Viruses: 935429
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Entry
935429 CDS
T40000
Symbol
CERVgp5
Name
(RefSeq) Carnation etched ring virus; Enzymatic polyprotein [Contains: Aspartic protease; Endonuclease; Reverse transcriptase]
Virus
10640
Carnation etched ring virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Peptidase_A3
RVT_1
RT_RNaseH
RT_RNaseH_2
Motif
Other DBs
NCBI-GeneID:
935429
NCBI-ProteinID:
NP_612577
RS:
NC_003498
UniProt:
P05400
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All DBs
Position
NC_003498:3353..5332
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AA seq
659 aa
AA seq
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MSLRNRTNPNSIYVKGILKFPGYQTNLDLHCYVDTGSSLCMASKYVIPEEYWQTAEKPLN
IKIANGKIIQLTKVCSKLPIRLGGERFLIPTLFQQESGIDLLLGNNFCQLYSPFIQYTDR
IYFHLNKQSVIIGKITKAYQYGVKGFLESMKKKSKVNRPEPINITSNQHLFLEEGGNHVD
EMLYEIQISKFSAIEEMLERVSSENPIDPEKSKQWMTATIELIDPKTVVKVKPMSYSPSD
REEFDRQIKELLELKVIKPSKSTHMSPAFLVENEAERRRGKKRMVVNYKAMNKATKGDAH
NLPNKDELLTLVRGKKIYSSFDCKSGLWQVLLDKESQLLTAFTCPQGHYQWNVVPFGLKQ
APSIFPKTYANSHSNQYSKYCCVYVDDILVFSNTGRKEHYIHVLNILRRCEKLGIILSKK
KAQLFKEKINFLGLEIDQGTHCPQNHILEHIHKFPDRIEDKKQLQRFLGILTYASDYIPK
LASIRKPLQSKLKEDSTWTWNDTDSQYMAKIKKNLKSFPKLYHPEPNDKLVIETDASEEF
WGGILKAIHNSHEYICRYASGSFKAAERNYHSNEKELLAVIRVIKKFSIYLTPSRFLIRT
DNKNFTHFVNINLKGDRKQGRLVRWQMWLSQYDFDVEHIAGTKNVFADFLQENTLTNYV
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttagaaataggacaaaccccaattccatttatgtcaaaggaattctcaaattc
cctggctaccaaaccaacctcgacctacactgttatgtagacactggctcaagtttgtgt
atggcaagtaagtatgtcataccagaagaatattggcagactgctgaaaaacctctcaat
attaagatcgccaatggtaagatcatacaattgacaaaggtttgtagcaaactaccaata
cgtttgggaggagaacgatttctcattccaacattattccagcaggaaagcggaatagat
ttattgcttggaaacaatttctgtcagttatactcacctttcatccagtatactgatcga
atttactttcatcttaacaagcaaagcgttatcataggaaagataacaaaagcataccaa
tatggtgtcaaaggattccttgaatccatgaaaaagaagtctaaagttaataggcctgaa
ccaattaacataacttctaatcaacatctctttttagaagagggggggaatcatgtagat
gaaatgctatatgaaatccaaattagcaaattttcagccattgaagaaatgctagaaaga
gttagttctgaaaatcctatagacccagaaaagtctaagcaatggatgacagcaaccata
gaactcatagatcctaagacagtagtaaaggtcaaacctatgagctacagtcctagtgat
agagaagaatttgataggcaaatcaaagaacttcttgagcttaaggtcatcaaacctagc
aaatccacccatatgtccccagccttccttgttgaaaatgaagcagagagacgtagagga
aagaaaagaatggtcgtcaactacaaggctatgaataaagccacaaaaggagacgctcat
aatcttccaaacaaggatgaattactcacccttgtaagaggaaagaagatttacagctca
tttgactgtaagtcaggattgtggcaagttctgctagataaagaatcgcagcttttaacc
gcgtttacttgtccacaaggtcattaccaatggaacgtagtacctttcggtttaaagcaa
gcaccaagcatctttccaaagacatatgcaaacagccattccaatcaatattctaaatat
tgttgtgtctatgtagatgacatcctagtgtttagtaacacaggaaggaaggaacattac
attcatgttcttaacattttgagaagatgtgaaaaacttggaataatactctccaagaag
aaagcacaactcttcaaagaaaagattaatttcttaggattagaaattgatcaaggaacc
cattgtcctcaaaaccatatcttagaacatattcataagttcccagataggatagaagac
aaaaagcagttgcagagatttctaggaattctcacatacgcatctgattatattccgaag
ctagcctctattaggaaacccttacagagtaagcttaaagaagattcaacatggacttgg
aatgatactgattctcagtatatggctaagatcaaaaagaatcttaagagttttccaaaa
ctctaccaccctgaacctaacgacaaattagttatcgaaactgatgcatctgaagagttc
tggggcggaattctaaaggctattcacaatagtcatgagtatatctgtcgatatgcttca
ggcagtttcaaagccgccgaaagaaattaccatagcaacgagaaagagcttctcgcagtt
atcagagtaattaaaaaattcagtatttatctaaccccttcgaggtttttgattcgtact
gataataaaaacttcacccattttgttaatataaacttaaaaggtgatagaaaacaaggt
cggctggtacgatggcaaatgtggttatctcaatatgattttgatgtagaacatattgca
ggtacaaagaatgtctttgcagattttctacaagagaatactctaactaattatgtttag
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