Viruses: 918345
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Entry
918345 CDS
T40000
Symbol
A011L, PBCV1_A011L
Name
(RefSeq) Paramecium bursaria Chlorella virus 1; Capsid protein
Virus
10506
Paramecium bursaria Chlorella virus 1
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Capsid_N
Capsid_NCLDV
Motif
Other DBs
NCBI-GeneID:
918345
NCBI-ProteinID:
NP_048359
RS:
NC_000852
UniProt:
Q89346
Structure
PDB
PDBj
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All DBs
Position
NC_000852:complement(6970..8181)
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AA seq
403 aa
AA seq
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MSGALNQLVAVGKQDAFITGDNLDNSVWRNVTKKVSNFAMESIENYINVNPGSTTSIVVG
RFGDLVRKVTLEITMKKGSTTNPFYPSEQYVKYAHLSIGGQIVYRIDDFPTWTRVHEELF
MDPDTRATNQRVNNFRPEDPVGAIRKFYLDIPLFFTDDASKALPLIALQYHEVKLDVLFA
SPGDIPGIDASYTPTVECYIDYVFLDTPEREWFARNTHMYVIEQLQHYNNVFSVAAVEQT
KRLNLPFTMPTRYLIWLLKTGADGVYTTSGYPFENNDSYAAIKSAKLQFNGTDRFSERPG
YYFTTVQPQDAFGRSPSAGIYVYSFGLDVTGMTSKGALNFSRMDNATLSITTKAATAATI
SDVYNQSTTLASAITDFTSIAIYAKSFNVLKIDYGMGGMLFAN
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtgctttgaatcaactcgtcgccgtgggaaagcaagacgccttcatcaccggg
gataatcttgataactctgtctggaggaacgttacaaagaaagtgagcaattttgcaatg
gaatctattgaaaattatatcaacgtaaatcctggttctaccacgagcatcgtcgtgggt
cgtttcggggatctcgtcaggaaagtaacgcttgaaattactatgaaaaaaggttctact
acgaacccattttatccatcggaacaatatgtcaagtatgcccatctatccataggaggt
caaatcgtttacagaatagatgattttccaacttggaccagagtacacgaagaattgttc
atggacccagatactcgagcaacgaaccaacgagtcaataatttcagaccagaagaccca
gtgggagcgatcagaaaattctatttggacatacctctgttcttcacagacgatgcatca
aaggcacttcctctgatcgcattgcaataccacgaagtgaaacttgatgtattgtttgca
tctccgggggacatccctggaattgacgcgtcatatacaccgactgtagaatgttacata
gattacgtattcctcgatacccctgaacgagagtggttcgcgaggaatacacacatgtat
gtgatcgagcaacttcaacactataataacgtattttcagttgcagctgtggaacaaacg
aagcgactgaacctcccttttacaatgcctacgaggtacttaatatggttattgaaaacg
ggagcggatggtgtgtacacaacgtctggttatccatttgaaaacaacgactcgtatgcg
gctataaagtctgcgaaacttcaattcaacgggacagacagattttcagaacgccctggt
tattactttaccaccgttcaaccccaagatgcgttcggaagatctccttcggcaggaata
tatgtgtattcatttggactggacgtaaccggtatgacgagtaagggagccttgaatttc
tcgcgtatggataatgcaactctaagcatcacaacaaaagctgctacagcagcaactatc
tcagatgtgtataaccaatcgactacattagcaagtgcgattacagatttcacaagtatt
gctatatatgcgaaaagtttcaacgttttgaagatagactacggtatgggcggaatgttg
ttcgccaattaa
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