Viruses: 921321
Help
Entry
921321 CDS
T40000
Symbol
ORF1, AcLVgp1
Name
(RefSeq) Carlavirus latensaconiti; polyprotein
KO
K26628
Betaflexiviridae RNA replication polyprotein
Virus
101764
Carlavirus latensaconiti
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Vmethyltransf
RdRP_2
Peptidase_C23
Viral_helicase1
2OG-FeII_Oxy
AAA_30
AAA_22
AAA_19
2OG-FeII_Oxy_2
AAA_16
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
921321
NCBI-ProteinID:
NP_116487
RS:
NC_002795
UniProt:
Q91UJ3
LinkDB
All DBs
Position
NC_002795:88..6048
Genome browser
AA seq
1986 aa
AA seq
DB search
MALTYRTPMEDIVISFEPQTQAVIAQSAAVIYQKLEESNCRYFNYYLTAIAKRKLSCAGI
YLSPYSAAVHSHPVCKTLENYILYDVLPHYVNSSYFFVGIKDRKLKLLKSRDRRLEGVQL
INRVVTCADKLRYSNELVQYNSLPHEGLEGHRIALEGDTLKRLVGPLLRHKAKHLFLHDE
LHYWSSDELCTFLEVMQPETMLATLVYPPELLFKQTKSLNEWCYTFEIIRNTFFFYPDGI
RSEGYQQPLNGGYLLSTNSIKLQDGTVYGVDILSSKFAHHLVALTRGKAVTSTHRSFGPF
EASTASGLSRICPSYPICLPIPCEVISKIYRYLRTLKKPDVQSANAKLSQIVAEPTGREI
TFVEEFAKFVIKTDSICTTFSFDEMEKFFRAVLGKLPAVFARQFASVRELGLHEFIEGLE
PFNFTTKLNVLNQGDIWQNLYKWLEDGSDCEDLPGLCDGTFMFGVKSGLRDRRAQPYHGT
IALSVQSCGALLVIPKDKLRNHLIGLYMRERCDGLTRKVSHSAVLAYCTERLAHSILLPK
VRRRGCSTTRLSTLEILGVCELTPLIRRIIRYVNCKSRTTFGESGIEWFLLHKTFRARTL
FLNSVPDAKRVVNPIAALWGMVVSEVVSSGCRWSHKTEEFCEPAPTRASFIMPPLKVNSV
ACAKDQLASTSSQMVAYSKVDDDELHIPFICKCGMSMPITDLVLPEHPFDSPDTLRNRRA
GWYSRGNISYSYNGGSHQSLGWSNYITTWCEVNGVEGKYDCCLYQVYEAEAAIGFHADDE
TIFEPGESVLTINLEGRASFGISCAKGDSFRVLNGPLQFTMPMGFQADHKHCVRGCTAGR
ASLTFRCLKRTQLPQAIEVSATKQSQSGDDSEESDDQKGADYSCPGVKYSEKGLPKDSNY
TTGESCPGPNSFWRSLSALTRYNLSEVKRLSLMHIFGDARCDQAIKLYQSTGTILGDSCI
AAAAIRLGATITIWNMELELQQIYAPESPRMALHLEYTAGMYKPIFLKNGCVIVAVAEAI
GRTNAEVQQVLNDCCCDGLLKEIWRGEGLQRNDMELVFKAFDIEAYVTENDDTRVYNASG
TLRKNFKLVNSHLSYESRAKDPCSTLLAGLVDSKCFPVEVLDSLRSKGFTRKYVIDSVRA
GMLADTFHKAQTGVLQSELFNKKTNLREHFRESHEVDVTVIVGIFGSGKSHIFKMMLDQA
RGKVFDFVSPRRALADAFTKLAGVKRGRRDRIKLGQENWRINTFEKFLDRTQFLHEGQVV
ILDEFQLYPPGYLDLIMSLIKVDVHLFLVGDPAQSDYDCEKDRLALQSLPDVASTVLLNV
TYPYNGLSLRFQNRNFLGRLPCNLDESTVTMDEPHELRAGLDVLERLEEHYSALVLVSSF
DEKTIVLSYLPKAQVLTFGESTGLTFDYGTILISGISERANERRWYTALSRFRKNICLVN
CTSSSYENLVVSYRKRALGKFLSQTANLDDLRVVLPGNPEFRNGFTERTGKDEGVREDKM
VGDPWLKTMINLYQGAEMQDEEIAEAIIQESWFKTHIPREELECVRARWVHKILAKEDRE
VRMGHMISEQFTDDYSKQAGGIRLTNAAERFETIYPRHRANDSVTFIMAVKKRLSFSNPA
RERAKLFNAQAFGRPLLKEFLKRVPLRPAHNHEFMARALWDFEEKKLGKSAATIENHSGR
SCRDWPADVAQIFSKSQLCTKFDNRFRVAKAAQSIVCFQHAVLCRFAPYMRYIEMKVHEA
LPKNYYIHSGKGLGELNDWVKRGKFQGVCTESDYEAFDASQDEYIMAFELELMRYLRIPG
DLIEDYKYIKTSLGSKLGNFAIMRFSGEASTFLFNTLANMLFTFMRYEIKGNEFICFAGD
DMCAPTHLQTTGRHKSFLDKLKLKAKVQFTGKPTFCGWHLCPDGIYKKPQLVLERMCIAR
ELNNLANCIDNYAIEVAFAYQLGEKALNRMDEEEVGAFYNCVRIIVRNRHLLKSDVRFIF
ERGLGD
NT seq
5961 nt
NT seq
+upstream
nt +downstream
nt
atggctctcacttacagaacgcctatggaggatattgttatctcatttgaaccccagaca
caagcagtaattgctcagagtgctgcagtcatctaccagaaattggaggaaagtaattgc
cggtacttcaactactacttaacagctattgccaagcggaagttgagttgcgccggtatt
tatttaagcccatattctgcggctgtgcactctcatccagtgtgcaaaacactggagaat
tacatcttgtacgatgtgttaccgcattatgtaaatagtagctatttctttgtaggcatt
aaagataggaaacttaagttacttaagtctagagatcgcaggctcgaaggtgtgcaactc
atcaatagagttgttacctgtgctgacaaattgcgctacagcaatgaactagttcagtac
aactccctcccacatgagggcctggaagggcaccgaatcgcccttgaaggcgatacatta
aagagactggtgggaccactcctccgacataaagcaaagcacctcttcctccacgatgag
ttacactattggagcagtgatgaattgtgcacatttttggaagtcatgcaacctgaaaca
atgctagccactttagtgtacccacctgaactcttattcaagcaaaccaagagcctcaat
gagtggtgttacaccttcgagataattagaaatactttttttttttaccctgatggcatc
cggagcgagggttaccaacagcccctgaatggtgggtacctgcttagtaccaacagcatc
aaacttcaagacggcaccgtctatggagtcgatatcttgagcagcaaatttgcacaccac
ttagtcgctctcactcgaggtaaggcggttacgagtacacaccgatcttttgggcctttt
gaagcttctacagcttctggtttatcgagaatttgcccaagctaccccatctgtctgcca
atcccgtgcgaggtcattagcaagatttacaggtacctgcgtaccttaaagaagccagac
gtgcagtctgcaaatgctaaattaagtcaaatcgtcgccgaacccacaggacgtgaaatc
acattcgttgaagaatttgccaaatttgtcatcaagacagattcaatctgcacaactttc
tctttcgacgaaatggagaagttcttccgagctgtgctcggtaagttgcctgcggtattt
gcacggcaattcgctagcgtacgcgagctgggattgcacgaattcatcgaggggctagag
cccttcaacttcacaacaaagctcaatgtgctcaaccagggtgatatctggcagaatctc
tacaagtggttggaagatgggagtgattgcgaggatctacccggcctgtgcgatggcaca
ttcatgttcggcgtcaaatctgggcttcgagatagacgtgcgcaaccgtaccacggcaca
atcgcgctctcagtgcaatcatgcggggccttgcttgtcatcccaaaggataaattgcgt
aatcacctgattggcctttacatgagggaacgttgtgatgggttaacccgaaaggtttca
cattctgctgtgctggcttactgtaccgaacgtctagcgcacagcatccttttaccaaaa
gtaagacgacgtggttgttctactacacgattgagtaccctcgagattctcggggtatgc
gagttgacgcctctaatcagacgcataatccgctacgtcaattgcaaatccagaacgacc
tttggtgaatcaggcatcgagtggttcttacttcacaaaacatttagggcccggacactc
ttcttaaattctgtacctgatgctaagagagtggtgaaccccatcgccgctctgtggggc
atggttgtttctgaagtggtctcttctggatgcagatggtctcacaaaactgaggaattc
tgtgaacctgcgcccactagagctagctttatcatgccacccctgaaggttaattcggta
gcttgcgcaaaagaccagctcgcgagtacatctagtcaaatggtcgcatacagtaaagtt
gatgatgatgaactgcatatacctttcatatgcaaatgtggcatgtcaatgcccatcact
gatctggtccttccagaacacccctttgattcacctgacactttacgcaatcggcgggca
ggctggtattctagggggaacatcagttattcgtacaacggtggttctcatcaaagtctg
ggttggtcaaattacatcacgacttggtgtgaggtgaatggtgttgaaggtaagtacgac
tgctgcctttatcaagtctatgaagcagaagcagcgattggctttcatgctgatgatgaa
acgatttttgagcccggcgagagcgtcctaacaatcaatttggaaggccgcgcatctttc
ggcatttcttgcgcaaaaggagatagcttccgagttcttaatggaccactgcagttcacc
atgcctatgggatttcaggctgatcacaaacattgtgtgcgtggttgtaccgctggacga
gctagcttgactttccgttgtctgaaacgcacacagctgcctcaagctattgaggtgagt
gctaccaaacaatcacaaagtggtgatgattctgaagaatcggacgatcaaaaaggcgcc
gactacagttgccctggtgttaagtattctgaaaagggcctcccgaaggattccaattac
acgacaggggaaagttgcccaggtcccaatagcttctggcgtagtctctctgcgctaaca
cgatacaacttgagcgaagtgaagagactgagcttaatgcacatttttggcgatgctaga
tgcgatcaagccattaagctctatcaatctacggggacgatcttgggcgattcgtgcata
gctgctgccgctatacgtctcggtgctactataaccatatggaacatggaattggaattg
cagcaaatctatgcccctgaaagcccacgcatggctctacaccttgaatatacggccggc
atgtacaaacctatcttcttgaagaatggatgtgtcatcgttgcggtggctgaggcgatc
gggcggaccaacgctgaagtgcaacaagtgctaaacgactgctgctgcgacgggctcctg
aaggagatatggcgtggcgagggattgcaacgcaatgatatggagttggtattcaaagct
tttgacattgaagcatatgttactgaaaatgatgataccagagtgtacaatgcttcgggt
acgcttcggaaaaacttcaaattggtgaattcccacttgagttacgaaagccgggccaag
gatccttgcagcacgcttttagctggcttggtggactcgaaatgtttccccgtggaagtt
ctagattccctacgctctaaaggttttaccaggaagtatgtgattgatagcgttagagct
gggatgcttgctgatacctttcataaagctcaaaccggcgtattgcagtctgaattattt
aataagaagactaacctgcgcgagcactttagagaatcacatgaggtagacgtgacagtt
attgtagggatctttggctccggcaagagtcatatcttcaaaatgatgttggatcaagcg
cggggcaaggtttttgacttcgtctcccctcggagggctttagctgatgcattcaccaaa
ttagcaggggttaaaagggggaggcgcgatcgcataaagctcgggcaagagaattggcgt
atcaacacatttgagaaattcctggatcgcacgcaattcttacacgaagggcaggtcgta
atcctcgatgaatttcaactgtatcccccggggtaccttgatctcattatgtctctgatc
aaagtggatgtgcacctctttctggtgggtgatcctgcgcaaagtgattatgattgtgag
aaagatcgcctggcactgcaatctctcccagatgtcgcaagtactgtgttactgaatgtc
acctacccttataacggattgagtctccgttttcagaaccgcaattttttgggcaggttg
ccatgcaatttggatgagagcacggtgaccatggatgagccacacgagttacgagcaggc
ctcgacgtgcttgaacggttggaggaacactacagcgcactcgtgctcgtcagttcattc
gatgaaaaaacaattgtcttgagctacctaccaaaggcgcaagtgctgaccttcggggag
agtactggtttaacttttgattacggcacgatcctgatttctggcatatctgaacgagcc
aatgaacgtcgatggtacactgcattgagtcgattccggaagaacatctgtctagtgaac
tgtacaagttcgagctacgaaaatctagttgtctcctacaggaaaagggcacttggcaaa
tttctcagccagacagccaatctagacgatctaagagttgtgctccctggtaatcctgag
ttcagaaatggtttcacagaaaggacaggtaaggacgagggggtacgcgaggataaaatg
gtaggtgacccatggcttaagacgatgataaatctgtaccaaggagcggagatgcaggac
gaggagatagctgaagcaataatacaggaatcatggttcaaaacccacataccccgtgag
gagttggaatgcgttcgcgcgcgctgggtgcataaaatccttgctaaagaggatcgtgag
gtgcgcatggggcatatgatctccgaacaatttacggatgattacagtaaacaggctgga
ggcattaggctcacaaacgctgctgaacgctttgagacgatctatcctagacatcgcgcc
aacgacagcgtcactttcatcatggcagttaagaagcgtttgagtttctctaaccccgcc
agggagcgagctaagctctttaacgctcaagcttttgggagaccacttctgaaggaattc
ctcaagcgtgtgccgttgcgtcccgcgcataatcacgaatttatggcgagagctttgtgg
gatttcgaagagaagaaactgggtaaaagcgccgccacaatcgagaatcatagtggacgt
tcgtgccgcgattggcctgctgatgtggcccaaattttctctaagagtcaactatgtact
aaattcgacaacaggtttagagtagccaaggctgctcagagcatcgtgtgtttccaacac
gcagttctttgcagattcgccccatatatgaggtacattgagatgaaggtgcacgaggcc
ttaccaaagaattactacatacactctggtaaggggctgggcgaattaaacgactgggtc
aagcgcggaaaattccaaggagtgtgcactgaatccgattatgaggctttcgatgcgtcg
caagatgagtacatcatggcttttgaattggagctgatgaggtatttgcgtattcctgga
gatctcattgaggattataaatacattaagaccagtcttggttctaaactgggaaatttt
gcaataatgaggttctctggtgaagcaagtacattcctgttcaatacgctcgcgaatatg
ctgttcactttcatgcgttatgaaatcaagggaaatgagttcatttgctttgccggcgat
gacatgtgcgcgcccacacatctgcagacaacagggaggcacaaatcatttttagataag
cttaaattgaaagcgaaggtgcagtttacgggcaaaccaacgttctgcggttggcatctg
tgccctgatggaatctacaaaaaaccacagcttgtacttgaacgcatgtgcattgcaaga
gaattgaacaatctagctaactgtattgacaactacgctatcgaggttgcatttgcgtat
cagttgggggaaaaggcgctcaatcgcatggatgaagaagaagtgggggctttttacaat
tgtgtgaggattattgtgaggaataggcacctcctcaaatcggacgttcgtttcatcttt
gaacgtgggctcggggattaa
DBGET
integrated database retrieval system
