Viruses: 918232
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Entry
918232 CDS
T40000
Symbol
A122/123R, PBCV1_A122/123R
Name
(RefSeq) Paramecium bursaria Chlorella virus 1; pre-neck appendage protein
Virus
10506
Paramecium bursaria Chlorella virus 1
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Chlorovi_GP_rpt
Peptidase_G2
Motif
Other DBs
NCBI-GeneID:
918232
NCBI-ProteinID:
NP_048471
RS:
NC_000852
UniProt:
Q84443
Structure
PDB
PDBj
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Position
NC_000852:62145..66176
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AA seq
1343 aa
AA seq
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MGSYFVPPANYFFKDIFASNVGNIANVIFDNGNVIAAGGLGYLIGNGAFITGVTSTAIAN
IPAVVTADIRGNLIGNYANVNNIIASSGNISNVRFVSGGNVTASYYFGDGSQLTGITATA
NIPSIVTADIRGNIIGNYANVSNVSATFGNIANVLFNNGNVTAAGGNGFFIGNGSLLTGI
TATANIPSIVTADIRGNIIGNYANVSNVSATFGNIANVLFNNGNVTAAGGNGYFFGNGAL
LTGITATANIPSIVTADIRGNIIGNYANVSNVSATFGNIANVLFNNGNVTAAGGNGYFFG
NGALLTGITATANIPSIVTADIRGNIIGNYANVSNVSATFGNIANVLFNNGNVTAAGGNG
FFIGNGSLLSGITATANIPSIVTADIRGNIIGNYANVSNVTATFGNIANVLFNNGNVTAA
GGNGYFFGNGSQLTGVTATLPSIVTADIRGNIIGNYANVSNVIATFGNIANVLFNNGNVT
AADGNGYFFGNGSQLTGVTATLPSIVTADIRGNIIGNYANVSNVIATFGNIANVLFNNGN
VTAAGGNGYFFGNGALLTGITATANIPSIVTADIRGNIIGNYANVSNVIATFGNIANVLF
NNGNVTAADGNGYFFGNGSQLTGVTATLPSIVTADIRGNIIGNYANVSNVIATFGNIANV
LFNNGNVTAAGGNGYFFGNGALLTGITATANIPSIVTADIRGNIIGNYANVSNVTATFGN
IANVLFNNGNVTAAGGNGYFFGNGSQLTGVTATLPSIVTADIRGNIIGNYANVSNVIATF
GNIANVLFNNGNVTAAGGNGYFFGNGALLTGITATANIPSIVTADIRGNIIGNYANVSNV
TATFGNIGNVLFNNGNVTAAGGNGYFFGNGTFLNFSTITADIRGNIIGNYANVGNVIAGN
VSTTLGNIGNVLFNNGNVTAAGGNGYFFGNGTSLTFSTIRADIRGNIIGNYANVANVIAG
NVNSTFGNIAGVTFDAGNVSSPVDILVSGNVSVGSDGLFRGPTNQSNNALILRGIGGTNT
VNLFSIGAPSGQMRFSVPASGVAFYNFLYGTNQVASLGPQGFYSLSYDSSVVVGQVVSNS
TTYSGTIFKTEANRNSSTAFNHISCTGSNGNVFRVRGDGTTYGVGAFQTSGADYAEMMEW
EDKNPTFEDRRGYPVVLSGNGKIRIASLSDDYNNIIGVVSSNPSMLADMAWDQWEGKYLK
DKFGMRLSNTIYYLANISNENEFTRVGPMTTPPQGYFIKTSPEYILNPKYNPNVAYVERN
DRPEWDPVGFVGKLRVRNGCLVHPSWKPLKVIDDYADVGNAAAQVTEYLIGVTPNYTLSK
KVEDLEQTINVLKTQVQMLLGNI
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atgggatcgtattttgtcccaccggcgaattattttttcaaagatattttcgcgtcaaat
gttggaaacatagcaaacgtaatttttgataacggtaatgttatagctgccggaggtctt
ggttacttaataggtaacggcgcattcatcacgggagtcacatcaactgcaatagcgaac
attccagcagtagtgaccgcagatatccgcggaaatctcatcggtaactacgccaatgtc
aacaatataattgcatcatctggaaacatctctaacgtcagattcgtatcgggtggaaac
gtgacggcatcttattatttcggagatgggtctcagttgactggtatcaccgcgactgct
aatatcccatccatagtgactgcagacatccgaggtaacatcatcggtaattacgcaaac
gtcagcaacgtatctgcaaccttcggaaacatcgcgaacgtgctgttcaacaacggtaat
gtgacggcagcgggtggtaacgggttctttataggaaacggatcgctgttgaccggaatc
accgcgactgctaatatcccatccatagtgactgcagacatccgaggtaacatcatcggt
aattacgccaacgtcagcaacgtatctgcaaccttcgggaacatcgcaaatgtgttgttc
aacaacggaaacgtaacggcagcgggtggtaacgggtacttcttcgggaatggggcgttg
ttgaccggaatcaccgcgactgctaatatcccatccatagtgaccgcagacatccgaggt
aacatcatcggtaattacgccaacgtcagcaacgtatctgcaaccttcgggaacatcgca
aatgtgttgttcaacaacggaaacgtaacggcagcgggtggtaacgggtacttcttcggg
aatggggcgttgttgaccggaatcaccgcgactgctaatatcccatccatagtgactgca
gacatccgcggaaacatcatcggtaactacgccaacgtcagcaacgtatctgcaaccttc
ggaaacatcgcgaacgtgttgttcaataatggaaacgtaacggcagcgggtggtaatggg
ttcttcatcggaaatgggtcgttgctgtctggtatcaccgcgactgctaatataccatcc
atagtgactgcagatatccgaggtaacatcattggcaactatgcaaacgtcagcaacgta
acggcaacgtttggaaacatcgcaaatgtgttattcaacaatggaaacgtaacggcagcg
ggtggtaatggttatttcttcgggaacgggtcccagttgaccggtgtcactgccacttta
ccttccatagtaaccgcagacatccgcggaaacatcattggcaactacgcaaacgtcagc
aacgtaatcgcaacgttcggaaacatcgcaaatgtgttattcaacaatggaaacgtaacg
gcagcggatggcaatggttacttcttcgggaatgggtcccaattgaccggtgtcactgcc
actttaccttccatagtaaccgcagacatccgcggaaacatcattggcaactacgcaaac
gtcagcaacgtaatcgcaacgttcggaaacatcgcaaatgtgttattcaacaatggaaac
gtaacggcagcgggtggtaacggttacttcttcgggaatggggcgttgttgaccggaatc
accgcgactgctaatatcccatccatagtgactgcagacatccgcggaaacatcattggc
aactacgcaaacgtcagcaacgtaatcgcaacgttcggaaacatcgcaaatgtgttattc
aacaatggaaacgtaacggcagcggatggcaatggttacttcttcgggaatgggtcccaa
ttgaccggtgtcactgccactttaccttccatagtaaccgcagacatccgcggaaacatc
attggcaactacgcaaacgtcagcaacgtaatcgcaacgttcggaaacatcgcaaatgtg
ttattcaacaatggaaacgtaacggcagcgggtggtaacggttacttcttcgggaatggg
gcgttgttgaccggaatcaccgcgactgctaatatcccatccatagtgactgcagacatc
cgcggaaacatcatcggtaattacgcaaacgtcagcaacgtaacggcaacgttcggaaac
atcgcgaacgtgttgttcaacaacggaaacgtgacggcagcgggtggtaatggttatttc
ttcgggaacgggtcccagttgaccggtgtcactgccactttaccttctatagtaaccgca
gacatccgcggaaacatcatcggtaactacgcaaacgttagcaacgtaatcgcaaccttt
gggaacatcgcgaacgtgttgttcaataatggaaacgtaacggcagcgggtggtaacggg
tacttcttcgggaatggggcgttgttgaccggaatcaccgcgactgctaatataccttct
atagtgactgcagacattcgaggtaacatcatcggtaactatgccaacgtcagcaacgta
acggcaaccttcggaaacatcggaaacgtgctgttcaacaacggtaacgtaactgcagca
ggcggtaacgggtacttcttcggaaacggaactttcctcaacttttccactataactgcc
gatatccgcgggaacatcataggcaactatgcaaacgtcgggaacgttattgcaggtaac
gtatcaacaaccctcggaaacatcggaaacgtgctgttcaacaacggtaacgtaacggca
gcaggcggtaacgggtacttctttggaaatggtacctcactcactttttctacgataaga
gctgatattcgcggaaatatcattggtaattatgccaacgttgcaaacgtgatcgcgggt
aatgtcaactcaacctttggaaacatcgctggtgttacatttgacgctggaaacgtatca
tcgcccgtggacattttggtgtctggtaatgtatctgtaggttctgatggattattcaga
ggtccaactaaccaatcaaacaatgcactaattttaagaggtattggaggtacaaacact
gttaatctgttcagtataggtgctccttcgggtcagatgagattcagcgttcctgcttcc
ggggttgcattttacaactttttatatggaactaatcaggttgcctcattaggtcctcaa
ggattttatagcctttcgtatgattcttcggtggtcgtaggacaagtcgtctcgaacagt
actacatattctgggactatctttaaaactgaagcgaatagaaatagcagtacagcattc
aatcacatatcttgcacagggtcaaatggaaatgtattcagagtacgaggggatggtacg
acatatggagtaggtgcttttcagacatccggtgcagattatgcagaaatgatggaatgg
gaagataagaatcctacattcgaagaccgtagaggatatcctgtcgttttatctggaaat
ggtaaaatacggattgcttcactttctgatgattataataatattattggagttgtttcg
agcaacccaagtatgcttgctgacatggcttgggaccaatgggaaggaaaatatctcaaa
gataaatttgggatgagattgagtaatactatttattacttagcgaatatttctaatgag
aatgaatttacacgtgtaggtcctatgacaactcctccccaaggatatttcataaagact
tcgccagagtatattttaaatcctaaatacaatccgaatgttgcgtatgttgagagaaac
gataggcccgagtgggatcctgtgggtttcgttggaaaattacgtgtgcgaaatggttgc
ctagtacacccttcgtggaaacctctcaaagttattgatgattatgccgacgttggaaat
gctgcagctcaagttacagagtatctcataggtgttacaccgaactatactttatcaaaa
aaggtagaagacttggaacaaacgattaatgttctcaagacccaagttcaaatgttattg
ggaaacatttaa
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