFFKNLALERKHLQKKISVKNPWKWDT
IDTKMVQSIKGKIQSLPKLYNASIQDFLIVETDASQHSWSGCLRALPKGKQKIGLDEFGI
PTADLCTGSSSASSDNSPAEIDKCHSASKQDTHVASKIKKLENELLLCKYVSGTFTDTET
RYPIAELEVLAGVKVLEKWRIDLLQTRFLLRTDSKYFAGFCRYNIKTDYRNGRLIRWQLR
LQAYQPYVELIKSENNPFADTLTREWSKPSSS
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgaatactgaaattgtccaaaaacaccgagttttaaccaaaggtaaccctaatgttact
ttcataaaagttagtataggcaaaagaaatttcttggcttatattgatactggagcaact
ctgtgctttggaaaaagaaaaatttcaaataattgggaaattttaaaacaaccaaaagaa
attatcattgcagataaatcaaaacactatattagagaagctatttctaatgtgttttta
aaaatcgaaaataaagaattcttaatccctatcatatatttacatgattcaggattagat
ttaattataggaaacaatttcctaaaattataccaaccttttattcagagattggaaaca
attgaattaagatggaaaaatcttaataacccaaaagaatctcaaatgatttcaaccaag
attcttacaaaaaatgaagtattaaaactttcatttgaaaaaattcatatttgtttagaa
aaatatttatttttcaaaacaattgaagaacaactcgaagaagtatgttcagaacatcca
ctggatgaaacaaaaaataaaaatggtcttttaatagaaataagacttaaagacccatta
caagaaataaatgtcacaaatagaattccatatacaataagagatgtacaagaattcaag
gaggaatgtgaagacctcttaaaaaagggcttaattcgagaatctcaaagtccacacagt
gcaccggcattctatgtcgaaaatcacaatgaaatcaagcgtggaaaaagacgcatggta
attaattacaaaaaaatgaatgaagccacaattggcgattcatataagttaccaagaaaa
gattttattctggaaaaaataaaaggatctttatggttttcaagcttggatgctaaatct
ggatactaccagctaaggctccatgaaaatacaaagcctctaacagctttttcatgtcca
cctcagaaacattacgaatggaatgttttaagttttggacttaaacaagcaccatctata
tatcaaagatttatggatcaatccctcaagggacttgaacatatatgtttggcatatatt
gatgacatcctgatctttacaaaaggatctaaagaacaacatgtaaatgatgttcggatt
gttttgcaaagaatcaaagaaaaaggaattattatttctaagaaaaaatcaaaactgatt
caacaggaaatcgaatatctcggtttaaaaatacaagggaatggagaaattgatttatca
cctcatacccaagaaaaaattcttcaatttcctgatgaattagaagatagaaaacaaata
cagcgttttcttggctgtattaattacattgcaaatgaaggatttttcaaaaatcttgct
ctagaaagaaagcaccttcaaaagaaaatttctgttaaaaacccctggaaatgggataca
atagatacaaaaatggttcagtccataaaaggcaaaattcaaagcctaccaaaattatat
aatgcatcgattcaagactttttaatagtcgagacagatgcatcgcaacactcctggagt
ggatgtttgcgagctttacccaagggaaagcaaaaaatcggactcgatgaattcgggata
ccgacagctgacctctgcacaggtagcagttcagcttcaagcgataattcgccagctgag
attgacaaatgtcattcagccagtaaacaggacactcatgtggccagtaaaataaagaaa
ctcgaaaacgagcttctactttgcaaatatgtttcaggtaccttcacagatacggaaaca
agataccctatagcagaactggaggttcttgctggagtaaaagtcctagaaaaatggaga
atcgacctcctacaaacgaggttcctcctccgcactgacagcaagtactttgcaggtttt
tgtaggtacaacatcaagacagactaccggaacggacgtctaatcaggtggcaactacgg
ttacaagcctatcaaccgtacgtggaattaatcaaatcagaaaataacccattcgcagat
acgcttacgcgagaatggagcaagccatcaagcagttaa
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