Viruses: 944391
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Entry
944391 CDS
T40000
Symbol
TCVgp1
Name
(RefSeq) Turnip crinkle virus; p88 replicase
Virus
11988
Turnip crinkle virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
RdRP_3
RdRP_2
Motif
Other DBs
NCBI-GeneID:
944391
NCBI-ProteinID:
NP_620720
RS:
NC_003821
UniProt:
P17460
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Position
NC_003821:64..2391
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AA seq
775 aa
AA seq
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MPLLHTLNTALAVGLLGARYYPEVQTFLGLPDYVGHMKNVVRSVFQGSGLVVVSSDTVGV
RGTYSNRGQIGSSLGCILAVPDSGADIEIDLDRLVGTEEEATSCLVEAVGSTADVPRRRV
RQKGRFAMHAVNAAKLHFCGVPKPTEANRLAVSKWLVQYCKERHVVDSHIRTIVNTALPR
VFTPDAEDIQVVLDLHSVRAHDHRNALAEAGKVRKWWVNLAMHPMTGRSWSRAWRRLCRL
PDDQAISFVRXGCLRELVGRETQISRGENPAMRVFPLANPPKVRRIFHICGMGNGLDFGV
HNNSLNNLRRGLMERVFYVEDAQKQLKPAPQPIPGIFGKLSGIRRRLVRLAGNHTPVPRE
KYPSFYKGRRATIYQKALDSLHDRPVSRKDAELKTFVKAEKINFTAKKDPAPRVIQPRDP
RYNIEVGKYLKPYEHHLYRAIDAMWGGPTVLKGYDVGELGNIMSNTWDKFRKTCAIGFDM
KRFDQHVSVDALRWEHSVYNAGFNCPELAQLLTWQLTNKGVGRASDGFIKYQVDGCRMSG
DVNTALGNCLLACSITKYLMKGIKCKLINNGDDCVLFFEADEVDRVRERLHHWIDFGFQC
IAEEPQYELEKVEFCQMSPIFDGEGWVMVRNPRVSLSKDSYSTTQWANEKDAARWLAAIG
ECGLAIAGGVPVLQSYYSCLKRNFGPLAGDYKKKMQDVSFDSGFYRLSKNGMRGSKDVSQ
DARFSFYRGFGYTPDEQEALEEYYDNLELLCEWDPTGYKEELSDRWILNEFPTTL
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttctacacacactcaacacagcgctcgcagtgggactcctaggagccaggtac
taccctgaggttcaaaccttcttggggctgcctgactacgtgggtcacatgaagaatgta
gtacggtctgttttccagggatctgggctagtagtagtgtcctccgacacagtcggtgtc
agggggacgtatagtaatagaggtcagataggtagtagtctcgggtgtatactagccgtt
ccggatagcggggcggatatagaaatagacttagataggttggtaggaacggaagaggaa
gccacatcctgtttggtggaggcggtaggtagtaccgcagatgtccccaggaggagagtt
cgtcaaaaggggcggtttgccatgcatgccgtcaacgcagcaaagctgcacttttgtggc
gtcccaaaacccactgaagcgaatcgactagcggtctcaaaatggcttgtccaatactgc
aaagagagacatgtcgtagacagccacatcagaacgatagtcaatacggctcttcctaga
gtgttcacgcctgacgcggaagacattcaggtcgtgctggatttgcacagtgtaagagca
cacgaccaccgcaacgccctagccgaagcaggcaaagtgcggaagtggtgggtcaatctc
gcgatgcatcccatgactgggaggtcgtggtccagggcttggaggcgattatgccgactg
cctgacgaccaggcgatctcttttgtccgctaggggtgcttgcgggagctggtcgggagg
gagactcaaatctccaggggtgaaaacccggccatgcgcgtgttcccgttagcaaatccc
ccgaaggttcgacgcatcttccatatctgtggaatgggcaatggtttagactttggagtc
cacaacaactcactcaacaatttgagaagagggttgatggaaagagtcttttacgttgaa
gatgcgcagaagcaattgaaaccagccccccaaccgatcccagggattttcgggaagttg
agtgggattcggagacgattggtcaggttggccggaaatcatacccctgtgcctcgggag
aaatacccgtcgttctacaagggcaggagggccaccatataccaaaaggctttggattct
ctacatgacagaccggtatcccggaaggacgcagaactcaaaacattcgtgaaggcagaa
aagatcaatttcacggctaagaaagacccggctccacgggtcatccagccgagggaccca
cgatataatattgaggttgggaaatacttgaaaccgtacgagcaccatttatatcgggca
attgacgctatgtggggtgggcccactgtgctgaaaggatacgatgtgggggagcttgga
aacattatgagtaacacctgggataaattccggaaaacgtgtgcgataggatttgacatg
aagagattcgaccagcacgtatccgtggacgccctacgatgggaacacagtgtatacaac
gcgggctttaactgtcccgagttggcacagctgctaacttggcagttgaccaacaagggg
gttgggagagcctccgatggctttatcaaataccaagttgatggttgtcgcatgtccgga
gatgttaacacagccttgggcaactgcctactggcttgctctatcaccaagtacttaatg
aagggaatcaaatgcaaattaatcaacaatggagacgattgtgtgctgttcttcgaagct
gatgaagtcgacagggtgcgcgaaaggctgcatcattggatcgactttgggtttcaatgc
atagcggaagaaccacaatacgaattggagaaagttgaattttgccagatgtcccctatt
ttcgatggtgaagggtgggtcatggtcagaaacccccgtgtgagcctctccaaggacagc
tacagcaccacacaatgggcgaatgagaaagatgcagccagatggttggctgccatcgga
gagtgtggcttggctattgcaggtggcgtaccagtgttacaatcatattattcttgcctg
aagaggaattttggacccctggccggggactacaagaagaagatgcaagatgtttccttt
gatagtggattctacaggttatccaagaacgggatgaggggcagcaaagacgtgtcccaa
gatgctaggttcagcttttaccgggggttcggctacactccagacgagcaggaagcgctt
gaggagtactacgacaacctcgaactgctctgtgagtgggaccccacgggatataaagaa
gaacttagtgatagatggatcctgaacgaattccctacaactctctaa
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