Viruses: 935900
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Entry
935900 CDS
T40000
Symbol
CymRSVgp1
Name
(RefSeq) Cymbidium ringspot virus; RNA-dependent RNA polymerase
Virus
12144
Cymbidium ringspot virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
RdRP_3
Tombus_P33
RdRP_4
RdRP_2
Motif
Other DBs
NCBI-GeneID:
935900
NCBI-ProteinID:
NP_613260
RS:
NC_003532
UniProt:
P17459
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Position
NC_003532:161..2617
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AA seq
818 aa
AA seq
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METIKRLIWPKKEIFVGDFAIGVNRTVPVDVFQLVCRVVLRYMRTGKIECESDSLSKFVV
ELLKTDCAAKWEWFMKRRQGGDYIVPLSIATIPLMPLLSCTTSVRAVSVGVLGCGFSSNI
PIPRLSVPRKGLLLRLAAGLALAPICALAVYATLPREKLSVYKLRTEARTHMEDEKEATD
CLVVESARELKGKDGEDLLTGSRMTKVVASTGRRRRTPYAAKVAQVARAKVGYLRNTPEN
RLIYQRVIIEIMDKDCVRYVDRDVILPMAIGCCFVYQDGVEESAALWGSQDSLGVKXGGL
VRLPGVVTQINRDIPSDVLLPQEVLEVRTGPPIAKDRNIFMVAGCPSQARFLVHNHCLKN
LKRGLVERVFCVEKDGKLTRTPQPTKGSFGRLSPFRKAVCEKVGVAHRLGYDGFLSYYSG
AKLRTYTRAVESLHITPVSERDSHLTTFVKAEKISTSKGDPAPRVIQPRNPRYNVELGRY
LRHMESKLMKAVDDVFGETTCIKGYTADEVGAIFRRKWDRFDKPVAIGLDASRFDQHCSV
EALQYEHSFYRALYPGNKLLSKLLEWQLHNKGKGYVPDGTITYKKEGCRMSGDINTSLGN
YLLMCAMVHGYMRHLGINEFSLANCGDDCVLIIERRNLKRVQGTLPGYFLNLGYTMKVES
PVFQLEEVEFCQAHPVQFQGGWKMVRNVRTAMSKDVHCVNNIRDLATRRAWSNAQHHGGL
ALSAGIPVVERFYSRFPLYDMPVKHQRIDTVTNVHKWRGSGGNYHVTPESRASFWAAFGL
TGDEQVALEDRLDRWEMDLFGREGVDAHEPSILDSAVA
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggagaccatcaagagattaatctggcctaagaaagaaatttttgtaggcgatttcgcg
atcggtgttaataggacggtaccggtggatgtcttccaattggtgtgccgtgttgtgctg
agatatatgaggacagggaaaatagagtgtgagtcagacagtctgtctaagttcgttgtg
gagttattaaagacagattgtgctgctaagtgggaatggtttatgaagagacggcagggg
ggtgattacatcgtccctctatctatagccaccatccctctcatgccgctgttgagttgt
accacctcggtacgcgcagtctcagtcggggttttgggttgtgggtttagctccaatatc
ccaatacctcgtctatctgtgccaaggaaagggttgctcctcagactggcggccggccta
gcgttagctcctatatgcgcgctggccgtgtacgctaccctgcccagggaaaaactgtcc
gtgtataagctaaggacggaggcacgcacacacatggaggacgagaaggaagcgacggat
tgtttagtggtggagtcggctcgtgagctcaagggtaaggatggtgaggatctgctcact
ggtagtagaatgaccaaggttgtggcttcgacaggacgtcgtcgcaggacaccatatgca
gcgaaagttgcacaggtggcacgtgccaaggttgggtacctcaggaacactcctgagaat
aggctgatctaccagagggtaatcattgaaatcatggacaaagattgcgtcaggtatgtt
gacagggatgtcatattgccaatggctattggatgctgctttgtgtaccaggatggagtg
gaggagtcggcggcactttgggggtcacaggactccctgggtgtgaaatagggaggccta
gtgcgtctacctggggttgtgacacagatcaatcgagatatcccatctgatgtgttactt
cctcaggaggtgctagaggttcgcacaggacctcccatagctaaggaccgtaatatattt
atggttgcaggttgcccatcacaggcacggttcttagttcataatcactgcctgaaaaac
cttaaaaggggtcttgtggagagggttttctgcgtcgagaaggacggtaaactcactcgc
actccacaacctaccaaaggatcctttggacgtctttccccgttcaggaaagcagtttgt
gagaaggttggggtggcccatcgcttagggtatgacgggttcctgtcatactacagtggt
gcgaaactccgtacttacacgcgagctgtggagagtctgcatatcactcctgtttcagag
agggatagtcatctgactaccttcgtgaaagcagagaagatatcgacgtctaagggtgac
ccagcacctagggtgatacagcctcgaaaccctaggtacaatgtggaacttggaagatat
ctacggcatatggaatccaaactaatgaaagctgttgatgacgttttcggcgaaacgacg
tgcatcaaaggttatacagctgatgaggtaggcgcaatcttcaggaggaagtgggatagg
ttcgataaacctgttgccattggtctcgacgcgtctagatttgatcaacactgttccgtt
gaagcgttgcaatatgagcatagcttctacagggccttgtaccctggcaacaaactcttg
agtaagttgttggaatggcagctccataacaaaggtaaaggttatgtccctgatggaacc
ataacttacaagaaggagggctgtcgtatgagtggggatataaatacctcgttgggcaat
tacctgctgatgtgcgcgatggtacatgggtacatgcgtcacttggggataaatgagttt
agtctggcaaactgcggggatgactgcgttttgattatcgagcgcaggaatcttaagcgg
gtacagggaacacttcctggttatttcctaaatctaggttatacaatgaaggtggaatcc
cctgtatttcaattggaagaggttgaattctgccaggcacaccccgtacagtttcagggc
ggttggaagatggtcagaaatgtccgcacagccatgagcaaagatgtccactgcgttaac
aatatacgcgatctggcaacaaggagggcttggagtaatgcccaacaccatggtgggttg
gcgcttagcgctggtatacctgtggttgaaaggttttactctaggtttcctctgtatgac
atgcccgtcaaacatcagcgtattgacacagtgacaaacgtacataaatggcgcggatca
ggtgggaactaccatgtgaccccggagtctagagctagcttttgggcggcatttggactc
acgggggatgaacaggtggcccttgaggatcgtctggatagatgggagatggatctattt
ggaagagagggtgttgacgctcatgagcccagcatccttgattccgccgtagcttga
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