KEGG   Viruses: 940180
Entry
940180            CDS       T40000                                 
Symbol
LMVgp1
Name
(RefSeq) Lettuce mosaic virus; polyprotein
Virus
12202  Lettuce mosaic virus
SSDB
Motif
Pfam: Peptidase_C6 Poty_coat RdRP_1 Potyvirid-P3 Poty_PP Peptidase_S30 Peptidase_C4 DEAD Helicase_C Flavi_DEAD ResIII Trypsin_2 Cas3-like_C_2 DUF7129
Other DBs
NCBI-GeneID: 940180
NCBI-ProteinID: NP_619667
RS: NC_003605
UniProt: P89876
LinkDB
Position
NC_003605:104..9871
AA seq 3255 aa
MATLDNCTQVHHMFAYNREHGTNYTRNHFRRYLAAQRIGFYYDWDDDVYECPTCEAIYHS
LDEIKNWHECDPPAFDLNDFITDARLKSAPVPDLGPVIVETPKVEEKQELNFFAATPAPE
VLQWKCRGLQFGSFTELETSEPVVSAPKPNCEEPARTIAKPEEPVEQETCGDGKRLLQAQ
MEVDKAEQDLAFAYLSASLKPRLEGRTTATIARRRDGCLVYKTKPSWSQRKGTKKILKVD
TLACKNPYIPAVVDKISIAGGSSASVMHEQQKPKILHTTPSRKVATHYKRTVMNQQTLTA
LINQVGTIILNAEKEFEVVGCRKQKVTGKGTRHNGVRLVKLKTAHEEGHRRKVDIRIPNG
LRSIVTRISARGGWHKTWTDSELSPGSSGYVLNSSKIIGEFGLRRHSIFVVRGRVYGKII
DSQSKVTHTLTHRMVQYSDVARNFWNGYSTCFMHNTPKDILHTCTSDFDVKDCGTVAALL
TQTLFQFGKITCGKCAIEYKNLTRDELATRVNKEIDGTIISIQTQHPRFVHVLNFLRLIK
QVLNAKNGNFGAFQETERIIGDRMDAPFSHVNKLNAIVIKGNQATSDEMAQASNHVLEIA
RYFKNRTENIQKGSLKSFRNKISGKAHLNPSLMCDNQLDKNGGFEWGQRSYHAKRFFDGY
FETIDPSDGYSKYTIRRNPNGHRKLAIGNLIVSTNFESHRRSMVGEPIEDPGLTNQCVSK
EGGAFIYPCCCVTDEYGKPTLSEIKMPTKHHLVLGNAGDPKYVDLPKEAEGKMFVAKDGY
CYINIFLAMLVDVPEDQAKDFTKMAREIAVKQLGEWPSMMDVATACNILATFHPDTRRSE
LPRILVDHATKTFHVIDSYGSITTGYHILKANTVTQLVKFAHESLESEMQHYRVGGEPDK
APRKPAGNVPTLGISDLKNLGVESENEEHSIRPNLQRLIKAIYRPRMMRSLLTEEPYLLI
LSIVSPGVLMALYNSGSLERTMHEFLQTDQRLSATAQILKHLAKKVSLAKTLTIQNAILE
GGAGSLNEILDAPAGRSLSYRLAKQTVEVMMARSDMDKELVDVGFSVLRDQKNELIEKSY
LMDLEDSWRALPLCGKLSAMRVSRRWRDTSTPEAIPTGAADLKGRYSISVGSVSKSAILH
LKGICSGAVKRVKDKWVGVQVQGVKWLAKSVHYMIPELTNILNVGTLLLTLISLGVRFRS
LTGQFKEMKYKETLAREEELRKRIRTYNSTYYEIHGKHADAKQITKFITHHDPKLLEVVE
FYEGPEEEEVEHQAKREDQANLERIIAFTALVMMMFDSERSDCVYRSLSKLKSLVSTCDD
DVRHQSVDEIIDLFDEKKETIDFEIEGKELYSSRVVDSTFSKWWDNQLVRGNTMAHYRTE
GHFMTFTRETAASVAAEIAHNEYRDILLQGGVGSGKSTGLPFHLHKKGGVLLIEPTRPLA
QNVYKQLGSNPFHLSPNLRMRGACKFGSSQVTVATSGYALHFIANNAQSLKMFDFIIFDE
CHVLDASAMAFRCLLQEFEYQGKIIKVSATPPGRKLDFKPMHMVDITTENELSIQQFVQG
QGTGVNCDATKKGDNILVYVSSYNEVDMLSKMLNDKGYKVTKVDGRTMKLGSVEVETVGT
PQRKHFVVATNIIENGVTLDVDVVVDFGQKVVPILDSEHRMIRYTKKSITYGERIQRVGR
VGRNKAGSAIRIGSTEMGTEEIPASIATEAAFLCFTYGLPVMTSNVSTSVLGNCTVRQAR
TMQKFELSPFFMVDLVHHDGTVHPAINSLLRQFKLKESDTKLSTLAIPNAVTTFWKSARE
YNSLGARTTIDDAAKIPFMIKDVPEHLQEKLWETIQQYKGDAGFGRCTSANACKIAYTLS
VSPFMIPATINKIDALMAEERQKLEYFQTVTANTCTISNFSISSLGDMIRSRYSTNHSRE
NLQKLQTVRDTIINFECQAGTSDGGTFDMETAQKLAEEYGCIDVIYHQSKGALSKRLGLK
GRWNQSLICKDLLIFCGVAIGGTWMMFQSFKDGMADVIRHQGKGKRQRQKLRYRQARDNK
MGIEVYGDDATMEHYFGAAYTEKGKKSGKTKGMGTKNRRFVNMYGYNPEDYSFIRFLDPL
TGKTMDEQVFTDISLVQDAFGKERLKLLSEGEIESEHMRNGIRAYLVKNLTTAALEIDMT
PHNSCQLGTKTNNIAGFVDREYELRQTGEARVVAPALIPKDNPITDEDIPVKHESKTLFR
GLRDYNPIASAICLLTNESDGMKETMYGIGFGNTIITNQHLFRRNNGVLRVQSRHGEYVL
PNTTQLKVLPCEGRDIMVIILTPDFPPFPQKLKFRPPIKGEKICLVGSLFQDKSITSTVS
ETSVTTPVDNSFLWKHWITTKDGHCGLPLVSSNDGYIVGIHSATSSRQTQNYHAAMPEDF
HQTHLIDPVSKSWVKHWKYNPDNMVWGGINLINSTPREPFKINKLVTDLFGDAVQFQSKQ
DEWFASQLKGNLKAVGKSTSQLVTKHTVKGKCMMFELYLQTHEEEKEFFKPLMGAYQKSR
LNREAFTKDIMKYSTPITVGIVDCDTFLKAEKGVIKRLEKLGFSGCEYVTDEEAIFQALN
MKAAVGALYSGKKRDYFESYGPEEKENILRESCKRLYTGKFGVWNGSLKSELRPMEKVMA
NKTRVFTAAPLDTLLAGKVCVDDFNNYFYSKNIEAPWTVGMTKFYGGWNELLTKLPDGWV
YCDADGSQFDSSLSPFLINSVLRIRLKFMEDWDLGEQMLKNLYTEIVYTAILTPDSTIVK
KFKGNNSGQPSTVVDNTLMVVLAMTYTLHKLGFEDEEQDSMCKYFVNGDDLIIAIKPEYE
SLLDQFQHCFKSLGLNYDFNSRTRKREELWFMSHCGIKKDGIFIPKLEPERIVSILEWDR
SDQPVHRLEAICAAMIESWGYDKLTHEIRKFYKWCLDEAPYADLAKAGKAPYIAECALKR
LYTSKEASEAELEKYMEAIRSLVNDEDDDDMDEVYHQVDTKLDAGQGSKNDDKQKSSADS
KDNVITEKGSGSGQVRKDDDINAGLHGKHTIPRTKAITQKMKLPMIRGKVALNLDHLLEY
EPNQRDISNTRATQKQYESWYDGVKNDYDVDDNGMQLILNGLMVWCIENGTSPNINGTWV
MMDSEEQVEYALKPIIEHAKPTFRQIMAHFSDAAEAYIEMRNKKKPYMPRYGRLRGLNDM
GLARYAFDFYETTSATPNRAREAHNQMKAAALVGTQNRLFGMDGGGSTQEENTERHTAAD
VNQNMHTLLGVRGLH
NT seq 9768 nt   +upstreamnt  +downstreamnt
atggcaactctagacaactgcactcaagtacaccacatgttcgcttacaatcgcgaacac
ggaacaaactacacgaggaaccattttagaaggtacttagcagcccagcgaataggcttc
tattatgattgggacgatgatgtctatgaatgtccaacgtgtgaagctatataccattct
ttggacgaaataaagaactggcatgagtgcgacccaccagcattcgaccttaacgacttc
ataactgatgctaggttgaaatcagcaccagttccagatctcggaccggtgatcgtcgaa
accccaaaagtggaggaaaaacaagagcttaacttcttcgctgcaaccccggcacctgaa
gtgttacagtggaaatgtagagggttgcaattcggttcatttactgaacttgaaacatct
gagccagttgtttcggcaccaaagcctaattgtgaagagccggctaggaccatcgcaaag
ccagaggagccagtcgaacaagagacctgtggagacggaaaaagactccttcaggcgcag
atggaagtcgacaaagctgaacaagatcttgcattcgcttacctaagcgctagcctaaaa
cctaggctggagggcagaactactgcaactatcgcaagacgcagggatggatgtttggtt
tataaaaccaaaccaagctggtcgcagaggaagggaacaaagaagatccttaaggttgac
accctagcttgcaaaaacccatacattccagcggttgttgacaagatttcaatcgcagga
ggctcatcagctagtgtgatgcacgaacaacagaaacctaaaattctgcacactacacca
tcaagaaaagtggccacgcattataaacgaacggtgatgaaccaacagacactcacggct
cttataaatcaagttggcacgattatactaaacgcagagaaagagtttgaagtggtgggc
tgcagaaagcaaaaagtaactggcaagggaactagacacaacggtgttaggctggtaaag
cttaaaactgcacatgaggaagggcatcggagaaaagtagatatacgcatccccaatggc
ctgcgctcaattgttacgcgtatttcagctcggggcggttggcacaaaacatggacagac
tcagaactatccccaggatctagcggatacgtattgaactcgtcaaaaatcataggagaa
tttggtttaaggcgacacagtatattcgttgttagggggagggtatatggtaaaattata
gactcgcaaagtaaggtcacacacaccctcacgcaccgcatggttcaatacagcgacgtc
gcacgaaacttctggaacggatactcaacttgtttcatgcacaacaccccaaaggacata
ctccatacctgcacatcagattttgatgttaaagattgcggcactgtcgcagcactttta
actcaaacactgtttcaatttgggaaaatcacctgtggaaaatgcgcaatcgagtacaaa
aatctaacgcgagatgagcttgccacgcgtgttaataaggagatcgatggaaccataatc
agtattcaaactcagcatccacgcttcgtgcatgtactcaactttctcaggttaattaaa
caagtgctcaatgctaagaatgggaactttggagcatttcaagagacggagaggataatt
ggggatcgaatggatgcacctttctcacacgtaaataagttgaatgctatcgtcattaaa
ggtaatcaagcaacgtccgatgagatggcacaagcatcgaaccatgtcctcgaaatcgcg
cgatatttcaagaaccggactgagaacatccaaaagggctcactaaagtcattcaggaac
aagatctccggtaaggcacacttaaatccgagtcttatgtgtgacaatcaacttgataag
aatggtgggtttgaatgggggcagcgaagttaccatgccaaaaggtttttcgacgggtac
ttcgaaaccattgacccttccgatggctacagcaaatacaccataagacgcaatccaaat
gggcatcgaaagttggcaattggtaatttgatcgtctccacaaactttgaatcacataga
agaagtatggttggagaaccaattgaagaccctggtctcactaatcagtgcgtaagcaaa
gagggaggtgccttcatctatccatgctgctgtgtgacagatgaatatggtaaaccaaca
ttatctgagatcaaaatgcccacaaagcatcatttagtcctaggaaatgccggtgacccc
aaatatgtggatttaccaaaggaagcggaaggaaagatgttcgtagcaaaagatggatat
tgttacataaacattttcttggctatgctcgtcgacgtcccagaggatcaggctaaagat
ttcacgaaaatggcacgcgagatagcagtgaaacagctcggggagtggccctcaatgatg
gatgtagcaacggcttgtaatatactggctacatttcatccagacacccgaagatcggaa
ttaccccgaatcttagtcgatcatgcaacgaaaacatttcatgttattgactcatatggt
tcaatcacgactggatatcatattctgaaagccaataccgtgacacaactcgtcaagttc
gctcatgaatcactagaatccgagatgcaacactacagagtcgggggggaaccagataaa
gcacccagaaaaccagctggcaatgttccaaccctaggaatttcagacctcaagaacctt
ggagtggaatcagaaaacgaagaacactcaatccgaccaaatcttcaaaggttaatcaag
gcgatctacagacctcgaatgatgcgcagcctcttaacagaggaaccatacttattaatc
ttaagtattgtatcccctggtgttctgatggcactctacaacagtggttccttggagcgg
acaatgcatgagttcttgcaaactgatcagagactgagtgccaccgcccaaatcctaaaa
catctagcaaagaaagtttcactcgcaaagacacttacgatccagaacgctatcttggag
ggtggagcagggtcactgaatgaaattcttgacgcacccgcgggacgatccctatcatat
agactagcgaagcagacagtggaggtgatgatggcgcggagcgacatggacaaggaattg
gtggacgttggatttagtgttcttagggatcagaagaatgaactcatagaaaaaagttat
ctcatggatttggaggactcgtggcgcgcattgccattgtgtggaaaattatcagcaatg
cgagtctcgcggcgatggcgggacacctctactcccgaagcaatcccaacaggtgccgca
gatttgaaaggcagatacagtatctcggttgggtctgtttccaaaagcgcgatcttgcac
ctaaagggaatttgctcaggcgcagtaaagagagttaaagacaagtgggtcggagtgcaa
gtgcaaggcgtgaaatggttagctaaatcagtgcactacatgataccagagctaacgaac
atactgaacgttggaaccctcctcctaacactgatatcgttaggcgtacgattccggagt
ctgactggccagttcaaagagatgaagtataaagagacgctagcaagggaggaggaacta
cgtaagcgcatacgcacctacaacagtacttattatgaaatccacggaaagcacgctgac
gccaaacaaatcaccaagttcataacgcaccacgatccaaaactactagaagtagttgag
ttttacgaaggtcctgaagaggaagaagtagagcatcaagcaaagcgagaggaccaagct
aatctcgaacgtattatcgcctttacagctttagtgatgatgatgtttgatagtgagagg
agtgattgtgtgtacaggagtctatcaaagcttaaatcattagtatctacgtgcgatgat
gatgtacgccaccagagcgttgatgaaatcattgacctgttcgatgagaagaaagagacg
atagatttcgagattgaaggaaaagaactttactcttctcgcgtggtagactcgacattc
agcaagtggtgggacaaccaattggtgcgaggcaacacaatggcacactacagaacagaa
gggcacttcatgacgttcactcgtgaaacagctgcgagtgtggcagccgaaattgcacat
aacgagtatagagatattctcttgcaaggtggtgtcggctccggcaagtctacaggtctc
ccgtttcacttacacaaaaagggaggtgtgttactcatcgaaccaactcgtccgttagct
caaaacgtatacaagcaacttggaagtaatccttttcacttgtcaccaaatttgcgcatg
cgaggtgcttgcaaatttgggtctagccaggtaactgtggccacgagtggttatgcctta
cacttcatagcgaacaatgcgcaaagtcttaagatgtttgacttcatcatttttgatgaa
tgtcacgtgttagatgccagcgcaatggcgtttaggtgcttactgcaggagttcgaatac
caagggaagatcataaaggtgtcagctacaccaccggggaggaaacttgacttcaaacca
atgcacatggtcgatattactacagaaaatgaactatcaatacagcaattcgtccaaggc
caaggaaccggagtaaactgtgatgcaacaaagaaaggagacaacatcttagtctacgtt
tcaagttacaacgaagtagacatgttgagcaaaatgttaaatgacaaaggctacaaagtg
acaaaggttgatggtaggacgatgaaactagggagcgtggaagtagaaacagtaggcacc
ccacagcggaagcactttgtagtggcaaccaacatcatagaaaatggcgttacattggac
gtcgatgtcgtggtggatttcggacagaaagtagttcccatccttgatagtgagcaccga
atgatccggtatacaaagaaaagtatcacatatggtgagcgaatccaaagagtgggaagg
gttgggcgcaacaaagctggttcagccattcggataggaagcactgaaatggggacggaa
gaaataccagcatcaatcgcaacagaagcagccttcttgtgtttcacatacggacttcct
gtcatgacaagcaacgtgagtacaagcgtactcggcaactgtacagtaagacaggcacgg
acgatgcaaaagtttgagctgtcccctttctttatggtcgacctggtacaccacgacggt
acagtacacccagcaattaacagcctcctgagacagttcaagttgaaagaatcggacacc
aaactaagcacgctggcaataccgaatgcagtaaccacattctggaagagcgctcgagag
tacaactccttaggagcccgcacaacaatcgatgatgcagctaaaataccatttatgatc
aaggacgttccagaacacttgcaagaaaaactttgggaaacaattcagcagtacaagggc
gatgcagggtttggaagatgcacatcagccaatgcgtgcaaaatagcatacacactctct
gtgagtcccttcatgatcccagcaacaatcaacaagatcgacgccctaatggccgaagaa
cgacaaaagttggaatacttccaaacagtaacagccaacacatgcacaatctcaaacttc
tccattagtagtcttggcgatatgatcaggtcgagatactcaacaaaccattctagagaa
aacctgcagaaattacaaacggtcagagacacaatcatcaactttgagtgccaggctgga
actagtgatgggggtaccttcgacatggagacagcacagaaattggcagaggagtatggg
tgcatcgatgtcatttatcaccaatcgaaaggagctcttagcaaacgactcggtctcaaa
ggcaggtggaatcagagccttatatgcaaagacctattgattttctgcggcgtagccatt
ggcggcacatggatgatgtttcagagcttcaaggacgggatggctgacgtaattcgacac
caaggcaaaggtaaacggcaaagacagaagcttcgttatcgacaagcaagggataataag
atgggcattgaagtttatggtgacgatgcgacgatggaacactattttggagctgcgtac
acagagaaaggaaagaaatccggaaagacgaaaggaatggggacgaaaaatcgaagattt
gttaacatgtatgggtacaacccagaagattactcgttcatccgatttctggacccactc
acagggaaaacaatggatgaacaagtattcactgacataagtctcgtccaagatgccttt
ggtaaagaaagactcaaactcctgtccgaaggggaaattgagtcagagcacatgcgaaat
gggattagagcttatcttgtcaagaatcttaccacagcagctctcgaaatagacatgacc
cctcacaactcttgccagctcggaaccaagacaaacaacatagcaggatttgtagacagg
gagtacgaattgcgtcaaaccggggaagccagggttgttgctccagcactgattccaaaa
gacaatccaatcacggacgaggatattcccgtaaagcatgaaagcaagacattgttcagg
ggcttaagagattataaccctatagcatcagcaatatgcttgctcactaacgaatcagac
ggaatgaaagagacaatgtacggcattggttttggcaacacaattattacaaaccaacac
ctattcagacgcaacaatggcgtactaagggttcagtcgagacatggtgaatacgttctt
ccaaatacaacgcaactcaaagtacttccttgcgaaggaagggacataatggtcatcatt
cttacaccagacttccctccgttcccacaaaaactgaaattccgtccaccgatcaaagga
gagaagatttgccttgttggatccttatttcaagataagagcataaccagcaccgtatcc
gagacgagcgtgacaacacccgtggacaacagcttcttgtggaaacactggatcactaca
aaagacggacattgcgggcttccactagtatcatcaaatgatggatacatagtcggaatc
cacagcgccacaagctcacggcaaacacagaactaccatgcagcgatgcccgaagatttt
catcaaacacatcttattgatccagtttcgaaatcgtgggtgaaacattggaagtataat
ccagataacatggtttggggaggcataaatctcattaatagcacgccaagggaacccttc
aagataaacaaattagtgacagacttattcggggatgcagtacagtttcagtccaaacag
gatgagtggttcgcaagtcagttgaaaggcaacttgaaagcagtggggaaaagcacaagc
caactcgtgacaaagcacacagtcaagggtaagtgcatgatgttcgagttatacctgcaa
acacacgaagaggaaaaggaattcttcaaaccactgatgggagcctaccagaagagccgc
ttaaacagagaagcatttacaaaagacatcatgaaatactccacaccgataacagtaggc
atcgtcgattgtgacacgtttctgaaagccgaaaaaggagtcataaaacgcttagagaaa
cttgggttcagtggttgcgaatatgtcacagatgaagaggcaatatttcaagccctaaat
atgaaggcggctgttggtgcactatatagtggaaagaagagagattactttgagagctac
ggtccagaagaaaaagagaatatcttgagagaaagctgtaagcgactatacacaggtaag
tttggagtgtggaatgggtcactcaagtcggaactgagacctatggagaaagttatggca
aataagacacgtgtctttacagcagcgccgctcgacactctgcttgctggaaaagtctgt
gttgatgacttcaacaattacttctacagcaaaaacatcgaggcaccttggacagttggc
atgacgaagttttatggtgggtggaacgaactccttacgaagttaccagacggctgggtt
tattgcgatgcagatggatcacaattcgatagttctttgtcaccatttctcatcaactca
gttctcagaatacgtttaaagttcatggaagattgggatcttggtgaacaaatgctcaaa
aatttgtacacagaaattgtatatacagcgatcctcactccagattcaaccatagtgaag
aaattcaaggggaataacagcggacagccatccacggtagtagataacacattgatggtc
gtgctagcaatgacatacacgctgcacaagttaggcttcgaggacgaggaacaagactct
atgtgcaaatacttcgtcaatggagatgacctgatcatcgcgataaaaccagaatatgaa
tcactactggatcagttccaacactgtttcaaaagtttgggcttaaattacgatttcaac
tcacgaacgaggaagagggaggaattgtggttcatgtcacattgcggcatcaagaaggat
ggaatcttcatcccaaaactcgaaccagagcgcattgtgtcaatcctagagtgggataga
tcagaccagccagtacatcgcttagaggccatatgcgcagcaatgatcgaatcatggggt
tacgacaagttaacccatgaaattcgaaaattttacaagtggtgtctggacgaagcacca
tatgctgatttggcaaaagcgggaaaagcaccgtacatagcagagtgtgctcttaaacga
ttgtataccagcaaggaagccagcgaagcagaattagaaaaatacatggaagccatacgt
agtcttgtcaatgatgaagatgacgacgatatggatgaagtctatcatcaagtagacacg
aagcttgatgcaggccaaggcagtaaaaatgatgataaacagaagagctcagcggattca
aaagataatgtcatcacggagaaaggaagtggttctgggcaggtgaggaaggatgacgac
atcaacgcagggctacatggcaaacacaccatacctcgtacaaaggcaatcacacagaaa
atgaagttaccaatgatccgaggtaaagtggctttgaaccttgatcatttgctggagtac
gaaccaaaccagagagacatatcaaacacacgcgcgactcaaaaacaatacgagtcatgg
tacgacggagttaagaatgactatgatgtggatgataatggcatgcaattaattctgaac
ggattgatggtttggtgtatagaaaacgggacatccccgaatataaatggaacatgggtg
atgatggacagtgaagaacaagtagaatatgctctgaaacccatcatcgaacacgcgaaa
cccacgtttcgccagataatggcccattttagtgacgcagccgaggcgtacattgagatg
agaaacaagaagaaaccgtatatgccacgatacggacggctacgaggcttgaacgatatg
gggttagctcgctacgctttcgacttttacgaaacaacatcagcgaccccaaatcgggcg
agagaggcgcacaatcaaatgaaggcagctgctctagtgggaacacagaacagactgttt
ggaatggatggaggcggttcaacccaggaagagaacacggagaggcacacagccgcagat
gtaaatcagaatatgcacactctcttaggcgtgagagggttgcactaa

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