Viruses: 944395
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Entry
944395 CDS
T40000
Symbol
WClMVgp1
Name
(RefSeq) White clover mosaic virus; RNA replication protein
KO
K26615
Alphaflexiviridae RNA-directed RNA polymerase
Virus
12188
White clover mosaic virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Vmethyltransf
Viral_helicase1
RdRP_2
ResIII
AAA_16
AAA_22
FtsK_SpoIIIE
T2SSE
Motif
Other DBs
NCBI-GeneID:
944395
NCBI-ProteinID:
NP_620715
RS:
NC_003820
UniProt:
P09498
LinkDB
All DBs
Position
NC_003820:108..3992
Genome browser
AA seq
1294 aa
AA seq
DB search
MAKVRAALDRITDPSVKAVLNEEAYSHIRPVLRESLTNNPYAIAPDAADTLEKYGIATNP
FAVKVHSHGAVKSIENTLLERVGFNLPKEPCIFLFLKRSKLRYLRRGPSNKDIFINLAIE
PRDLQRYEEDTLVESWTRITTRYAYISDTLHFFTRKMLADLFFHNPALDVLYATLVLPPE
ALHKHPSIEPDLYTINYNFNGFQYIPGNHGGGSYSHEFKQLEWLKVGHLKSPELSLTFQM
IESIGANHLFMITRGIKITPRVRTFTKDSYVLFPQIFHPRNLNPSKPFPKVKAMQLFTYV
KSVKNPTERDIYAKIRQLIKTSELSDYHPDEIVHIVNYFVFISKLDSINSYSDILSLPIW
SKALLPIKTKITQLWEKLTGARAFNQLLDALQWKTFTYSLEVVDFSTAPSQRDCFMEDER
LETDTLEDEVSQNANNNKPTSLQNIEEAVKNNPDLPWAPWLLILQAHNADCTQKQYDPEN
NLILPIQEINTLPKHQHPDIPTDLLTLLTKLHREPTTVPLDNHRARAYGSDVKNLRIGAL
LKKQSKDWLASFALKTENIERQVLMSVIHGAGGSGKSHAIQTWMRSLNRRDRHVTIILPT
TDLRNDWTTKVPNLEQANFKTFEKALCQPCGKIIVFDDYSKLPQGYIEAFLAINQNVILA
ILTGDSKQSFHHESNEDAYTATLEPSINTYQPFCRYYLNITHRNKPDLANKLGVYSCSSG
TTSFTMSSQALKGMPILSPSIMKKTALGEMGQKSMTYAGCQGLTTKAVQILLDTNTPLCS
SNVIYTALSRAVDHIHFINTGPNSTDFWEKLDSTPYLKTFLDCVREERMNEIVAVEEPPA
PVPAPTTHFPKVNPTTVIESYVHDLPEKHGREIFSETHGHSNAIQTDNPVVQLFPHQQAK
DETLYWATIEARLQCTSSEENLKEFHLKHDIGDILFLNYKQAMNLPQDPIPFNPDLWTLC
KQEIENTYLKKSAAALVNAATRQSPDFDSHAIALFLKSQWVKKTEKIGCLKIKAGQTIAA
FMQQTVMIYGTMARYMRKFRNQYCPRKIFVNCETTPADFNSFILDEWNFNRTCFSNDFTA
FDQSQDGSILQFEVIKAKFHNIPEDIIEGYIQIKTHAKIFLGTLSIMRLSGEGPTFDANT
EANIAYTHTKFNIPCDAAQVYAGDDMSIDYVASVKPSFNMIEHLMKLKGKPVFNTQTQGD
FAEFCGWTISPKGIIKKPEKMNMSIELQKNINKFHEVKRSYALDHAFAYQLGDELHELYN
ESEAEHHQLATRSLILAGQATALDILDYGLRDLK
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagttcgtgccgctcttgatagaatcactgatccatcggttaaagctgtactc
aacgaagaggcctacagccacatccgaccggttcttcgtgaatccctgactaataatcca
tacgccatcgcacccgatgccgccgacacgctagagaaatatggaattgctactaatcca
ttcgcagtgaaagtacactcccatggggcggttaaaagtatcgaaaacaccttactcgaa
agagttgggtttaacttgccgaaagaaccatgcattttcctcttcctcaaaagaagtaaa
ctgcgttacctcagacgtggaccaagtaacaaagacattttcattaacctagcgatagag
ccccgggacctccaaaggtatgaagaagacactctagttgagagttggactcgtatcacc
actaggtatgcatatattagtgacactttacacttcttcactaggaagatgctggctgac
ctattctttcacaacccagctctagatgtattatacgccaccctagttcttcccccagaa
gcccttcacaaacaccctagcatagaacctgacttatataccattaactacaacttcaat
ggtttccaatacatcccaggtaatcatggtggcggttcttactcccatgaatttaaacaa
ctggaatggctcaaagttggacatctcaaatccccagagctgagtctcaccttccagatg
attgaatctattggtgctaaccacctcttcatgatcacccgtggcattaaaataaccccc
agagttcgaacattcactaaagactcctatgtgctcttccctcaaatctttcaccctcga
aacctcaatccttcaaaaccctttccaaaagttaaagcaatgcaactcttcacttacgtg
aaatctgtcaagaatccaactgagagagacatttatgctaagatccgacagctgatcaag
acttctgagctgtctgattatcatccagatgaaatcgtacacatagtgaattactttgtt
ttcatctccaaattggatagcattaattcttattctgacatactctctcttcctatctgg
tccaaagcattgctgcccatcaaaaccaaaatcacacaactttgggaaaagctcaccgga
gcaagagctttcaaccaacttctagatgcacttcaatggaaaactttcacgtattcctta
gaagtagttgatttttccacggctccctctcagagagactgtttcatggaagatgagaga
ctcgaaactgacacacttgaagatgaagtctcacaaaatgccaataacaataaaccaaca
agcttgcaaaatattgaagaggccgtcaagaacaatccagacctcccctgggccccgtgg
ttactcattctacaagctcacaatgctgactgtacccaaaaacaatatgatcctgaaaac
aacctcattctacccatacaggagatcaacactctccccaaacaccaacaccctgacatc
ccaactgaccttctaacacttctaaccaaactacacagagagccaaccactgtcccactt
gacaaccacagagctcgcgcctatggatctgatgtaaaaaatctacgaataggcgcactt
ctcaagaagcaaagtaaagactggttggctagcttcgctctcaaaactgagaacatcgaa
cgccaagttttaatgtctgtcatccatggcgctggcgggtctggcaaatctcatgctatc
caaacttggatgcgttccttaaaccggagagaccgtcacgtcaccataatcttacccaca
acagacttgcgcaatgattggactaccaaagtacccaacctggaacaagccaatttcaaa
actttcgaaaaagcactctgccaaccctgtggaaagatcatagtgtttgatgactactct
aaacttccccaaggctacattgaagcattccttgccataaaccagaacgtcattttagcc
atcctcactggagattctaaacagagtttccatcatgaatccaatgaggatgcttataca
gccactctggaacccagtattaacacctaccaacccttttgccgctattatttgaacatc
actcaccgaaacaaaccagacttagccaacaaattgggtgtctactcctgctccagtggc
actacatcattcactatgtcatcacaagccctcaaaggcatgcccattctttctcccagc
ataatgaagaaaactgctcttggtgaaatgggccagaaaagcatgacatacgctggatgc
caaggtctcacaactaaggcagtccaaattcttttggacactaacacacctttgtgcagc
tccaatgtcatatacacagccctcagtcgcgctgttgatcatattcatttcattaacact
ggacccaactcaacagacttctgggagaaacttgattccacaccttacctcaaaaccttc
ttagactgtgttcgagaggaaagaatgaatgaaattgtcgcagtagaagaaccacccgct
ccagtacctgctcctaccacccacttcccaaaagtcaaccctaccacagtgattgaatca
tatgtccatgatctccctgaaaaacatggtagagagatcttttctgaaactcatggccac
tcaaatgcaattcaaactgacaaccctgtggtccaactctttcctcatcagcaggctaaa
gatgaaactctttactgggccaccattgaggccagattacaatgtacttcatcagaagaa
aacctcaaagaatttcatctcaaacatgacattggtgatattctcttcctcaactacaaa
caagccatgaatcttcctcaagaccccatacctttcaacccagacctctggaccctttgc
aaacaggaaattgagaacacgtatctcaagaaaagtgctgctgcccttgttaatgccgcc
actcgacaatcacctgattttgattcccatgcaatagcgctcttcctgaaatcacagtgg
gtcaagaagaccgagaagattggttgccttaaaattaaagctggccagaccattgctgct
tttatgcaacaaactgtcatgatttatggtacaatggcccgctacatgagaaaattcagg
aaccaatattgcccaaggaaaatctttgtgaattgcgaaaccactccagccgacttcaac
tcattcatccttgacgagtggaatttcaatagaacttgcttttccaatgacttcactgca
tttgatcaaagtcaagacggttccatcctccaatttgaagtcatcaaagctaaattccat
aacattccggaggacatcattgaaggctacattcaaatcaaaacacatgcaaaaattttc
ctgggcactctcagcattatgagactctctggagaaggccccacctttgatgccaacact
gaagcaaacattgcctatacacacaccaaattcaacataccatgcgatgccgcacaagtg
tatgctggcgatgatatgtccatcgattacgttgcctcagtcaagcccagcttcaacatg
attgaacatttgatgaaactcaaaggtaaacccgtcttcaacacccaaacccaaggggac
ttcgctgaattctgtggctggacaatctcaccaaaaggtatcatcaagaaacctgagaaa
atgaatatgagcattgaacttcaaaagaatatcaataaattccatgaagttaaaagaagt
tatgctcttgaccatgccttcgcataccaacttggtgatgaattgcatgaactgtacaat
gagagtgaagcagagcatcaccaacttgccacaaggtctctcattctagctggtcaagcc
acagccctagacattcttgactacgggttaagagaccttaagtag
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integrated database retrieval system
