Viruses: 951226
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Entry
951226 CDS
T40000
Symbol
PepMVgp1
Name
(RefSeq) Pepino mosaic virus; RNA dependent RNA polymerase
KO
K26615
Alphaflexiviridae RNA-directed RNA polymerase
Virus
112229
Pepino mosaic virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Vmethyltransf
Viral_helicase1
RdRP_2
UvrD_C_2
AAA_22
DUF4459
Motif
Other DBs
NCBI-GeneID:
951226
NCBI-ProteinID:
NP_663724
RS:
NC_004067
UniProt:
Q8JSN4
LinkDB
All DBs
Position
NC_004067:87..4406
Genome browser
AA seq
1439 aa
AA seq
DB search
MSRVRNTLEKIRDPQVQSSICEAAYQHVRPVLKESLINCPYALNDYEADTLENLGVTINP
HAIQTHTHAAAKVVENRMLEIVGHHLPKDEKVTFIFLKRSKLRYMRRAAVHKDVFVNHNI
EPKDFFRYDEESTSTSFSVDTRIAYISDSLHFMEPADVTHLFDRCQNLKTLMATVVLPVE
AIHRQTSLFPAIYSINYNEEGFEYIPGSHGGGAYFHKYETLEWLKYSRFIGHDPLTGLKY
TITIQMVESLGANHLFLFQRGNFETPLYRTFQKNSFVTFPNIFHPRHVNATKPMPRSRAI
QLYLYVKSVNKVTQRDIFAKVRQLISTAELELYDPDELTHVVNYFTYVSQLSSINDYDNM
LKSSFFKKLVAPMQHDWRCMIEFFRGKSDFNQLLTALQWKDFSYTIKTEELVITTHTAIG
QAISNAATTYKERRQLTQLVKKGTISLADFEQREPEITYTEFEPETRPQVDCVTNYNNAV
KNLGLSALDEQPQCSSSSSHIPCNEISLAMTDDDNAAAIHEIESLLSEPIIAPQLPALPH
KTWASYASDTSSMKNREIENIIAELEISRKENNVQQTTHDYHAVFDTAQSSGDLPWKAWI
PLLNAHGFKGDQLQYSPDGKVIQPIQDINNKTPRSEYPSSIPADLVNTLRNIKRAVYAIP
ISHRRASAYSSDIKNNRTGKLLCSQSKEWRESFAFKMQHEDIVKSGVVIHGCGGSGKSQA
LQNFLRTLGDSNDCCTVVVPTVELRNDWVNKLCKLPMEHIKTFEKAMIQPGFPVVIFDDY
TKLPPGYIEAYLFHHANTELFILTGDSRQSVYHESNNEAYIASLDEAVAYYANYCGFYLN
ATHRNVRSLANKLGVYSEKEGHLKITFASNALQKCKVPILVPSQMKKSAMQDIGHKAMTY
AGCQGLTAPRVQILLDNHTQHCSDRVLYTCLSRAVDSIHFINTGPNNSEFWDKLEATPYL
KAFIDTYRDEKTEMLNSKPADDSPAEPEAPLTHFPVSNGNNLEKLASALPEKFARELYDK
HHGYSNTIQTENPVVQLFQHQQAKDETLFWATIEARLSITTPEANLREFVLKKDVGDILF
FNYHNVMCLPADPVDFEPRTWEICAAEVKNTYLAKPMANLINAASRQSPDFDANKISLFL
KSQWVKKVEKLGAVKSKPGQTIAAFMQQTVMLYGTMARYLRKMRQRFQPKHIFINCETTT
DNLNQFVKQGWNFNRTAQTNDFTAFDQSQDGAMLQFEVMKAKFFNIPADIIEGYINIKLN
AKIFLGTLSIMRLSGEGPTFDANTECSIAYTATRYHLDSTVKQVYAGDDMALDGVVQEKP
SFKKLQNKLKLTSKTLFPKQVKGDYAEFCGWTFTPGGIIKNPLKMHASIMLQEAIGNLHT
AARSYAIDMKHSYQMGDELHNYLTPDEAEQHFLAVRKLHKLHQGEAMRLGEKSPPKATH
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtgttagaaatactttggaaaagatcagagacccacaagtacagtccagcatt
tgtgaagctgcctatcaacatgttcgacctgtacttaaagaatctctaatcaattgtcct
tacgcgcttaatgattatgaagcagacacccttgagaatcttggtgtcacaattaacccc
catgcaatccaaacacacacacatgccgcagccaaagtagtcgaaaatcgtatgcttgaa
attgttggacatcacttgcctaaagatgaaaaagtaactttcatcttcctcaaacgtagc
aagctgcgttacatgagaagagctgctgtgcataaagatgtctttgtcaatcataacatt
gaaccaaaagacttcttcaggtatgatgaagagtctacatcaaccagcttttccgttgat
acgagaatcgcatacatttcagattctctacactttatggaacctgctgatgtgactcac
ttgtttgaccgttgccaaaaccttaaaacattgatggcaactgttgtactacctgtggaa
gctatacacagacagacatctctattccctgcgatttactccattaactacaatgaagaa
ggctttgagtatatcccaggatcacacggtggtggggcatatttccacaaatatgaaacc
ctagaatggctcaaatactctagattcattggacatgatccattgactggtttaaaatac
accattacgattcaaatggtggagagtcttggtgccaaccaccttttcctcttccaaaga
ggaaactttgagacgccgctatacaggacgtttcaaaagaatagttttgtgacattccca
aatatattccatccccgacacgtcaatgccacaaaacctatgcctagatcaagggccata
cagctgtacttatatgtgaaatcagtaaataaagttacgcaaagagatatatttgccaag
gttagacaactgatttccactgctgagctagaattgtatgaccctgatgaactcacgcac
gttgtaaattatttcacatatgtgtcacaactgtcatctatcaatgattatgacaacatg
ctcaaatccagtttcttcaaaaaactggttgcacccatgcaacacgactggaggtgcatg
attgaattcttccggggaaagagtgacttcaatcaactgctcacagctcttcaatggaaa
gatttttcctatactattaagactgaagagcttgtaattactacacacactgctatagga
caagcaataagcaatgcagctaccacatataaagaaagaaggcagctgactcaattggtc
aaaaaaggtacaatatccttagcagattttgaacagagagaacctgaaataacttacact
gagtttgagcctgaaactaggccccaagtggactgcgttactaattataataatgcagta
aaaaatttaggtctttctgcacttgatgaacagcctcaatgttcatcttctagcagtcat
ataccctgcaatgaaatatccttagcaatgactgatgacgacaatgctgcggccattcat
gaaattgaatctctattgtctgaaccgataatagctcctcaactcccagcattgccacac
aagacatgggccagttatgcttcagacacttcatccatgaagaaccgtgagattgagaac
ataattgctgagcttgaaatctcacggaaggaaaataatgtgcagcaaactactcatgat
taccatgcagtttttgacacagctcagagctccggagatctcccatggaaagcatggatt
ccacttctgaatgcacacggcttcaagggagaccaacttcaatacagtccggatggcaaa
gtgattcagccaatccaggacatcaataacaaaacaccaagatctgagtacccatccagc
attcctgcagatcttgtgaatacactgcgaaacattaaaagagcagtgtatgccattcct
attagccatcgaagggcaagtgcttacagctctgatatcaaaaacaataggaccggcaaa
ttactctgttcccaatcaaaagaatggagggaaagttttgctttcaaaatgcaacatgaa
gacatcgttaaatctggagtagtcattcatggctgtggcggctctggaaaatcacaagca
ttacaaaactttctcagaactcttggcgactctaatgactgctgcacagtggttgtgcca
actgttgaactcagaaatgattgggtgaacaaattgtgtaagctacccatggaacacatt
aaaacatttgaaaaagcaatgattcaaccaggattcccagttgttatctttgatgactac
actaaattgccacctggttacattgaagcctatttgttccaccatgccaacactgaactt
ttcattcttactggagactcgcggcaaagtgtatatcatgagtccaacaatgaagcatac
attgcctcattagatgaagccgtcgcttattatgctaactactgtggattttacctaaat
gctacacacagaaatgttcgcagtttggccaataagctaggtgtttacagtgagaaagaa
ggtcacctcaaaattacctttgcctcaaatgctctacaaaagtgcaaagtgccaattttg
gtgccctctcaaatgaagaagagtgctatgcaagacatagggcacaaagccatgacctac
gctgggtgtcaagggcttactgcaccgagagtccaaattttgcttgacaaccacacacaa
cactgctcagacagggtgctgtacacttgtctctccagagctgtggattccatccacttt
atcaatacaggcccaaacaattctgaattttgggacaagcttgaggcaacaccatacctc
aaagcatttattgatacttacagagatgagaaaacagaaatgctcaattctaagcctgct
gatgacagtcccgctgagcctgaagctccattgactcactttccagtgtcaaacggcaat
aacttggaaaagttagcttcagcgcttcctgaaaaatttgcaagagagttatatgataaa
caccatggatattctaatacaatccaaactgaaaatccagtggtgcaacttttccagcat
caacaagccaaagatgaaacacttttctgggcaacaatagaagctagactttctattaca
actccggaagccaacttacgagaatttgtgctaaagaaagatgttggagatatcttgttt
ttcaattaccacaatgtcatgtgcttacctgccgacccagtggatttcgagccaagaaca
tgggaaatatgtgctgctgaagttaaaaatacatacttagccaaaccaatggctaacttg
atcaatgctgctagcagacaatctcctgatttcgacgctaacaaaatttccctgttccta
aaatctcaatgggtcaagaaagtggaaaaattaggtgctgtcaagtcaaagcctggccag
accattgcagctttcatgcaacaaacagtgatgttgtatgggaccatggccagatacctc
agaaagatgagacaaagatttcaaccaaaacatattttcatcaattgtgaaacaacaact
gataatctgaaccaatttgttaaacaaggttggaactttaacagaacagctcagacaaat
gatttcacagcttttgaccaatcacaagatggtgcaatgcttcaatttgaagtcatgaag
gcaaaattcttcaatatccctgccgacatcattgaaggatacatcaacatcaaattgaac
gccaaaatttttcttggcacattgtccattatgaggttgtctggtgaaggtccaactttt
gatgccaacacagaatgttcaatagcatatactgctacaagataccatcttgattctaca
gtcaagcaggtttatgctggagatgatatggcattagatggagttgtccaagaaaaaccc
tcttttaaaaaactacagaacaagcttaaactcacctcaaagacactatttccaaaacag
gttaaaggtgattatgctgaattctgtggttggactttcactcctggtggtatcattaaa
aaccctttgaaaatgcatgcttccattatgttgcaagaggcaatcggcaatttacacact
gctgccagatcatatgccattgacatgaaacattcataccaaatgggtgatgagctgcac
aattacttaacaccagatgaagctgaacaacacttccttgctgttcggaagttgcacaag
ttacaccaaggagaagcaatgagacttggtgaaaagagccctccaaaagcaacacattga
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