Viruses: 949156
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Entry
949156 CDS
T40000
Symbol
GvEgp1
Name
(RefSeq) Garlic virus E; hypothetical protein
KO
K26615
Alphaflexiviridae RNA-directed RNA polymerase
Virus
150285
Garlic virus E
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Vmethyltransf
Viral_helicase1
RdRP_2
AAA_16
AAA_22
AAA_30
Motif
Other DBs
NCBI-GeneID:
949156
NCBI-ProteinID:
NP_659010
RS:
NC_004012
UniProt:
Q8QXW5
LinkDB
All DBs
Position
NC_004012:99..4772
Genome browser
AA seq
1557 aa
AA seq
DB search
MTTVQKLLDQISDPSARAAYSQDCLSAAKTAATKAMTIAPYAVTPTEALTLERIGITTSP
FATTSHTHAADKIIENDCLDIIGRYLPKEPVTLIQLKRAKLHLLRRGPSGDIFKNYCHEP
KDVLRFGLTNPHTCPQVDTACAVISDTLHFMSTHQVWTLFQNNPKLERLYGTLVLPVEAL
HKLPSLFPEIYKLEYYERHFAYMPGGYGGGAYIHSYGTLKWLSTAQIGPGAYPGYRPPAN
GRRPLLDHLSIEKIETKAAHHIVMIQRRRPELPWPLPPIWVFHASDYVKLPEIFYPAEAN
VQKAYPHTFIKRLQLYCFSVKAVSLRDIFAKIRQVIPTEELARFSTADLIRLANYLLFIT
GMQSASDYQSPLMESLLGKLCLSIRARVREFFQNILGKSSYAALLTVTDVRPIHFTTKPQ
RRGICGEQWFDNPEEDEAGPPNNSLTGYPQPSPDDLDLLAEFEGHAMNPKTLSNNTRGRN
DFPECPVADTTAMNEEDTRRSHYEEHAKQATTTPNTEAPKEALTSDQEGYVTDWSDDESS
SSVKPPESEGAPLEDDDLFDLPPLEDCADPVEADAQEHPDEVSVDLPSPDSDHAHTGERT
LETPEDSVTGEAQNCDGSRHIDEPEERGQPSKQTCKVELTPLDADTVELLKLHGFTNYRA
QYDGESQIQPIYRNPHAHFLRQYDAQTTTHQQQFVDMAHGLKRRCYGYKVDAKRATAFMS
DVKNNLTGLVLPKLDRDLLSSWVALAENATRTVGLIVIHGAGGAGKSRALQELLRNRVVD
ANEVNIVVPTINLAADWKKKLPALDPRRVMTFEKACEREGKSVVIMDDYGKLPAGYVDAY
LAIKSNVELIVLTGDQRQSVYHNDKRDSQIALLSPNTEHFKRYCDYYVNATHRQPRRLAN
PIRVHAEREVGGAVKHATLIPTNAMTLVPAFRSQSLLTDLGRQAMTYAGCQGLTLPHLTI
VLDKDTPLCSDEVLYTALSRASETITFVNTHSDNKEFLAKLDATPYLKTLISGVREDEQS
GGDYQPPEPQVRDGPTKTHMPVANNNIQLEEKIETMEDKDTRELWSGEEKTNLMQTQDPV
VQLFPHQQSKDEALFKITIKERIRTADVGTNKKALCETLSAGDLLFEAYAKFMNVPQETQ
PFDKRLWAHCKQLALRTYLSKPTTNLQQGAQRQDPDFPDNAIALFNKSQWVKKLEKVGCK
FKAGQTISAFKQSTVLLTTTMALYLRKKREGHQPDNVFVMCEKTPEQFDSFVLTKWDFSR
PNYTSDYTQYDQSQDAAFLNFELRKARHFGIPNEVVDFYAFIKTHAKTFLGNLAIMRLSG
EGPTFDANTECNIAYDALRFQVDSTVNACYAGDDLVRDKACEERPGWKYAEPLFSLKAKP
LVTNKPDFCGWRLTKFGIVKSPVQLYQSLQLALRLGKVEEVKRSYAIDYLFAYRLGDQLY
DVFDENEMEKHQLVTRTLIKKGMRPPSSGDHLPVFHVTSDRLIRDPKAKHISTYEYDSTS
LPFNIVEDHFAYNPNRADRDDMNMARDSQSHETSNASNFPPAREPLLSDLFPQLSSL
NT seq
4674 nt
NT seq
+upstream
nt +downstream
nt
atgaccactgtgcaaaaactcctcgaccaaatttctgaccccagtgcgagggctgcatat
tcacaagattgtctttctgctgccaaaacagcagcaacgaaagcaatgactattgcacct
tatgcagtcactccaacggaagccctcacgttggaacgcattggaatcaccacttcccca
ttcgccaccacctcccacacccatgcggccgacaagatcatcgagaacgactgcttagac
attatcggacgctacctaccgaaagaaccagtaacgctgatccagcttaaaagagctaag
ttgcacctgcttagaagaggccccagcggcgacatcttcaagaattattgccacgaaccc
aaagacgtgttacgcttcggcctcacgaaccctcacacttgcccacaggttgacacagcg
tgcgctgttatctctgataccctgcactttatgtcgacccaccaggtgtggactctcttc
caaaataatccaaagttagagcggctgtacggaacccttgtcctaccagtagaagctcta
cataaacttcctagcctcttcccggaaatatacaaactagaatattacgagcgacacttc
gcgtacatgccgggaggatatggtgggggagcgtacattcactcctatggtaccctcaaa
tggctcagcaccgcgcaaataggaccaggcgcatacccaggctatagaccaccagcaaac
ggacgaaggcctttgctagaccacctcagtattgagaaaatagagactaaagcagcgcat
cacattgtgatgatccaacgccgcaggcctgagctaccctggcccctaccacccatctgg
gtgttccacgcttcggactatgttaaactacccgaaattttctacccagccgaagcgaac
gtgcagaaggcctacccccacacattcattaaacgactgcaactatactgcttctcagtc
aaagcagtctcacttagagacatcttcgctaagatacgacaagtaatcccgactgaggaa
ttggcgagattctcgacagcagacctcatacggttagccaactatctgctgtttataact
ggcatgcaatcggccagcgactaccaatcaccactgatggagagcttactcggtaagcta
tgcctgtccattcgagcgcgcgtgcgggaatttttccagaacatccttgggaaatcatcg
tacgccgctctgcttacagtcaccgatgtacgcccaatacatttcaccactaaaccccaa
cgtcgaggaatctgcggcgaacaatggtttgataatcctgaggaggatgaagccggcccc
ccgaacaacagtttaacgggttacccacagccttccccagacgatttggacttgctcgca
gaattcgaaggtcatgccatgaacccaaaaaccctgagcaacaacacacgcggtcgcaat
gattttccggaatgcccagtggcagacacgactgccatgaacgaagaagacaccaggcgg
tctcactatgaagagcacgccaaacaggccaccacgacccctaacacagaggcaccaaaa
gaagctctcacttctgaccaagaggggtatgtgaccgactggagtgatgacgagagttcc
tccagtgtaaaaccccctgagtcagaaggcgcgcctttagaggatgatgacctctttgat
ctcccgccactagaagattgcgcagacccagtggaagccgatgcacaggaacatcccgac
gaggtcagtgtggacctgccatcacctgatagcgaccacgcccatacgggagagcgtacc
ctagaaacgccagaagactcagtgactggcgaggctcaaaactgcgacgggagccgacat
atagatgaacccgaagagagggggcaacccagtaagcagacatgcaaagtagagctcaca
cctctcgacgccgacacagtggagctgcttaaattgcacgggttcactaattacagagcc
cagtatgatggggagagtcaaattcaacccatttaccgcaatccccatgcgcatttcctt
cgacaatacgacgcgcaaaccaccacacatcaacaacagtttgtggacatggctcacggc
cttaagagacggtgctacggttataaagttgacgccaaacgggcaaccgcctttatgtcg
gacgttaaaaataaccttactgggctggtgttaccaaaactggatagagatcttctgagc
tcttgggttgctcttgcggagaacgccacacgaacagtgggcctcatagtgattcatggg
gcaggaggagccggtaagagtcgcgccctacaagaattgttgaggaaccgggttgtggac
gccaacgaggtcaacatagtcgtgcccactataaacctggcggccgattggaaaaagaaa
cttccagccctggacccacgacgtgtgatgactttcgagaaggcctgcgagcgcgaagga
aaatcagttgtcattatggatgactatgggaaactacccgcgggttacgtagacgcctac
ctcgccatcaaatctaacgttgaactcatagtgctgaccggggatcaacgacagtctgtg
taccacaatgacaagagagactcacagatcgcacttctgagcccgaacactgaacatttt
aagcgatactgtgactactatgttaacgctactcacagacaacccagacggctcgccaac
cctatcagggtgcatgcggagagagaagtaggcggagcggtcaagcatgcgacactcata
cccacaaatgctatgacactagtacctgcattccgcagccaatcgctgctcactgacttg
ggcagacaagcaatgacctatgcgggttgccaggggctcacactacctcaccttaccatt
gtgctggacaaggacacgccgctctgctcagatgaagtcttgtacacagcactctccaga
gcgtcggaaaccatcacattcgtcaacacgcactccgacaacaaagagtttttggccaaa
ttagacgcaaccccctacctgaagactttgatatcaggggtgagagaagatgaacaatct
ggcggagactaccaaccccctgagccacaggtacgcgatggccccaccaaaactcacatg
cccgtagcaaataacaatattcaactggaggagaagatcgaaacaatggaggacaaggac
acaagggaactatggtccggtgaagagaaaaccaatctcatgcaaacacaggacccggtt
gttcaactctttccgcaccagcagtccaaagatgaagcgttgttcaagatcactattaag
gagagaatcaggacagccgacgtcgggaccaacaagaaggctctgtgcgaaacgcttagc
gctggagacctgctcttcgaggcgtatgcaaaatttatgaatgtgccgcaggaaacccaa
ccattcgataaacgactctgggcacattgcaaacagttggctttgcgcacttatttatcc
aaacccaccaccaacctgcaacaaggagcgcaaagacaagatcccgacttccctgacaac
gccatagcgctgttcaacaagtcccagtgggtcaagaagcttgaaaaagttggctgcaag
ttcaaggccggacagacaatatcagcattcaagcaatccactgtgctgctgacaaccacc
atggccctctatctacgcaagaagagggagggtcatcaaccggacaatgtgttcgtgatg
tgtgagaagacgccagagcaattcgactcgttcgtcttgaccaaatgggactttagtcga
ccaaactacacatcggactacacccagtacgatcagtcgcaagatgctgcctttttgaac
ttcgagttgaggaaggcgaggcacttcggcatcccgaacgaagtagttgacttttacgct
ttcattaaaacgcacgcgaaaacattcttagggaaccttgctataatgagattgagcgga
gaaggaccaacctttgatgctaacacggaatgcaacatagcgtatgacgccctcagattc
caagtggactccacagtcaatgcatgctatgccggagatgacttggtaagagacaaagcc
tgtgaagaacgcccgggctggaaatatgctgaacctctcttctcccttaaagccaagcct
ttagtcaccaataagcctgacttctgcgggtggagactcacgaaatttggtattgtcaag
tccccagtgcaactttaccaatccctgcaacttgctcttaggcttggaaaagttgaggaa
gtcaaacgtagctatgccattgactacctctttgcctaccggcttggagaccaattgtac
gacgtattcgacgagaatgagatggaaaaacaccagcttgtcactagaactttgataaag
aagggtatgcgaccacccagctcaggagatcacttgccggtgttccatgtgacctctgat
agactcatcagagaccccaaggccaaacacatctccacatacgagtacgacagcaccagc
ttgccgttcaacatcgttgaggaccatttcgcatacaatccaaatcgagctgacagggac
gatatgaacatggcgagggacagccaaagtcatgaaacttccaacgcatccaactttcca
ccggcaagagagccattacttagtgacctctttccccagcttagttccctttaa
DBGET
integrated database retrieval system
