Viruses: 920841
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Entry
920841 CDS
T40000
Symbol
ToMVgp1
Name
(RefSeq) Tomato mosaic virus; 184 kDa replicase
Virus
12253
Tomato mosaic virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
RdRP_2
Vmethyltransf
Viral_helicase1
ToMV_Hel_N
AAA_19
RdRP_3
Motif
Other DBs
NCBI-GeneID:
920841
NCBI-ProteinID:
NP_078446
RS:
NC_002692
UniProt:
P03587
Q77IX3
Structure
PDB
PDBj
LinkDB
All DBs
Position
NC_002692:72..4922
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AA seq
1616 aa
AA seq
DB search
MAYTQTATSSALLETVRGNNTLVNDLAKRRLYDTAVDEFNARDRRPKVNFSKVVSEEQTL
IATKAYPEFQITFYNTQNAVHSLAGGLRSLELEYLMMQIPYGSLTYDIGGNFASHLFKGR
AYVHCCMPNLDVRDIMRHEGQKDSIELYLSRLERGNKHVPNFQKEAFDRYAEMPNEVVCH
DTFQTCRHSQECYTGRVYAIALHSIYDIPADEFGAALLRKNVHVCYAAFHFSENLLLEDS
HVNLDEINACFQRDGDRLTFSFASESTLNYSHSYSNILKYVCKTYFPASNREVYMKEFLV
TRVNTWFCKFSRIDTFLLYKGVAHKGVDSEQFYKAMEDAWHYKKTLAMCNSERILLEDSS
SVNYWFPKMRDMVIVPLFDISLETSKRTRKEVLVSKDFVYTVLNHIRTYQAKALTYSNVL
SFVESIRSRVIINGVTARSEWDVDKSLLQSLSMTFFLHTKLAVLKDDLLISKFALGPKTV
SQHVWDEISLAFGNAFPSIKERLINRKLIKITENALEIRVPDLYVTFHDRLVSEYKMSVD
MPVLDIRKKMEETEEMYNALSELSVLKNSDKFDVDVFSQMCQSLEVDPMTAAKVIVAVMS
NESGLTLTFEQPTEANVALALQDSEKASDGALVVTSRDVEEPSIKGSMARGELQLAGLSG
DVPESSYTRSEEIESLEQFHMATASSLIHKQMCSIVYTGPLKVQQMKNFIDSLVASLSAA
VSNLVKILKDTAAIDLETRQKFGVLDVASKRWLVKPSAKNHAWGVVETHARKYHVALLEH
DEFGIITCDNWRRVAVSSESVVYSDMAKLRTLRRLLKDGEPHVSSAKVVLVDGVPGCGKT
KEILSRVNFEEDLILVPGRQAAEMIRRRANASGIIVATKDNVRTVDSFLMNYGKGARCQF
KRLFIDEGLMLHTGCVNFLVEMSLCDIAYVYGDTQQIPYINRVTGFPYPAHFAKLEVDEV
ETRRTTLRCPADVTHFLNQRYEGHVMCTSSEKKSVSQEMVSGAASINPVSKPLKGKILTF
TQSDKEALLSRGYADVHTVHEVQGETYADVSLVRLTPTPVSIIARDSPHVLVSLSRHTKS
LKYYTVVMDPLVSIIRDLERVSSYLLDMYKVDAGTQXQLQVDSVFKNFNLFVAAPKTGDI
SDMQFYYDKCLPGNSTLLNNYDAVTMKLTDISLNVKDCILDMSKSVAAPKDVKPTLIPMV
RTAAEMPRQTGLLENLVAMIKRNFNSPELSGVVDIENTASLVVDKFFDSYLLKEKRKPNK
NFSLFSRESLNRWIAKQEQVTIGQLADFDFVDLPAVDQYRHMIKAQPKQKLDLSIQTEYP
ALQTIVYHSKKINAIFGPLFSELTRQLLDSIDSSRFLFFTRKTPAQIEDFFGDLDSHVPM
DVLELDVSKYDKSQNEFHCAVEYEIWRRLGLEDFLAEVWKQGHRKTTLKDYTAGIKTCLW
YQRKSGDVTTFIGNTVIIASCLASMLPMEKLIKGAFCGDDSLLYFPKGCEYPDIQQAANL
MWNFEAKLFKKQYGYFCGRYVIHHDRGCIVYYDPLKLISKLGAKHIKDWDHLEEFRRSLC
DVAESLNNCAYYTQLDDAVGEVHKTAPPGSFVYKSLVKYLSDKVLFRSLFLDGSSC
NT seq
4851 nt
NT seq
+upstream
nt +downstream
nt
atggcatacacacaaacagccacatcgtccgctttgcttgagaccgtccgaggtaacaat
accttggtcaacgatcttgcaaagcggcgtctatatgacacagcggtagatgaatttaat
gctagggaccgcaggcctaaagtcaatttttccaaagtagtaagcgaagaacagacgctt
attgcaaccaaagcctacccagaattccaaattacattctacaacacgcagaatgctgtg
cattcccttgcaggcggtctccgatcattagaattggaatatctgatgatgcaaattccc
tacggatcattgacatatgatatcggaggtaattttgcatctcatctgttcaaagggcga
gcatacgttcactgctgtatgccgaatctagatgtccgcgacataatgcggcacgagggc
caaaaggacagtattgaactatacctttctaggctcgagaggggcaacaaacatgtccca
aacttccaaaaggaagctttcgacagatacgctgaaatgccaaacgaagtagtctgtcac
gatactttccaaacgtgtaggcattctcaagaatgttacacgggaagagtgtatgctatt
gctttgcatagtatatacgatatacctgccgacgagttcggcgcggcactgctgagaaag
aatgtacatgtatgttatgccgctttccacttttccgagaatttacttctcgaagattca
cacgtcaacctcgatgagatcaatgcatgtttccaaagagatggagacaggttgactttt
tcctttgcatctgagagtactcttaattatagtcatagttattctaatattcttaagtat
gtttgcaaaacttacttcccagcctctaatagagaggtttacatgaaggagtttttagta
actagagttaatacctggttttgtaaattttctagaatagatactttcttattgtacaaa
ggtgtagcgcataagggtgtagatagtgagcagttttacaaggctatggaagacgcatgg
cactacaaaaagactcttgcgatgtgcaacagtgaaagaatcttgttagaggattcttca
tcagttaattactggtttccaaaaatgagggatatggtgatagttccactatttgacata
tctctcgagactagtaaaagaacacgcaaagaggtcttagtttcaaaggactttgtttat
acagtgttaaatcacattcgtacgtaccaggccaaagcgcttacttactccaacgtgtta
tctttcgtcgaatcaattcgttcgagagtgatcattaacggggttactgccaggtctgag
tgggatgtcgataaatcattattacagtccttgtcgatgacgttcttcctacataccaag
cttgccgttctgaaagacgatcttttgattagcaagtttgcacttggaccaaaaactgtc
tcacaacatgtgtgggatgagatttccctagctttcggcaatgctttcccatcgatcaag
gaaagattgataaaccggaaactgatcaaaattacggagaatgcgttagagatcagggtg
cccgatctttatgtcactttccatgataggttagtttctgagtacaaaatgtcagtggac
atgccggtgctagacattaggaaaaagatggaagaaactgaggaaatgtacaatgcactg
tccgaactgtctgtacttaaaaattcagacaagttcgatgttgatgttttttcccagatg
tgccaatctttagaagttgatccaatgactgcagcaaaggtaatagtagcagttatgagc
aacgagagtggtcttactctcacgtttgaacagcccaccgaagctaatgttgcgctagca
ttgcaagattctgaaaaggcttctgatggggcgttggtagttacctcaagagatgttgag
gaaccgtccataaagggttcgatggcccgtggtgagttacaattggccggattatctggc
gacgttcctgaatcttcatacactaggagcgaggagattgagtctctcgagcagtttcat
atggcaacagctagttcgttaattcataagcagatgtgttcgatcgtgtacacgggccct
cttaaagttcaacaaatgaaaaactttatagacagcctggtagcctcgctctctgctgcg
gtgtcgaatctagtgaagatcctaaaagatacagccgcgattgaccttgaaactcgtcaa
aagttcggagttctggatgttgcttcgaaaaggtggctagttaaaccatccgcaaagaac
catgcatggggggttgttgagactcatgcgaggaaatatcacgtcgcattactggagcac
gatgaatttggcattattacgtgcgataactggcgacgggtggctgtgagttctgagtcg
gtagtatattctgatatggctaaactcaggactctgagaagattgctcaaagatggagaa
ccacacgttagttcagcaaaggtggttttggtggatggcgttccagggtgcgggaagaca
aaggaaattctttcgagagttaatttcgaagaagatctaattcttgtccctggtcgtcaa
gctgccgagatgatcagaagaagagctaatgcgtcgggcataatagtggctacaaaggat
aatgtgcgcaccgtcgattcatttttgatgaattacgggaaaggggcacgctgtcagttc
aaaagattgttcatagacgaaggtttgatgctgcatactggttgtgtgaatttcttggtt
gaaatgtctctgtgcgatattgcatatgtttatggagacacccaacaaattccgtacatc
aacagagtaactggtttcccgtaccctgcgcactttgcaaaattggaggtcgacgaagtc
gaaacaagaagaactactcttcgctgtccggctgatgtcacacacttcctaaatcaaagg
tatgaaggacacgtaatgtgcacgtcttctgaaaagaaatcagtttcccaggaaatggtt
agtggggctgcgtctatcaatcctgtgtccaagccgcttaaagggaaaattttgactttc
acacagtctgacaaggaggcccttctctcaaggggctacgcagatgtccatactgtacat
gaggtacaaggtgagacttatgcagacgtatcgttagttcgactaacacctacgcctgta
tctatcatcgcaagagacagtccgcatgttctggtctcgttgtcaagacacacaaaatcc
ctaaagtactacaccgttgtgatggatcctttagttagtatcattagagatttagaacgg
gttagtagttacttattagacatgtacaaagtagatgcaggtactcaatagcaattacag
gtcgactctgtgtttaaaaatttcaatctttttgtagcagctccaaagactggagatata
tctgatatgcaattttactatgataagtgtcttcctgggaacagcacgttgttgaacaac
tacgacgctgttaccatgaaattgactgacatttctctgaatgtcaaagattgcatatta
gatatgtctaagtctgtagctgctccgaaagatgtcaaaccaactttaataccgatggta
cgaacggcggcagaaatgcctcgccagactggactgttggaaaatctagttgcgatgatt
aaaagaaattttaattcaccagagttgtccggagtagttgatattgaaaatactgcatct
ttagtggtagataagttttttgatagttatttacttaaggaaaaaagaaaaccaaacaaa
aatttttcactgtttagtagagagtctctcaataggtggatagcaaagcaagaacaagtc
acaattggtcagttggccgattttgattttgtggatcttccagccgttgatcagtacagg
catatgattaaagcgcaaccgaagcagaaactggatctgtcaattcagacagaatatcca
gcgttgcaaacgattgtgtatcattcaaagaaaatcaacgcaatatttggtcctcttttc
agtgagcttacaaggcaattacttgacagtattgactcaagcagattcttgttctttacg
agaaagacaccggctcagatcgaagatttcttcggagatctagacagtcatgtcccaatg
gacgtacttgagttggatgtttcgaagtatgataagtctcaaaacgagtttcattgtgct
gttgagtacgaaatctggaggagactgggtctggaggatttcttggcagaagtgtggaaa
caagggcatagaaaaaccaccctgaaagattacactgctggtataaaaacgtgtttatgg
taccagagaaagagtggtgatgttacaacttttatcggtaataccgtcatcattgcttcg
tgtcttgcatcaatgctcccgatggaaaaattgataaaaggagccttctgcggagatgac
agtttgttgtactttcctaagggttgtgagtatcccgatatacaacaagctgccaatcta
atgtggaattttgaggccaaactgttcaagaagcaatatgggtacttctgcgggaggtac
gtgattcatcacgatagaggttgcatagtatactacgaccctttgaagctgatttcgaaa
cttggtgctaaacacatcaaggattgggatcatttggaggagttcagaagatccctctgt
gatgttgctgagtcgttgaacaattgcgcgtattacacacaattggacgacgctgttggg
gaggttcataaaaccgccccacctggttcgtttgtttataagagtttagttaagtatttg
tcagataaagttttgtttagaagtttatttcttgatggctctagttgttaa
DBGET
integrated database retrieval system
