Viruses: 940420
Help
Entry
940420 CDS
T40000
Symbol
R54, RcVgp046
Name
(RefSeq) rat cytomegalovirus strain Maastricht; pR54
KO
K18964
Herpesviridae DNA polymerase catalytic subunit [EC:
2.7.7.7
]
Virus
79700
rat cytomegalovirus strain Maastricht
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
divDNApol
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
940420
NCBI-ProteinID:
NP_064160
RS:
NC_002512
UniProt:
Q85428
LinkDB
All DBs
Position
NC_002512:complement(61690..65211)
Genome browser
AA seq
1173 aa
AA seq
DB search
MDAEIFFNPYLHTKRSRRDWRAEPAADNKESFLQIVPRGVLYDGATGLIKTQCELSPRMF
FEDREYVLDPVMVWPGLDIAADGEAVPPCDFVFHTFDQVVSLVFAEGRGRARRWRQHISP
AGNVIRLFGATALGTPVCVNVFGQKSYFYCENRPGEDLRDVIHDLADASRSPGPLSASPS
RRAPLVAVRLRPGDIPHLYRVSFNNWSMARKVGALMVQEGRRAYEIGVDPLARFLIDRKI
PSFGWLRVGRFSRRCNGQTSTAVIELDCQVGDVVAGQPLPNWPPYRCLSFDIECMSASGA
FPQAEVLDDIVIQISCVCFVVGGSGAHRFTFAEKHLFTIGSCAPVEDVWVYTFPSEYEML
LGFFIFFNRFSPDFLTGYNINGFDIKYLLHRMCRVYQKDAGRFTKLRRGGRFFVNSPDGS
GDAFGGRSGVIKVFCAGTVVLDMYPVCSAKTSAPNYKLDTMAERYLGQRKEDLSYKEIPV
AFLGGEEGRARVGKYCVQDGARQGPLNVIAYHYEAAASPNLARIPLRRVIFDGQQIRIYT
CILEECSARGMVLPSLPSSPPSSGGDGAGLEGGDGGTAGRRKKKRSGSAPDGEDEDDPEG
GDEGENGECRENGLEKEGSQGSASGNVGYQGATVLAPECGYHHNPILVFDFASLYPSIIM
SNNLCYSTLLVDGSPPVPDEDVLEVVVGEATRYRFVREHVRRSLLAELLVRWLKQRKLVR
DAMKACGDEKQRMFMDKQQLALKVTCNAFYGFTGVAAPMLPCLPIAASITKIGRDMLLAT
SAYMERHCNDVEFLVSEVGVPREAVDRDALRVKIVYGDTDSVFVGFRGIGREVLVKVAGK
LAAAVTRDLFRDPVRLEFEKMFVSLMMICKKRYIGKVYGENKLCMKGVDLVRRHACAFVR
SIVSEVVDVIFHDEAVSEGAMRLSEMSFEELRRQGVPVGFFPVIRRLCDARDDLFLDRVP
VAQLVLSSVLSQDASRYKQKNLPHLAVYRSLVERGEELPGVGDRIEYVLTCPDESKKRAP
NYEVAEDPAHVREAKIPIHAEKYFDQIVKAVTNVLLPVFPKDMPRRERFFAYVLPIRTYL
PEVFLRMSKEDRECGAYLARESGLGMNSFIVYGEDTCGSRVGEGPGRGEGLGVGGGEGTR
PPRKNGHARLVSGCLYGSRPFNKKDRFVTLHIE
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgagatcttcttcaacccttatctgcacaccaagcgctcgcgacgggactgg
agagccgagccggccgccgataataaagagtcttttttacaaatcgttccgcgtggcgtg
ttgtatgatggcgcgacggggttgatcaagacgcagtgcgagctctcgccgcgtatgttc
ttcgaggaccgggagtacgtgctggaccccgtcatggtctggcccggcctcgacatcgcg
gccgacggagaggccgtccccccctgcgatttcgtgtttcacaccttcgatcaggtcgtc
agcctcgtcttcgccgagggcagaggacgtgcccgtcgctggcgccagcacatctctccc
gcggggaacgtcatccgcctgttcggcgctaccgcgttggggacgcccgtttgcgtgaac
gtgttcgggcagaaatcgtatttctactgcgagaaccggcccggcgaggacctccgcgac
gtgatccacgacctcgcggacgcgtcgcggagccccggacccctttcagcgtctccatct
cgccgcgcgccgctcgtcgctgtgcggctacggcctggggacatcccgcacctctaccgc
gtctccttcaacaactggagcatggcccgcaaggtcggggcgctcatggtccaggagggc
cggcgggcctacgagatcggcgtcgatcccctcgcccgctttctgatcgatcggaagatc
ccgagtttcgggtggctgcgcgtggggcgcttctcccggcgctgcaacgggcagaccagc
accgccgtcatcgagctggactgccaggtcggcgacgtggtggccgggcagccgctcccc
aactggcctccctaccgctgtctctccttcgacatcgagtgcatgagcgcttcgggggcc
ttcccgcaggccgaggtcctcgatgacatcgtcatccagatctcgtgcgtctgcttcgtc
gtcggggggtcgggggcgcatcgcttcaccttcgccgagaaacacctcttcaccatcggc
tcctgcgcgcccgtcgaggacgtctgggtctacaccttcccgtccgagtacgagatgctg
ctgggcttcttcatcttcttcaaccgcttctccccggacttcctcacgggctacaacatc
aacggcttcgatatcaagtatctcctgcaccgcatgtgtcgggtctaccagaaggacgcc
ggccgcttcaccaagctgcggcggggcggtcggttcttcgtcaactctcccgacggctcc
ggggacgcgttcggcggccgttccggggtcatcaaggtcttctgcgcgggcaccgtcgtc
ctggacatgtaccccgtgtgctccgccaagacctccgcccccaactacaagctcgacacc
atggccgagcgctacctcggccagcgcaaggaggacctcagctacaaggagatccccgtg
gccttcttgggcggcgaggagggccgcgcgcgcgtggggaagtactgcgtccaggacggc
gctcgtcagggacctcttaacgtcatcgcctaccactacgaggcggccgcgtcgcccaac
ctggccaggatccccctccggagggtcatcttcgacggccagcagatccggatctacacc
tgcatcctggaggagtgttccgcccgggggatggtcctgccgagcctgccctcttccccg
ccgtcctccgggggcgacggcgccgggctcgagggcggggacggcgggaccgcgggtcgg
aggaagaagaagcggtccggatcggcccccgacggtgaggacgaagacgatcccgaggga
ggggatgagggggagaacggggagtgtcgggagaacgggctggagaaggaggggtcccag
ggctccgcgtccgggaacgtcggctatcagggggccaccgtgttggcgcccgagtgcggg
taccaccataaccctatcctcgtcttcgatttcgccagcctctacccctccatcatcatg
tccaacaacctctgttactccaccctgctcgtggacggctctcctcccgtcccggacgag
gacgttctggaggtggtggtgggcgaagcgacgcgctaccgtttcgtcagggagcacgtc
cggcgctccctgctcgccgagctcctggtacggtggctcaagcagcggaagctggtccgc
gacgccatgaaggcgtgcggcgacgagaagcagcggatgttcatggacaagcagcagctg
gcgctcaaggtcacctgcaacgccttctacggcttcaccggcgtcgcggccccgatgctg
ccctgcctgcccatcgccgcctccatcaccaagatcggccgcgacatgctgctggccacc
tccgcgtacatggagcggcactgcaacgacgtcgagttcctggtctccgaggtcggcgtg
ccccgcgaggccgtcgaccgcgacgcgctgcgcgtcaagatcgtgtacggggacaccgac
agcgtcttcgtcggcttccgcgggatcgggcgagaggtcctggtcaaggtggcggggaag
ctggccgccgccgtcacccgcgacctgttccgcgaccccgtgcgcctcgagttcgaaaag
atgttcgtctccctcatgatgatctgcaagaagcgctacatcggcaaggtctacggcgag
aacaagctctgcatgaagggcgtcgatctcgtgcggcggcacgcctgcgcgttcgtccgg
agcatcgtctccgaggtcgtcgacgtgatcttccacgacgaggccgtgtccgagggcgcc
atgcggctctccgagatgtcgttcgaagagctgcgccgccagggggtgcccgtcggcttc
ttcccggtcatccgccgcctctgcgacgcccgggacgacctcttcctcgatcgggtgccc
gtcgcccagctcgtcctctcgtcggtcctctcgcaggacgcgtctcgctacaagcagaag
aacctacctcacctggcggtctaccggtctctcgtcgagcggggcgaggagctgccgggc
gtcggcgaccggatcgagtacgtcctgacctgtccggacgagagcaagaagcgggccccc
aactacgaggtggccgaggaccccgcgcacgtccgggaggccaagatccccatccacgcc
gagaagtatttcgatcagatcgtcaaggccgtcaccaacgtgctcctgcccgttttcccc
aaggacatgcccagacgcgaacgcttcttcgcctacgtgttgcccatcaggacctatctg
cccgaggtgtttctgagaatgagcaaggaggaccgagagtgcggcgcctatctcgctcgg
gagtcggggttggggatgaattcgtttattgtgtacggggaggatacgtgcgggagcagg
gtaggagaggggcccggccgcggcgaggggctgggggtggggggcggagaggggacgcgg
cccccgcgaaagaacggacacgcacgcctcgtctccgggtgtttgtacggctcgcgccct
tttaataaaaaagaccgtttcgtcacccttcacatcgagtag
DBGET
integrated database retrieval system
