Viruses: 922105
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Entry
922105 CDS
T40000
Symbol
Icrvgp1
Name
(RefSeq) Indian citrus ringspot virus; putative RNA-dependent RNA polymerase RdRp
KO
K26615
Alphaflexiviridae RNA-directed RNA polymerase
Virus
104664
Indian citrus ringspot virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Vmethyltransf
Viral_helicase1
RdRP_2
2OG-FeII_Oxy_2
AAA_16
DAP3
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
922105
NCBI-ProteinID:
NP_203553
RS:
NC_003093
UniProt:
Q918W3
LinkDB
All DBs
Position
NC_003093:79..5055
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AA seq
1658 aa
AA seq
DB search
MATIRGAIDRITDTTVRTTLQEEACRQIRTELKNVEHVNRYAIPPDAADALEHLGIGTNP
FSVKLHTHGACKAIENQLLYVVGTLLPKERVTMLFLKKAKLNFMKRCPKFQDIFLNQHIE
PRDVSRYCDFNVQSTSTSIPTHTAYISDTLHFMDRKDLVRLFINSPNLDTLYATIVLPVE
AAYRQPSRYPDLYQINYDFDGFQYIPGGHGGGAYHHEFSHLEWLDVGHIHWRGPDNKDIQ
LTITAQMIESLGANHLFCFRRGNLRTPRVRTFGRDTQVLLPKIFRPVDKNFNRAIPLTLA
NKMLLYAKSINTVTFRDVVAKTRQLMKDKELETYTGADLLHMANYFFVVGALSGVNSYDQ
MLGLSAWEACTMALKNTVTNLWERITGKREFGKLLEALEWETLTYSRQVTQKYVGGTPAR
LPLPDITDQEEIFAQQEALDALTSGATKITTHHLMSAAARRSTEGPTMPTPAAQVPPTQN
PKHTIDEVASRALVTKLQKNKRVYIQDDGPEYIMGHMAEVPAWYLEQDETTTRLRNRCAW
FFGPPTHRYGHNDIEYHTTEYYPWVERIGNIFGKFNTCLAQTHDQGARIGYHADDEDCYD
KDVTVATVNLTGNATFSLKTATGTRTWKLKPGDFIVLKPGAQGCTKHAISDCTTNRTSLT
FRWQARPCPSQLRRVVNLGNVNNPKRKSKAQQWTPKTSNSDSPRLTQTPNSPTPKDVPVV
SPKLADATAPTIRAVPENGAHTNMACVELTDLPETTTTHRPGKEPINDLTDSEPETESEQ
TENLVLNRFIQDLPTTSTHAWASETDSICSFQAEALGPSSVEALPWHEHLELINSLGFTG
LERQYGPDNNLIWPITHYRTLPKSRTIEAPTDLVELLDTIDRHPTDVPYSKTRASAFGSD
VKNLRIGALVKNQDKQWRASLALLCEENEHVLPTTVIHGAGGSGKSHLLQQWVSSTERGN
VVVILPTIELLRDWLNKCPTTPKDSFKTFEKALVQNSAPVVIMDDYSKLPPGYIEAYVAL
KGQCKLLVLTGDPRQSHYHEENPEALISTLDPATDYFSKYCTYNINATHRNATTFANALG
VYSERKLPVSVTCSSYQKSGWPTLVPSILKKTALNDMGQRSLTYAGCQGLTTPKVQIVLD
NATPLCSEQVMYTALSRAVDQIHFFNTGPNHSDYWEKMNATPFLKTFIDHTREENLKEHQ
PAEPTVREHTPATHFPPANEALALEPWVEPLTDKHSRELHHKALGHSNCVQTDNPVVQLF
PHQQAKDETLFWKTIDARIKITTPEENVRNFNMASDIGDILFLNYKEAMCLPADPIPFQQ
SLWDSCQAEVQQTYLSKPLAALANAAQRQDPDFDSNKIQLFLKSQWVKKVEKLGCLKIKP
GQTIASFMQQTVMLYGTMARYMRRIRISLCPSHIMINCETNPTQISSWVRENWDFSGQSH
ENDFEAFDQSQDANMLQFELIKAKFHSIPEEIIAGYKHLKCHAHIFLGTIAIMRLSGEGP
TFDANTECSIAYNHTRYFVPKGCAQLYAGDDSACAAPLSEKPSFQHISPELSLKSKAKIR
SQTKGDYATFCGWLITPKGFIKNPTQLYASWLLAKHNKDLQDVARNYALDLRIAYQLKDE
LYELLSPEELDHHQLLVREMVKHKMGHLLNLPEGFKQT
NT seq
4977 nt
NT seq
+upstream
nt +downstream
nt
atggccactattaggggtgccatcgatcgtatcacagacaccaccgtacgcacgacacta
caggaggaggcttgcagacaaatccgtaccgaacttaagaacgtagaacatgttaacagg
tacgccatcccgccagatgccgcagacgccctagaacatcttggcattggcaccaacccc
ttctcggtcaaattgcatacacacggtgcctgtaaagcgatcgaaaaccagctactctac
gtagttggtactttgctaccaaaagaaagagtcaccatgctcttccttaagaaagctaag
ctcaacttcatgaagagatgcccgaagttccaagacatcttcctaaatcagcacatagaa
cctagggacgtctcaagatactgcgatttcaacgtgcaatccacatccactagcattcct
acccatacggcatacatcagcgatacactacatttcatggataggaaggacttagtaagg
ctcttcatcaacagtcctaacttagacaccctctatgccaccatcgtactacccgtggag
gccgcataccgccaaccgagtcggtatcccgacctatatcaaatcaactatgacttcgac
ggtttccagtacatccctggtggccatgggggtggtgcctaccaccacgaattcagccac
ctcgagtggttggacgtaggccacatacactggcgtggaccagacaataaggacattcaa
ctcacaataaccgcgcagatgattgaaagccttggggcaaatcacctgttttgcttccgg
agaggcaacttacgcacacccagagttaggaccttcggccgagacacacaagttctgctc
cctaaaatattccgcccggtcgacaaaaacttcaatagagccataccactcactctggct
aataaaatgctactttacgccaaatcaatcaacacggtcacattccgtgatgttgtagca
aaaacccgccagctcatgaaagataaggagctggagacatacaccggcgccgacctactt
catatggctaactacttcttcgtcgtcggcgccctatctggagtcaactcttacgaccaa
atgctggggctctcagcatgggaagcatgcaccatggccctcaaaaacacggttaccaac
ctctgggagcgcatcactggaaaaagagagttcggaaagcttctcgaggcactcgagtgg
gagaccctcacctactctcgccaagtaacccagaaatacgtaggtggcacgcccgcacga
cttccactgcccgacatcactgatcaagaagagattttcgctcaacaggaggccctagac
gcactcacgtcaggcgcgactaagatcaccacacaccacttgatgagtgcggcagcccga
cgcagcaccgagggccccacaatgcccaccccagccgcccaagttccccctactcaaaat
ccaaaacacaccatcgatgaggtggcatcacgcgctctcgtaacaaaactacaaaagaac
aagcgcgtctacatacaagatgacggtccagagtatatcatgggccacatggctgaagta
cctgcctggtacctagaacaagatgaaaccactacgagactacgcaaccgttgcgcctgg
ttcttcggaccacccacccaccggtatggacataatgacattgagtaccacacaacagaa
tactacccgtgggtggaacgcatcggcaacatatttggaaagttcaacacatgcctcgcg
caaactcatgaccagggcgcccggataggctaccacgctgacgacgaagattgctatgac
aaagacgtaaccgtggccacagtgaaccttacaggtaatgccaccttttctctcaagaca
gctacaggcacccgtacatggaaattgaagccgggcgattttatcgttctcaaacctggc
gctcaagggtgcaccaaacatgccatcagtgactgcacaaccaaccgcacttccttaaca
ttcagatggcaagctcgaccatgtccgagccagctacgccgagtggtcaaccttggaaat
gtcaacaaccccaagaggaaatctaaagcgcaacaatggaccccaaaaaccagcaactca
gatagcccaagactgactcagaccccaaatagcccaacacccaaggatgtgccggtcgta
agcccaaaactcgctgacgctaccgcaccgacgattagggccgtgcccgaaaacggtgcc
cacaccaacatggcgtgtgtagagcttacggacctgcccgaaaccaccactacccatcgc
ccgggcaaagagccaattaatgacctcacagactcagaacccgagactgagtccgaacaa
actgaaaaccttgtgctcaaccgcttcatacaggacttgcccaccacctccactcacgcg
tgggcctctgaaaccgactccatctgcagcttccaggccgaggctcttggtccatcttct
gtcgaagccctaccatggcatgaacatctcgagttaataaactctctaggcttcactggt
cttgaacgccaatacggcccagacaacaatctcatctggcccattacccactaccgcaca
ctcccaaaatccagaaccattgaggcacccactgacctggttgaactcctcgacaccatt
gaccgacatcccaccgacgtcccttactccaagacgcgagcgtcagctttcggctctgac
gttaagaaccttcgtatcggagcgttggtcaagaaccaggataaacaatggagggcgtct
ctcgcactcctctgtgaggaaaacgaacacgtcctgcccaccactgtcatacacggcgca
ggtggttctggaaaatcccacctcctccaacaatgggtctcctccactgaacgcggcaac
gtcgtcgtcattcttccgacgattgaactacttcgagattggctcaacaagtgccccact
acaccgaaagacagctttaagaccttcgaaaaagctcttgtgcaaaacagtgcccccgta
gtcataatggacgactactccaaattgccgcctggctatatcgaagcttacgtagcactc
aagggccaatgcaagctgctcgtcctcaccggagacccacgccaaagccactatcatgaa
gaaaacccagaagctctcatttcgaccctagaccctgcaaccgattacttctccaaatac
tgcacctacaatatcaacgccacacaccgaaacgccaccaccttcgcaaacgccctcggc
gtttactctgagagaaagttgccagtgtcggtaacttgttcgtcttatcagaagagcggg
tggcccacactcgtcccatcaatcctcaagaaaaccgcactcaatgatatgggacaacgc
tccttgacctatgccggctgtcagggcctcacaactcccaaggttcaaattgtactggac
aacgccactccactctgctctgagcaggtgatgtacaccgctctctctcgtgccgtcgac
cagatacacttctttaacacaggcccaaaccactcagactattgggaaaagatgaacgcc
acccctttcctcaagaccttcatagaccacacccgcgaagagaacctcaaagaacaccag
cccgcagagcccaccgtcagagaacacacccccgccacacactttccaccagccaacgaa
gctctagcacttgaaccctgggttgaacccctcacagacaaacactcacgagaattgcac
cacaaggcgctgggtcacagcaactgcgtgcaaaccgataacccagtggtacaactcttc
ccccaccaacaagccaaggacgaaaccctcttctggaaaactatcgacgctcgaatcaaa
atcacgacaccggaagagaacgtccgtaacttcaacatggcctccgacatcggagacatt
cttttcctgaactacaaggaagccatgtgcttacctgccgaccccatccccttccaacag
tctctttgggacagttgccaggctgaggtgcaacagacttacctcagcaaacctcttgca
gcacttgccaacgctgcccagcggcaagatccagacttcgactccaacaagattcaatta
ttcctaaagtctcaatgggtcaagaaggtggaaaaacttggctgcctcaagattaagcca
ggacagaccatcgcctcattcatgcaacaaacggtcatgctctatggcactatggcgcga
tacatgcgcaggatccgtatctctctttgtccctcacacatcatgataaactgcgagacc
aaccctacccaaataagctcttgggtacgagagaattgggacttttccggacaaagccac
gagaacgactttgaggcttttgaccaatcacaggacgcgaacatgctgcaattcgagctg
atcaaggcaaaattccactccattcctgaggagatcatcgctggatacaaacacctaaaa
tgccatgcacacatctttctaggcaccatcgctatcatgcgcctgtccggagagggcccc
actttcgacgcaaacactgagtgctccatcgcttataaccacaccaggtacttcgtccct
aagggttgtgctcaactttacgctggcgacgactcggcctgtgctgctccactctctgaa
aaacccagcttccaacacatctcacctgagctgagcttgaaatcaaaagctaaaatccga
agccagactaaaggagactatgccactttctgtggttggctaatcactcccaaaggtttc
atcaagaacccaactcagctctatgcctcctggctactggccaaacacaacaaagatcta
caggacgttgcgcgcaactacgcccttgacctccggatagcataccaactcaaagacgaa
ctttacgagctgctatcccccgaggagctagatcaccaccaactcttagtccgcgagatg
gtcaaacacaaaatgggacacctcttaaacctccctgaggggtttaaacaaacctaa
DBGET
integrated database retrieval system
