Viruses: 935434
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Entry
935434 CDS
T40000
Symbol
BlScVgp1
Name
(RefSeq) Blueberry scorch virus; polyprotein
KO
K26628
Betaflexiviridae RNA replication polyprotein
Virus
31722
Blueberry scorch virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Vmethyltransf
RdRP_2
Peptidase_C23
Viral_helicase1
2OG-FeII_Oxy
AAA_22
2OG-FeII_Oxy_2
ATPase_2
AAA_14
AAA_5
AAA_19
Motif
Other DBs
NCBI-GeneID:
935434
NCBI-ProteinID:
NP_612579
RS:
NC_003499
UniProt:
Q65652
LinkDB
All DBs
Position
NC_003499:59..5962
Genome browser
AA seq
1967 aa
AA seq
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MALTYRSPVEEVLTLFEPTAQSLIASAAVSAFQRHEKDNFEWFRYSVPAFAKEHLSKAGI
YLSPYAGFPHSHPVCKTLENYILYVVVPSIVNSTFFFVGIKDFKINFLKSRFDKLNMISA
LNRYVSSADKIRYGNDFVIRAGVEHRALKRHRGLVDSPTLKALMPNVKSGSKLFLHDELH
YWSKEELIGFLEICEPEVLLGTVIYPPELLIGSDCSLNPWCYEYEVKKKKLLFYPDGVRS
EGYEQPLSGGYLLQTSRIKLPNAGIYCVDLLCSRFAHHLFSITRGDLITPDNRSFGPFEA
VHSGALAGISRGKPNFYPVSQHTILRVYRYLRSLKKPDKQSAMAKFSQIVHEPCGRAVKF
MEEFSDLIINTGTLRTVINPEQVKLFFGNLGRCMPPCFASKLKGTRTVCLDEFISMLRPL
SVDVTLETISMHSMTMVVTTWSQEAEEGVDLPKIFEEKWEGKQSLDRTEAPYLGLAPFVD
YKIQWRLQFNIPKFLNQLAELFVNSCSVNGGVRSMSIPAYLRRLATCRSCVGRAMLCCLT
EVDIASLRVVVRNRYPYTEDFYRCRRRWFLRIGAQRRPSFYIEDAKHLERLGQFEEEQFQ
RPMSRRSLYTLASVSMNGTDDPFCSDCFYDPVPVARAKIVPTPTVIVERALEPLAIDTGT
TSDAPCDAPGATCLRGAQAVVCACGLSMAVSAVPYAELKMDFYPDALKGRDAAWYSKEDR
EYKYNGGSHLCRGWPKWLQLWMQANGVDETYDCMLAQRYGAQGKIGFHADNEEIFMRGAP
VHTVSMDGNADFGTECAAGRQYTTLRGNVQFTMPSGFQETHKHAVRNTTAGRVSYTFRRL
AKKDESRVIEEVVEVETKDMGFSSSLFGVQIIVDEPCDGVEETFNVQCVPGDGNCFWHSL
GSFTGLTVECMKAGIKNFACGPEGAEKLSRQLEPNVWAEDEALCAACAHLGVDLVIFDED
QGFKMLYRYPGNKREALLRLKGSHFEPLEPKEMCVVKAIAQAVKRSPMDVLRVALKKMGE
DFKEQICRGKGVMLDVFMVLAKIFDVSACVLQGTEQIMINPKGRIKGLFRMTTDHLSYDG
VPDKVKHSEVNVYKHDVALQIEDLIELRELSSLVEYTPSFSRAKLLADCLHDGSTGVMCS
ELYNDKGHLCPEGRETTRVTIGVLLGTFGCGKSRLFKEILFKLCGKSVCYISPRKALCDS
FDDEIRKARGNMGERGIKHYKSLTFEKAILQASKLHKGSLVIIDEIQLYPPGYLDLLLLL
AGPTMKYFALGDPCQSDYDSEKDRTILGSVRSDVFELLDGIEYKFNILSRRFQSSLFRGR
LPCLMYEEDLEAGAPLRLIDGLESIDTSAAYSRCCLVSSFEEKKIVNAYFGERTKCLTFG
ESTGMTFDVGCVLITSISAHTSEQRWITALSRFRKDIVFVNAASVAWDTLQSVYANRWLG
RFLNRSARQEDLRRMLPGTPLFVEGFQKNLLGADEGKRECKLEGDPWLKTMVDLLQVEDM
EDIEIAKEVLQDEWCKTHLPQCELESVRARWVHKILAKEFREKRMGCLVSEQFTDQHSKQ
MGKHLTNSAERFETIYPRHRAADTVTFIMAVRKRLSFSCPIKESAKLNQALPYGPFLLKE
FLKRVPLKPMHDRKMMEQAKFDFEEKKTSKSAATIENHSNRSCRDWLIDVGLVFSKSQLC
TKFDNRFRDAKRAQTIVCFQHAVLCRFAPYMRYIEKKLNEVLPSKYYIHSGKGLEELNRW
VIEGRFEGVCTESDYEAFDASQDHYIVAFEICLMRYLGLPNDLIEDYKFIKTHLGSKLGN
FAIMRFSGEASTFLFNTMANMLFTFLQYDLKGNERICFAGDDMCANGRLHVSSKHKNFMS
KLKLKAKVSNTMNPTFCGWNLSSDGIFKKPQLVLERLCIAKETNNLANCIDNYAIEVSFA
YLMGERAKQRMDEEEVEAFYNCVRIIVKSKHLLKSDVATIYQTARVD
NT seq
5904 nt
NT seq
+upstream
nt +downstream
nt
atggcactcacatacagaagtccagtcgaggaagtgttaacacttttcgagcccacagct
caatcactaatcgccagtgcagcagtctcagccttccagagacatgagaaggataacttc
gaatggttccgctacagtgtacctgcttttgctaaggagcaccttagcaaggcgggaata
tacctcagcccatacgcaggttttccgcattctcatcccgtctgcaagacattagagaat
tatatcttgtatgtagtagtacctagtatagttaatagtacctttttttttgttggcatt
aaggattttaaaatcaatttcttgaagagtagattcgataagttaaatatgataagcgct
ttgaataggtatgtcagtagcgcagataaaattaggtatggtaatgatttcgtcattcgc
gctggtgtggaacatcgtgcattgaagaggcatagaggcttagttgattcacctacactg
aaggcgctgatgcccaatgtgaagagtggttctaaattgttcttgcatgatgaattacat
tattggagcaaggaagaactaattggcttccttgagatctgtgagccagaggttcttttg
ggcacagtaatttacccgccagaattgttgatcggttccgattgctcgctcaatccgtgg
tgctacgagtacgaggtgaagaagaagaaattattattctaccctgatggcgtgaggagt
gaaggctatgaacaacctttgagtggaggttatctactgcaaacgtctcgaatcaagttg
cccaatgcgggcatttactgcgttgatctgctctgcagtcgttttgcgcaccacctcttt
tccataactagaggggacttgatcacacctgacaaccgctcttttgggccattcgaggca
gttcatagtggtgctttagctggtatctcacgtggaaaacccaacttctaccctgtgtct
cagcacactatactccgtgtgtacaggtatctccgttctttaaagaagccggataagcaa
tctgccatggctaaattctctcagattgtgcacgaaccatgtgggcgagccgtgaaattc
atggaagaattcagtgatttaatcatcaacactggaacattgcgcactgtgattaaccca
gagcaggttaaacttttttttgggaatttaggccgctgtatgccaccctgctttgcttct
aagcttaaaggaactcgcacggtttgcttggatgagttcattagcatgttgagacccttg
agtgtcgacgtgactctcgaaacaatttctatgcactctatgacaatggtggtgacaacg
tggtcacaagaagcagaagagggtgtggacctaccaaagatttttgaagagaagtgggaa
ggaaagcaatctttggatcgcaccgaagcaccttacttgggtctagcaccgtttgttgat
tacaagatccagtggcgtctgcagttcaatatacccaagtttttaaatcagctagctgag
ctgtttgtcaactcttgcagtgttaacggaggtgtgaggtcaatgtccatacctgcatac
ttgaggagactcgcaacttgccgcagttgtgtcgggagggcaatgctgtgctgcctaact
gaggtggacattgctagtttgagggtggttgtgcgtaaccgatacccgtacactgaggac
ttttacagatgtagaagacgttggttcctgcgcatcggcgctcaacgtcgcccgtccttt
tacattgaagatgcaaagcatctggaacgactagggcagttcgaagaggagcagttccag
cgtccaatgagtaggaggagcctctacacgcttgcgagcgtctctatgaatggcacagat
gatcctttctgctccgattgtttctatgatccagttccagttgcgcgtgcgaagatagtg
cccactccgacggtgatagtggaaagagccctggagcctttggctatcgatacgggaaca
acttctgatgcaccttgcgatgcacctggtgctacgtgcctaagaggtgcacaagccgta
gtgtgtgcttgtggcttgtccatggcggtgagcgctgtgccttatgctgagctcaaaatg
gacttttatcccgatgctttgaaaggtagagacgctgcttggtactccaaggaggacagg
gagtacaaatacaatgggggttcgcatctatgtaggggttggcccaaatggttacagttg
tggatgcaggccaatggcgttgatgaaacctacgattgtatgttggcgcagcggtacggc
gcacaagggaagatcgggttccatgcagataacgaagaaatttttatgcgaggggcacca
gtgcacaccgtgagtatggatggtaatgctgattttggcactgagtgcgctgcgggcagg
cagtacaccacattgcgcggtaatgttcagttcaccatgccaagtggtttccaggagacc
cataaacatgcggtgcggaacacgacagctggtagggtatcgtacacatttagacggctt
gcgaagaaggacgagtcgcgcgtaatagaggaggttgtggaggtggagaccaaggatatg
ggctttagttcatcactctttggtgttcaaattattgtggatgagccgtgtgatggcgtt
gaggagaccttcaatgttcagtgtgtgccgggtgatggaaactgtttctggcactctttg
ggctcattcactggtttaacggttgagtgcatgaaggcaggcatcaagaattttgcatgt
gggccagaaggagctgagaaattgagtaggcaattggagccaaatgtgtgggcggaggat
gaagctttgtgcgcagcttgtgcacatctaggagtagacctagtcatttttgatgaggat
caaggcttcaagatgctttatcgctatcctggcaataagcgtgaggcgctacttcgttta
aaagggagccatttcgaaccattggagccgaaagagatgtgcgttgtgaaggccattgcg
caggcagtgaagcggtctccgatggatgttctacgtgtcgcgctaaagaaaatgggcgaa
gattttaaagaacaaatctgcaggggtaagggagttatgctggatgtgttcatggttctt
gccaagatctttgatgttagtgcttgcgtgttgcaggggacggagcagatcatgattaat
cccaagggtaggataaagggccttttcaggatgacgactgatcatctgagttatgacggt
gtacccgataaggtcaagcacagtgaggtcaacgtttataagcacgatgttgctctccaa
atcgaggacttaattgaattgcgtgagttgagcagtctcgttgaatacacgccgagcttt
tctagagctaagttgttagctgactgccttcatgatggctcgaccggtgtcatgtgctca
gagttgtataatgataaaggccacttgtgccctgaggggagagaaaccacacgggtgacg
attggggtgctacttgggacatttggatgtggcaagagccggctatttaaggagattctt
ttcaagctgtgcggcaagtcggtgtgctatatatcaccacgcaaggcactgtgcgattcc
tttgatgatgaaatcagaaaggcgcgtggcaacatgggtgaacgcggtataaagcactac
aagagtttgacctttgagaaagccatcctgcaagcgagtaaacttcacaaaggttctctt
gtgataattgatgagatacagttgtacccaccaggttacctcgacctactcttattactc
gcagggcctaccatgaagtactttgcactcggggatccatgccagagtgattatgactcg
gaaaaagatcgtacgatcttgggcagtgtaaggtctgatgttttcgaactattggatggg
attgagtataagtttaacatcttgagcagaaggtttcagagttcactcttccgtggaagg
ctcccgtgcttgatgtatgaagaagatctcgaggctggtgcaccgctgcgactgatcgac
ggcttggaatcaattgatacttctgctgcctactcgagatgctgcctcgtttcttcgttc
gaggagaaaaagattgtcaacgcgtactttggcgagcgaacgaagtgcctgacgtttggt
gagagcactggcatgacgtttgatgttgggtgcgtgttaatcacctcgatctcagcacac
acaagtgaacagcggtggattactgcactcagtcgctttaggaaggatattgtgtttgtg
aacgctgcgagcgtagcttgggatactttacagtccgtttatgcgaataggtggcttggc
cggtttttgaatcgctcagcaaggcaggaagatctgcgccgcatgttacctggtactcct
ctttttgtagagggctttcagaagaatttgctaggagcagacgaaggtaaacgtgaatgc
aagcttgagggtgatccctggctaaagactatggttgatttactgcaagttgaggacatg
gaggatatcgaaatagctaaggaggtgcttcaggatgagtggtgcaaaacgcatttgcca
cagtgcgaacttgaatcggtgcgtgcacgctgggtgcacaagatcttggccaaggagttc
agggagaaaaggatgggttgtttagtgtcggagcagttcactgatcagcattctaagcag
atggggaagcacctaacgaacagtgccgagcggtttgagaccatatatcctaggcatcga
gcagcggacaccgtgactttcatcatggctgtacgtaaacgtctgagtttctcatgtcca
atcaaagaaagtgcgaagttgaatcaggcgctgccatacggcccctttttgcttaaggag
ttcttgaaacgtgtacctctcaagccaatgcatgacaggaagatgatggagcaggccaag
tttgatttcgaggagaagaaaactagcaagagtgcagcaaccattgagaatcacagtaat
agatcatgcagggattggctgattgacgtggggctggtcttttcaaagtctcaattatgc
accaaatttgacaatcggtttagggatgcgaaacgtgcacaaaccattgtatgcttccag
cacgcggtcctatgtcgatttgctccctacatgcgctacatagagaagaagttgaatgag
gtgctgccgtcaaagtattacatacactctggaaaagggcttgaggaactcaacaggtgg
gtgatcgagggccgttttgagggcgtttgcactgagtcagattatgaggcctttgacgca
tcgcaagatcattacattgtcgctttcgagatatgcttgatgcgctatcttggtttgccg
aacgatctcatagaggattacaaattcattaaaacccatttgggctcaaaattgggtaat
tttgcgatcatgagattttctggtgaggcaagcacttttctattcaacactatggcgaat
atgctgttcacgttcttgcagtacgatttgaagggtaatgagcgaatctgctttgcaggt
gatgatatgtgcgcaaatgggcgtttgcatgtttccagtaagcacaagaactttatgagc
aaattgaagttgaaggcgaaggtaagcaataccatgaatcccaccttttgcggatggaat
ctatctagtgatgggattttcaagaagccccagcttgtacttgagagactgtgcatagcc
aaggagacgaacaacctcgcaaattgcattgacaattatgccattgaggtgtcttttgct
tatctcatgggggagcgagccaagcagcgaatggacgaagaagaggttgaagccttttac
aattgcgtccgcattattgtcaagagcaagcaccttctcaagtcggatgttgctactata
taccagacggctcgggttgattag
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integrated database retrieval system
