KEGG   Viruses: 956107
Entry
956107            CDS       T40000                                 
Symbol
pol, Siv2gp2
Name
(RefSeq) Simian immunodeficiency virus SIV-mnd 2; pol protein
Virus
159122  Simian immunodeficiency virus SIV-mnd 2
SSDB
Motif
Pfam: RVT_connect RVT_1 RNase_H RVT_thumb RVP IN_DBD_C rve Integrase_Zn gag-asp_proteas Asp_protease_2
Other DBs
NCBI-GeneID: 956107
NCBI-ProteinID: NP_758887
RS: NC_004455
UniProt: Q8Q7J4
LinkDB
Position
NC_004455:<2050..5082
AA seq 1010 aa
FFREYPLGQWQTQELPGDAIDPNGPSNARDGRPSRENAVRLHEERATAESGKQTGKEREG
SIRGSLQLPQFSLWNRPTTVVEIEGQKVEALLDTGADDTVIKDLDLKGNWKPQIIGGIGG
SINVKQFFNCKVTIAGKTTHASVLVGPTPVNIVGRNVLKKLGCTLNFPVSKVETVKVTLK
PGTDGPKIKQWPLSKEKILALQEICSQMEKEGQISKIGPENPYNTPVFCIKKKDGTSWRK
LVDFRQLNKVTQDFFEVQLGIPHPGGLKQCEQITVLDIGDAYFSCPLDEDFRKYTAFTIP
SVNNQGPGIRYQYNVLPQGWKGSPAIFQATADKILQPFRERHPDVVIYQYMDDLFVGSDR
VAPEHSRMIQELRDHLLFWGLETPDKKFQKEPPFEWMGYILHPKKWTVQKVQLPEKEEWT
VNDIQKLVGKLNWASQIYSGIKTKELCRLIRGAKPLDEKVEWTREAELEYEENKLIVQEE
VHGVYYQPEKPLMAKVQKLTQGQWSYQIEQEDNKPLKVGKYARTKNAHTNELRVLAGLVQ
KIAKEALVIWGKLPKFYLPIEREVWDQWWPEYWQATWIPEWEFVSTPHLIGLWYNLLREP
VPGEDVYYVDGAANRNSKEGKAGYVTARNKSRVIALENTTNQKAELEAIKMALQDSGPKV
NIVTDSQYAMGILSAAPDQSDNPIVREIIELMIHKEAVYLAWVPAHKGIGGNEQVDKLVS
RGVRQVLFLEGIDKAQEEHDKYHNNWRALAQDFCIPNIVAKEIVAQCPKCQTKGEPIHGQ
VDTSPGTWQMDCTHMEGKVIIAAVHVASRYLEAEVIPTETGKETAHFLLKLAGRWPVKHL
HTDNGPNFTSEKVATVCWWAQIEHTTGIPYNPQSQGVIEAKNHHLKQIIGQVRDQAEKLE
TAVQMAVLIHNFKRKGGIGEYSPGERIVDIIATDLLTTKLQHNIQKIQNFRVYYREGRDQ
QWKGPAELIWKGEGAVVIKEGTDLKVVPRRKAKIIRDYGKTVDSDPNVEA
NT seq 3033 nt   +upstreamnt  +downstreamnt
ttttttagggaataccccctggggcagtggcaaacccaggaacttcccggcgatgccatt
gaccccaacggcccctccaatgccagggatggaagacccagcagagagaatgctgttaga
ttacatgaagaaagggcaacagcagaaagcggaaagcaaacaggaaaagaaagagagggg
tccatacgaggcagcttacaactccctcagttctctctttggaacagaccaactacagta
gtagagatagaagggcaaaaagtggaggccttactggacacaggagctgatgatacagta
atcaaagatctagatttaaaaggtaattggaaaccacagattattggaggaattggagga
tcaatcaatgtaaaacagtttttcaattgtaaagtaacaatagcaggcaaaactacacac
gcttcagtcctagtgggccccacacctgtaaatattgtaggtagaaatgtgctgaagaaa
ttaggatgtacactaaattttccagttagtaaagtagaaacagtaaaggtaacactaaaa
ccaggaactgacggacctaaaataaaacaatggccattgtctaaggaaaagattttagcc
ttacaagaaatatgtagtcaaatggagaaggaaggccagatctctaagataggtccagaa
aatccttacaacacaccggtgttttgcatcaaaaagaaagatggaaccagctggagaaaa
ttggtagattttagacagttaaacaaagtaactcaggacttctttgaggtgcagttggga
atcccacaccctggaggtctcaaacaatgtgagcaaattacagtactggacataggggat
gcctatttctcatgtcctttggatgaggactttagaaagtacactgcattcaccattcca
tcggtgaataatcagggcccaggaatcaggtaccagtataatgtcctaccacagggatgg
aagggctccccagccattttccaggcaacagcagataaaatcttacagcccttcagagag
agacatccagatgtagtgatctatcaatatatggatgatctctttgttgggagtgataga
gttgccccagaacacagcagaatgattcaagagttaagagaccacctcttgttttggggg
ctcgagaccccagacaagaagtttcaaaaggaaccaccctttgagtggatgggatacata
ctgcaccctaagaaatggacagtgcagaaagtacagcttccagagaaagaagaatggaca
gtaaatgacatccaaaagttggtagggaaacttaattgggcaagtcagatttattccgga
attaaaacaaaagagctctgtagactaattagaggggcaaaacccctagatgaaaaagta
gaatggactagagaagcagaattagaatatgaagaaaacaaactcatagtgcaggaggaa
gtgcatggagtatactatcaaccagagaagcctttaatggcaaaggttcaaaaattgaca
caagggcaatggagttaccaaatagagcaggaggataataagccgctgaaggtagggaaa
tatgccagaacaaagaatgctcatacaaatgagcttagagtgcttgcaggactagtacag
aagattgcaaaagaagctttagtgatctggggaaaactccctaagttttatctgccaata
gaaagagaagtctgggaccagtggtggccagaatattggcaagccacatggattcccgaa
tgggaatttgtatccactccacaccttatcgggttgtggtataacctgttgagagaacct
gtgccaggagaagatgtgtattatgtggatggagcagctaacagaaactccaaagaaggg
aaagcaggatatgtaacagctagaaataaatccagagtaatagccctagagaataccaca
aaccaaaaagcagaattggaggcaataaaaatggcattacaagactcaggaccaaaagta
aatatagtgacagattcacagtatgctatgggtatcctatcggcagcacccgaccaatca
gacaaccccatagtaagagaaattatagaactcatgatccacaaggaagcagtataccta
gcttgggtaccagcacacaaaggcataggagggaatgagcaagtagataaactagtgagc
agaggagtaaggcaagtactgtttttagaaggcatagataaagcacaagaagagcatgat
aaatatcacaataattggagggcattagcacaagacttctgtataccaaacatagtggca
aaagaaatagtagcccagtgtccaaagtgtcaaacaaaaggagagccaatacatggccag
gtagatacatccccaggaacctggcaaatggactgcacacatatggaaggaaaagtaatc
atagcagcagtccatgtagcaagtaggtatctagaagcagaagtaatacccacagaaaca
ggaaaagaaacagcacacttcctgttaaaattagcaggtagatggccagtaaaacatcta
cacacagataatggccctaatttcaccagtgaaaaagtagccacagtctgttggtgggct
caaatagagcacactacaggaattccctacaatcctcagagtcaaggagtaatagaggca
aaaaaccatcatctcaaacaaatcatagggcaagttagagaccaagcagagaaactagaa
acagcagttcaaatggcagtattaattcacaattttaaaagaaaaggggggataggggaa
tacagtccaggagaaagaatagtagacattatagcaacagacctcctaacaactaaatta
caacacaatattcaaaaaattcaaaattttcgggtttattacagagaaggaagggaccaa
cagtggaaaggaccagcagaactcatttggaaaggagaaggagcggtggtaatcaaagag
gggacagacttgaaggtagtaccaaggagaaaagcaaaaatcatcagagattatggaaaa
acagtggatagtgatcccaacgtggaagcttga

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