Viruses: 949234
Help
Entry
949234 CDS
T40000
Symbol
SBMVgp2
Name
(RefSeq) Southern bean mosaic virus; polyprotein P2ab
Virus
12139
Southern bean mosaic virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
RdRP_4
Peptidase_S39
RdRP_1
CBL
DUF3868
Motif
Other DBs
NCBI-GeneID:
949234
NCBI-ProteinID:
YP_007438858
RS:
NC_004060
UniProt:
Q09KR4
LinkDB
All DBs
Position
NC_004060:join(503..1729,1729..3390)
Genome browser
AA seq
962 aa
AA seq
DB search
MYHPGRSPSFLITLANVICAAILYDIRMGGYQPGSLVPIVAWMTPFVTLLWLSASFVTYL
YRYARTRLLPEEKVARVYYTAQSAPYFDPALGVMMQFAPSHGGASIEVQVNPSWISLLGG
SLKINGDDASNESAVLGSFYSSVKPGDEPASLVAIKSGPQTIGFGCRTKIDGDDCLFTDN
HVWNNSMRPTALAKAGKQVAIEDWDTPLSCDHKMLDFVVVRVPKHVWSKLGVKATQLVCP
SDKDAVTCYGGSSSDSLLSGTGVCSKVDFSWKLTHSCPTAAGWSGTPIYSSRGVVGMHVG
FEDIGKLNRGVNAFYVSNYLLRSQETLPPDLSVIEIPFEDVETRSYEFIEVEIKGRGKAK
LGKREFAWIPESGKYWADDDDDSLPPPPKVVDGKMVWTSAQETVAEPLNLPEGGRVKALA
ALSQLAGYNFKEGEAASTRGMPLRFVGQSACKFRELCRKDTPDEVLRATRVFPELSDFSW
PERGSKAELHSLLLQAGKFNPTAIPRNLEGACQNLLERYPASKSCYCLRGEAWSFDAVYE
EVCKKAQSAEINEKASPGVPLSRLASTNKDLLKRHLELVALCVTERLFLLSEAEDLHNKS
PVDLVQMGLCDPVRLFVKQEPHASRKVKEGRFRLISSVSLVDQLVERMLFGPQNQLEIAE
WEHIPSKPGMGLSLQRQAKSLFDDLRVKHSRCPAAEADISGFDWSVQDWELWADVEMRIV
LGGFGQKLSIAARNRFSCFMNSVFQLSDGTLIEQQLPGIMKSGSYCTSSTNSRIRCLMAE
LIGSPWCIAMGDDSVEGWVDGAKDKYMRLGHTCKDYKPCATSISGRLYEVEFCSHVIRED
RCWLASWPKTLYKYLSEGKWFFEDLERELGSSPHWPRIRHYVVGNTPSPDKTRLENSSPS
YGEEADKTTVSQGYSEHSGSPGHSIEEAQEPETAPFCCKAASVYPGWGIHGPYCSGGYGS
LT
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgtatcatccaggccgctcaccatcattcctgataacgttagcaaatgttatctgcgcg
gcaatcttgtacgacatccgtatgggggggtaccaaccaggatcactagttccaatagtg
gcctggatgaccccgttcgttacgctgctctggttgagcgcgtcattcgtgacatacctt
tataggtatgctcgaactcgactgcttccagaggagaaagtggccagagtttattatacg
gcgcaatctgcgccttactttgacccggccctgggtgtcatgatgcaatttgcccctagc
catggcggcgccagcatagaagtgcaagttaacccttcgtggattagtctcttaggtggc
tctctcaagataaacggagatgacgcctctaatgagtctgctgtgttgggaagcttttat
tcttctgtgaaacctggtgatgaaccagctagtttggtagctattaagagtggtcctcag
accatcggttttggttgtagaactaagatcgacggtgatgactgcctcttcacagacaat
cacgtttggaataattccatgcgccctaccgctttagcgaaagctggcaagcaggttgcg
attgaagattgggacacccctctctcttgtgaccataagatgcttgatttcgtagtggtg
cgtgtgccaaaacacgtgtggtccaaactaggagtgaaagcgactcaactggtttgtcca
tctgataaggacgctgtaacctgttatggtggatctagttctgatagcttgttgtcgggg
acgggcgtttgtagtaaggttgatttctcttggaagttaacccactcatgccccacggca
gctggctggagcggaactccaatttactctagcagaggtgtggtaggaatgcacgttggg
tttgaagatatcggaaaactcaaccgtggcgtgaacgctttctacgtgtctaactacttg
ttgaggtctcaagagactctacctcctgatctgtccgtcatcgaaatacctttcgaggac
gtagaaacccggagttatgagttcattgaggtcgagattaaaggaagaggtaaggctaaa
cttggtaagcgtgagttcgcttggattccggaatcaggaaaatactgggccgatgatgat
gacgactctttgcccccaccgccgaaggtggtagacggcaagatggtgtggacttcagct
caggaaaccgtcgcagagcctttaaacctaccagagggcggcagggtcaaggcccttgcc
gccctttctcaacttgcaggctacaacttcaaagaaggagaagcagcctctacaagagga
atgccccttagatttgttgggcagtcggcttgcaagtttagagagctgtgtagaaaagat
actccagatgaagtccttagagctactagagtcttcccggaattgtcagacttctcctgg
cctgagcgaggctccaaagcagagcttcactccctgctactccaagcaggaaagtttaat
cccaccgcaatcccaaggaatcttgaaggagcttgtcaaaacctccttgagcgctacccc
gcctccaaatcctgttactgccttcgtggagaagcctggtccttcgacgcagtctacgaa
gaagtctgcaagaaggcgcaatcggcggaaatcaacgagaaagccagtccaggggtcccc
ctctcccgtctcgcctccaccaacaaagacctcctgaagaggcacttagaattagttgct
ttgtgtgttaccgagagattgttcttactcagtgaagctgaggacctgcacaataaatcc
cctgtggacctagttcagatggggttgtgcgacccagttcggctgtttgtcaagcaggag
ccccatgcttcccgaaaggtgaaggagggtagatttcgcttgatttcatccgtttcgctg
gtggatcagcttgtagagcgaatgcttttcgggccccaaaaccagcttgagatcgctgag
tgggaacatattccctcaaaacctggtatgggcctttcgctgcaacgacaagccaaaagc
ttgttcgacgatttgagagtcaaacattctcgttgtcctgcggctgaagccgacatatcg
ggttttgactggtctgttcaagactgggagttgtgggctgatgtagagatgagaatagtt
ttaggaggttttggacagaagttgtccatagccgctagaaacaggttttcgtgtttcatg
aactcagtcttccagctctcggatggcacactcatagaacagcaactgcctggtattatg
aagtctggttcttactgcacttcctcaacaaactccagaatacgttgccttatggctgaa
cttattggttccccatggtgtatcgccatgggtgatgattctgttgagggttgggttgat
ggtgcgaaagacaagtacatgagattaggccacacgtgcaaggattataaaccctgtgca
acatccatttccggtcgcttatacgaggtagagttttgctctcacgttataagggaagat
cgatgttggttggcgtcgtggcccaaaactctgtataaatacttgtctgagggcaagtgg
ttctttgaggatcttgagcgagagcttgggtcttctccccactggcccagaatcagacac
tacgtagtcgggaatactccatcgcccgacaaaactagattagaaaattcaagtccgagc
tatggcgaagaggctgacaaaacaacagttagccaaggctatagcgaacactctggaagc
cccggccactcaatcgaggaggcccaggaaccggagacggcgccgttctgctgcaaggca
gcctcagtctatccaggctggggcatccatggcccctattgctcagggggctatggttcg
cttacgtga
DBGET
integrated database retrieval system
