Viruses: 9480576 Help Entry 9480576           CDS       T40000                                  Symbol BiMV_gp1 Name (RefSeq) Bidens mottle virus; polyprotein Virus 433357  Bidens mottle virus Taxonomy SSDB OrthologParalogGFITVOGVOG cluster Motif Pfam:  Peptidase_C6 Potyvirid-P3 Poty_coat RdRP_1 Poty_PP Peptidase_S30 Peptidase_C4 Helicase_C DEAD ResIII Flavi_DEAD Cas3-like_C_2 Motif Other DBs NCBI-GeneID:  9480576 NCBI-ProteinID:  YP_003778191 RS:  NC_014325 UniProt:  Q80RJ9 LinkDB All DBs Position NC_014325:134..9349 Genome browser AA seq 3071 aa AA seqDB search MATNFSTIHFGSFQCKIQHPAVSVSVVAKQPPPPRTQQPCDPFAKLEEKLEAYFDKRKYA TIKKLKNGTFVYKHKTDAQIKRIKAAEARKEQELFSFKTSPPTIISSISIGGGLQPSAMP MEAQTHKKIHTTPSARKRCVLKKVSLTDTQLLNLVKQVKNIGVDKNLTIEVIGKRRNVIR YKDFRTNVGAFIEVRHELGKRARVDLRIPNSNIPFVQILAKTNAWGMKVKTLDLRRGDSG VILNPKKLHGKQGRSAHDMFIVRGNCEGQVFDARSRVTFSVMSRMTHFSLAENFWRGLDT NWAKYRKSVSHTCTADFSVSDCGNVTAILTQSLTPCFKLTCGRCAQAFVNLTFKEACRSL HEGATEGILHLDENASNFHHTKRMLEVVRELSSEVSVEDSYFDEIFRMIGSRTQSPFTHL NALNNFFLKGKTNTTEEWRLASENLLELARFQKNRTDNIKKGDLASFRNKLSAKANYNYH LFCSNQQDKSASFIWGQREYHAKRIFTQYFQEIDPALGYTAYQKRRLPDSIRELATGNLI VSMDLASFREQMRGKDTQQGGVTKSCTSSKDGNFLYPCCCVTQDDGTPVLSTVYPPTKKH MVVGNSGDSKYVDMPKGESELLYMAKDGYCYLNIYLAMLVNIKEEEAKDFTKRIRDSYIP KLGMWPTLLDLATTCAQLRIFYPDVHDAELPRILIDHKNQICHVVDSFGSISTGYHILKA STVAQLVLFADDNLESDIKHYRVGGRLSTPPPDHANNLSDFPADSSATPFAMSEFAATKL LIKGVFRPNLMKRLLLEEPYIMMLSLVSPGVLMAMYNNGAFEMAVQLWINDRQSIATIAV MLSNLAKKVSLADTLMQQKTIIDSSASDLLNNSFDGFQLYMTYHTSTLLLQRMRARYEGD QPLVAQGFMNYERDVIKLMEKNYLDLLEESWRELSWREKFQSIWHARKSSRHFTENLKPA KAADFNGMYDISPRAYFTKVLNHTQDRIKTTKQAISVYVDRKCVSVTTFLIRRILNRLPN LITIFNSLIVFSVLLSIAATLHHIITQHRSYQKQLLGMEQMSDEAASMEIYNNLQRKLER NPTWDEFIQMAEVVNPSLAKKLMKYEQPDNVSHQGSTEDTKQIEQIIAFVTLVLMTFDAE RSDCVFKTLNKFKGTVSSLNSTVRHQSLDDIIGDFDERNGMIDFDLNDNIHNVSSQTDET FGRWWVHQTERGHTIPHYRTEGLFMEFTRANAARVASDIIQSTHTDFLIRGAVGSGKSTG LPFHLSNHGEVLLIEPTRPLTENVYKQLSGNPFFLKPTIRMRGCSVFGSSPVSVMTSGFA LHYFANNSDQLNNFKYIIFDECHVLDASAMAFRSLISVYHPTCKVLKVSATPPGREVEFT TQFPVKLVVEENLSFNSFVNALKTLSNADVLKYGSNILVYVASYSEVDNLSKMLTDKGMK VTKVDGRTMKHGSLEITTSGTTTQPHFVVATNIIENGVTLDIDVVVDFGMKVSPFLDVDN RSIVYNKVNISYGERIQRLGRVGRFKEGTALRIGSTEKGLIEIPSMIATEAALYCFAYNL PVMTSNASTSIISECTVKQVRTMHQFELNPLFMFNFVSCDGTMHPMIHETLKKYKLHDSI TPLCEQSIPYKASGKWLSVRCYEQIGVRIDACKDVKVAFHIKDIPPPLHEELWNIILKFK HTALFPTIKTSSISKIAYTLQTDIHSISRTLARIDLLLEDERTKQAELQSLVSNNCTNMY SILGIANTLRARYSQDYTGENIRKLEAAKSQLREFNNIRGSADELNIIGNFEALQYVHHQ SKESLASAMNLKGIWAKSLVARDLLVAGAVAIGGIAILWKWFRSEISLVRHQGYSKSKKI KALKFRKARDKRAGFEIDGNDDTLEEYFGSAYTKKGKGKGTTIGMGKSHRKFINMYGFEP GEYSYIRFVDPLTGAQIEENVYADILDVQKKFGDIRTQKIIDDELEPQATYSNQSIHAYF IKDWSNKALKVDLTPHNPLLVSERASLIMKYPEREGELRQTGQGVEVDISEIPKGEASHE SKSLLRGLRDFNPVATVVCKLIAKTDMGIKSMHGIGFGSYLIANHHLFKTFNGALEVHTH MGIFKAPNMTSLQVFPLQGRDLIIVKMPKDFPAFPQKLHFRGPRANERVCMVGSNFQNKS ISSTVSETSPTHPIQRSTFWKHWIDTNDGQCGLPIASTHDGSILGLHSLANNNTSENYFV AFDDEFEEKHLRTSEHTEWVKNWKYNPDKVLWGSLQLKEDKPNGLFKTTKLVSDLHESTS VREQGENTRWMYNALENNIIATNYLQSQLVTRHVVKGECMHFSMFLSQDKEAAQFFKPLM WAYGKSKLNTEAYIKDLMKYSEPIEVGVVDADAFEEAVVRVILYLKMKGFRKCAYITDED AIFQALNMKAAVGALYGGKKQDYFKDFTQQDREQILRDSCFRLYKGSLGVWNGSLKAELR CKEKIDANKTRTFTAAPIDTLLAGKVCVDDFNNNFYAKNIECCWTVGMTKFYGGWNKLLT ALPNDWLYCDADGSRFDSSLTPYLINAIITIRSAYMEEWDIGEQMLRNLYTEIVYTPIST PDGTIVKKFRGNNSGQPSTVVDNSLMVVLAMHYAFVREGIPYCEIEDICKFFVNGDDLLI GVNPEHEEILDRLGGHFSDLGLNYDFSSRTRDKSELWFMSHRGLKCEGIYIPKLEEERIV SILQWDRATTPENRLEAICAAMIEAWGYPELIHQIRRFYKWLLEQEPFATIASEGNAPYI SSLALRRLYLNEHIEDDELEAYLKTFAELDDEFECDTFEVHHQAKDEEKIDAGDPAKKKE QIPPPENKAITKGKDKDINAGTSGTMTVPRIKAITAKMRLPKARGSVVLNLDQLLEYRPQ QVDLSNTRATQEQFSLWYEYVKNSYDVSDTEMATLMNGLMVWCIENGTSPNINGEWVMMD GESQVTYPLKPVIEGAKPTFRQIMAHFSDVAEAYIELRNTKEAYMPRYGLIRNLRDMSLA RYAFDFYEITSRTPNRAREAHIQMKAAALKSAQSRLFGLDGGISTQQENTERHTTEDVNS DMHTLLGVRNM NT seq 9216 nt NT seq  +upstreamnt  +downstreamnt atggcaaccaacttcagcacaattcactttggttcatttcagtgcaagattcagcatcca gctgtttcagtctctgttgtcgccaagcaaccaccaccaccacgcactcaacaaccgtgt gatccgttcgcgaagctcgaagaaaaactcgaagcatattttgacaagcgaaaatatgct acaattaaaaagctcaagaatggaacattcgtgtacaagcacaagactgatgcgcaaatc aaacgcatcaaagcagcagaagctcgcaaagagcaagagcttttctcgttcaaaacttca ccacccacaattataagctcaattagtattggtggtggtttacaaccatcagcgatgccg atggaagcgcaaacccacaagaagatccacactaccccaagtgcacggaaaaggtgcgtt cttaagaaagtgtcgctgaccgacacacaattgctaaatctagtgaaacaggtaaagaac atcggcgtagacaaaaacctcactattgaggttattggaaagaggcgaaacgtgatacgc tacaaggacttccgcactaacgttggagctttcatagaggttcgacatgaactcggcaag cgtgcacgtgtggatttaaggattccaaattccaacataccatttgttcaaatccttgca aagaccaacgcctggggtatgaaggtcaagacgctagacctgagaagaggagacagtggg gtcattctcaacccgaagaagttacacggaaaacaaggtagaagtgcacacgacatgttc atagttcgtggaaattgtgaaggtcaagtgttcgatgctaggtctcgagttacgttctcg gtaatgagtcgtatgacacacttctcactcgctgagaacttttggcgagggttagacaca aattgggcaaagtatcggaaatcagtttctcatacgtgcacagcagacttctcagtttct gattgtggcaacgttactgccatactcacacaaagtttaactccgtgtttcaagttaaca tgtgggaggtgtgctcaagctttcgtcaacttaactttcaaggaagcatgcaggtccttg catgagggtgcaactgaaggaattttgcatctagatgaaaatgctagcaactttcatcac acgaaacgcatgttggaagttgtgcgcgagttatcttcagaggtgtcagttgaagacagt tacttcgatgaaatttttcgaatgattggatcccgcacacaaagcccattcactcactta aacgcattgaacaatttcttccttaaaggaaaaacaaatacaacggaggaatggagactc gcttcggaaaacttactagaattagcgcgttttcagaaaaatcgaactgacaacataaag aaaggggatttggcatcttttagaaacaagttgtcagcaaaagcgaactacaactaccat ttgttctgtagtaatcaacaagacaagagcgcaagttttatttggggtcaacgtgaatat cacgcgaagaggattttcacccagtattttcaagaaattgacccagctctcgggtacacc gcctatcaaaaacggagactcccagacagcattcgtgaactggcaactggaaatttaatc gtttcaatggaccttgcgagcttcagagaacaaatgcgaggtaaagatacccaacaaggg ggcgttacaaagagttgcacaagctctaaagatggtaactttttgtatccatgttgttgt gttacacaagatgatggaacaccagttctttccacagtatatccaccaacgaaaaagcac atggttgtcgggaattctggggattcaaagtatgtggacatgcctaaaggagagtcagaa ttactttacatggctaaggatggatattgctatctgaacatatatctcgccatgttggtt aatatcaaagaagaagaagcaaaggatttcacaaagagaattcgagattcgtatatacca aaacttggaatgtggccaacattattggatctagccacaacctgtgctcagttgcgaatc ttctacccagatgttcatgatgcggaactaccacgtattttgattgatcacaagaatcaa atttgccacgtggttgactcatttggatcaatctcaactgggtatcacattcttaaggca tctacggtagcgcaactcgtgttattcgctgacgacaatcttgaatcagacataaagcac taccgcgttggtggaagattgtccacaccaccgccagatcatgcaaacaatctgtctgac tttccagctgattcatctgcaactccttttgcaatgagtgaatttgcggccacgaagctt ctcattaagggcgtttttagaccaaatctcatgaaacgcttattgctagaagaaccgtac ataatgatgttatccttggtctcaccaggtgttctcatggctatgtacaataatggagct tttgaaatggctgtacaattgtggattaatgaccgacaatcaattgcaaccatagccgtg atgttatcaaatcttgcaaagaaagtgtctttagcagacacactcatgcagcagaaaact atcattgacagctcagctagcgacctattgaataattcatttgatggttttcaactttac atgacttaccacacatcaacacttctgctgcaacggatgagagctcgctatgaaggagat caaccgcttgtggcacaaggattcatgaattacgaacgagacgtaatcaaacttatggaa aaaaattatctcgatctcttggaagagtcatggagagagttaagctggcgggaaaaattt caatcaatctggcatgcacgaaaatcaagtcggcatttcaccgaaaatttgaaacccgca aaggccgcagatttcaacggaatgtacgatatatcaccacgtgcatatttcacaaaagtt ttgaaccatacacaggatcgcatcaaaaccacaaaacaagcaatttcagtatacgtagat agaaagtgtgtgagcgtcacaaccttcttaattaggagaattttaaataggttacctaat ttaatcacaatatttaatagtttaatagtttttagtgttttacttagtattgcggcaact cttcatcatatcatcactcagcataggagctatcaaaaacaactgttaggaatggaacaa atgtcggatgaagctgccagcatggagatttacaataaccttcagcgcaaattagagagg aaccccacttgggatgaatttatacagatggctgaagttgtcaatccttcgcttgcaaag aagcttatgaagtacgaacaacctgataacgtctctcaccaaggttcaactgaagatacg aagcaaatagaacaaatcatagcatttgtcacactggtgttaatgacgtttgatgcagag aggagtgactgtgtgttcaaaactttgaataaatttaaaggaacagtttcttcgttgaat tccactgtgcgacaccaatcccttgatgacatcattggagatttcgatgaacgaaacggg atgattgattttgatctcaatgacaacatccataatgtaagctcccagaccgatgaaaca tttgggagatggtgggttcatcaaacggagcgaggtcatacaatcccacactacaggact gagggcctctttatggagtttacacgtgctaacgctgcgcgggtcgcgagtgacatcatt caaagtacacatactgatttcctaatacgaggagccgtggggtccggaaagtcaactggt ttaccattccatcttagcaaccacggtgaagttcttcttatagaaccaacacgcccactc acagaaaatgtgtacaagcagttgtcgggaaatcctttctttctcaagccaacaatacgc atgcgcgggtgtagtgtttttgggtcatcaccagtatcagtcatgacaagtggatttgca cttcattattttgcaaacaatagtgaccagctcaacaatttcaagtatattatctttgat gaatgtcatgttctggacgcttcggcaatggcatttcgaagcctgatatccgtctaccat ccaacttgcaaagttttaaaagtgtcagcaacaccacctgggcgagaggttgaatttaca acgcagtttccagttaaacttgttgtagaagaaaatctttctttcaacagttttgtcaac gcattgaaaacgcttagtaatgcagatgtactgaaatatgggagcaatattttggtttac gttgcaagttatagtgaagtggataacttgagtaagatgttgacggacaagggtatgaaa gttaccaaggtcgatggaagaactatgaagcatggtagcctcgaaattacaaccagcgga acaacaacacagcctcattttgttgttgcaacaaacatcattgagaatggagttacgctt gatattgatgtcgtagtcgattttggaatgaaagtgtcaccattcttggacgtggataac agaagcatagtatacaataaggtgaacataagttacggggagagaatccaaaggctcggc agagttggacgctttaaagaggggaccgcattgcgaattggttcaacggagaagggattg attgaaattcctagtatgattgctactgaagcagccctatattgctttgcgtacaatttg ccagttatgacaagcaatgcttccaccagcatcatatctgaatgcactgtgaaacaagtt cgaaccatgcaccagttcgagctaaatcctctttttatgttcaattttgtctcatgtgat ggtactatgcatccaatgattcatgaaacgttgaagaagtacaagttacatgactcaatt acaccactctgcgaacagtcaattccatacaaagcgtccggcaaatggttgtctgttaga tgttatgagcaaatcggagtacgtatcgacgcatgcaaagatgtaaaggtggcctttcat ataaaggacattccaccaccactacatgaagaattgtggaacattattctcaagttcaaa cacacagcgttgttcccaacaatcaagacgtcttcgatcagcaaaattgcctacacgttg caaaccgacatccattctatatctagaacacttgctcgcattgatctattgctagaagat gagcgaactaagcaagcagagttgcaaagcttagtatctaataattgcacaaacatgtac tccatccttggtatagcaaatacactccgtgcacgatactctcaggattacacaggtgaa aatatcaggaagctggaagctgctaaatcccagctacgagagttcaataacatccgtgga tcagcggatgaattaaacattattggtaattttgaggcattacagtacgtgcatcatcaa tcaaaggagagcttagcaagcgccatgaatctcaaaggaatttgggcaaagtcactagtt gcacgtgatttacttgttgcaggcgctgtagctattggtggaatagcaatactctggaag tggtttagatctgaaatttcgctcgtacgacaccaagggtattcaaaatctaagaagatc aaggcgctcaagttcagaaaagctcgagacaaacgtgctggattcgagattgatggtaat gatgacactcttgaggagtattttggatcagcttacaccaagaagggtaaaggcaaaggt actacaattggaatgggaaagagccatcggaaattcatcaacatgtatggatttgaacct ggcgaatactcatacatacgcttcgtagacccattgactggagcacaaatcgaggaaaac gtgtatgctgatattttagacgttcagaaaaagtttggtgatattcgcactcagaagatc attgatgacgagttggaaccacaagcaacctacagtaatcaaagcattcatgcgtatttc ataaaggattggtccaataaagcgctgaaagtagatctcacaccacacaacccgctcctg gtgagcgaacgtgccagccttatcatgaaatacccagagagagaaggtgagctacgacaa actggccaaggtgttgaagttgatatttctgaaattccgaaaggagaggcaagtcatgaa tcaaaatcattgctacgaggcttgagagacttcaaccctgtggcaacagttgtttgtaag ttaatagccaaaactgacatggggattaagagtatgcacggaattggcttcggctcatac ttaattgcaaatcaccatctgtttaaaacctttaatggagcacttgaagtccatacccat atgggaatttttaaagcaccaaacatgacgtccttacaggtatttcctctacaaggtcga gatttaataattgtgaagatgcctaaggacttcccagccttccctcaaaagttgcacttc cgcggacctagggctaatgaacgagtatgtatggttggttcaaacttccagaataaatca atctcatcgactgtatccgaaacgagtcccacacatcctatacaacgaagtacattttgg aagcactggatagatacgaatgatggccagtgcgggttgccaatagcttcaacccatgac ggaagtattctcggcttacatagccttgcaaataacaacacgagcgagaattactttgta gctttcgacgatgagtttgaggagaaacatttgcgcacgtctgagcacacggaatgggtc aagaactggaaatacaatccagacaaggttttgtggggttctttgcagttaaaagaagat aaacctaacgggctatttaagaccacaaagcttgtttctgatttgcatgaaagcacctcg gttcgcgaacaaggagaaaacaccagatggatgtataacgctcttgagaacaacatcatt gccacaaactatttgcagagtcagctggtaacaagacatgtggtgaaaggagaatgtatg catttctcaatgtttttgagtcaagacaaagaagcagcacaattcttcaagccactgatg tgggcgtatggaaagagtaaactgaacactgaagcatacatcaaagatttaatgaagtat tccgaacccatagaggttggagttgtggatgcagatgcttttgaagaggctgttgttcgt gttatattgtacctcaaaatgaaaggattcagaaagtgcgcttacattacagatgaggac gcaatatttcaagctttgaacatgaaggctgcagtcggagcattgtatggtggtaaaaag caggactacttcaaagatttcactcagcaagatagagaacaaattttgcgtgacagctgt ttcagactctacaagggatctttgggggtgtggaatggttctttaaaagctgagttacgg tgcaaagaaaagattgatgccaacaagacgagaactttcacggcagcaccaatagacaca cttttggctggaaaggtatgcgtggatgattttaataacaatttctacgccaaaaacatt gaatgctgctggacagtcggaatgacgaagttctatggaggctggaacaaattactcaca gcactaccgaacgactggctttattgtgatgcagatggttcacgatttgacagctctctg acaccatatttgatcaatgctatcattaccatcagaagtgcatacatggaagaatgggac atcggtgaacaaatgttaaggaatttatacactgaaattgtgtatactccaatctcaaca ccagatggcacaatcgtgaagaagttcagagggaacaacagtgggcaaccatcaacggtg gtagacaactcgctaatggtcgtcctagctatgcattatgcttttgttagagagggtatt ccctattgtgaaattgaagacatctgtaagttctttgtcaatggagatgatcttctaatt ggtgtaaatccagaacatgaggaaatcttagaccgtctcggaggacatttcagtgactta ggtctcaactatgatttttcctctagaacaagagacaaatctgagctatggtttatgtca cataggggtcttaaatgtgaagggatttacataccaaagctcgaagaggaaagaattgtc tccatactccaatgggaccgcgcaacaacaccagaaaacaggctagaggcaatctgcgca gcaatgatagaagcatggggctatcctgagttaatccaccagatcaggcgattttacaaa tggttattagaacaagagccatttgccacaattgcttcagagggtaatgcaccatacatt tcatctttggccttgaggaggctgtatcttaacgaacacattgaggatgatgagttagag gcatacctcaaaacatttgcggaactggacgatgagtttgaatgtgacacttttgaagtt caccatcaagcaaaagatgaagaaaagatcgatgcaggagatccagcaaagaaaaaggag caaattcctcctcctgagaataaagcaataaccaagggaaaagacaaggatatcaatgca ggaacttcaggaacaatgacagtgccacgtattaaagctataacagccaaaatgcgtttg ccgaaggccagagggtcagttgtccttaacttggaccagttgctggagtatcgacctcaa caagtagatttgtcaaacactcgagcaacgcaagaacaattcagtctgtggtacgagtat gttaagaactcgtatgatgtctccgatactgaaatggcaacactcatgaatggactaatg gtgtggtgcattgaaaatggaacatcacctaacattaatggagaatgggtgatgatggac ggagaatcacaggtcacataccccttaaaacctgtgatagaaggagccaaaccaaccttt cgacaaattatggctcacttctccgatgtagccgaagcatacatcgaactgcgtaacaca aaagaggcgtatatgccacgatacggcctcattcgaaatttgcgagatatgagtttagct cgttacgcatttgacttctatgagataacttctcgcacacccaaccgagcacgtgaagca catatacaaatgaaagcagcagcacttaaatctgcacaatcacgtttgtttggcttggat ggtggcatcagtacacaacaagagaacacagagaggcatactacagaagatgtaaactct gatatgcacacactacttggagtgcgcaacatgtaa

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