Viruses: 956339
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Entry
956339 CDS
T40000
Symbol
cp-RT, ScmvsRNA2gp1
Name
(RefSeq) Soil-borne cereal mosaic virus; coat protein readthrough
KO
K27059
Furovirus coat protein readthrough
Virus
100887
Soil-borne cereal mosaic virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
TMV_coat
Motif
Other DBs
NCBI-GeneID:
956339
NCBI-ProteinID:
NP_059146
RS:
NC_002330
UniProt:
Q9IWB0
LinkDB
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Position
NC_002330:208..2592
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AA seq
794 aa
AA seq
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MDKLTRLKGEVDRSLQKAADKVTAESTESLQSKVVVQLPQMAVKNGYTGYNKELNLMASI
HPFIRLGTLISQIEGWQATRASILTHLGVMLNGVSKLGERNFFSRQKRFGTHTQDGDEIF
CDLGGEAVMQIITRLTVSLQSAKGEGSQTRNAMIGTTPTTNQFEGEEQGQTDQTLAISNA
LAEFMTFIHTKDFTTNECYTQDSFEAKFNLKWEGTSXRDGVSGKLRARIVEDFQNRLVLA
DDLGVFPRRNLSGEVIRDEPEIIYAELEDKLLSFESSVYHPKAVTMETEVSVLPKLQTDL
ETGNAEEDIETTVVTEVLIDEESSYFWLYLVFLLLSILISCFIALSRWFICFLGNRGGRG
GPFFRRIATALWSARLWLLSKAARRYGNLGIVRKRYTRAGVRRYLRDYNFQFDEWESVVD
CAPSEALIVADQRMFVRAVNKIVDLKGDFDAIEIVKKTFLNYGVRNYKVERWLNRHTIRS
ALGVLSDVTRREVLTLTDGMLSLENATLDELLGCDVESQRNSMYFKDIVALQFAFRLIGA
PEFSDFVMAYKGTLYRCYVEATKRHTSMLEQFHVSEDQKRRNEKALEWLLMLGQGAFVFS
AAVTAGVTIFKIHKWIKSRMLLRALQMLPSVGGGGNEGGGRFSEEALNRFAASQTPEERI
EALHTDFDTAADDMESFLPEDMQAEIRHVIQAHVDGTYHAADLPFLGDMSDAVVPAMADS
VVDLSNVSSDVGSVDTSVSSVTSKVRRRAVASNTRIYPSVGNVRYSDIKSPRVSGKSGIS
SMKMKITSRPMLAS
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
ctggataagcttacgagacttaaaggtgaggtcgacaggtccttacaaaaggctgcggat
aaggtcactgctgaaagtactgaatcgttacaatcgaaagtggttgtgcagttacctcaa
atggctgtcaagaacggttatacgggttacaacaaggaattgaatttgatggcatctatt
catcctttcattaggctgggtactttgataagtcagattgagggatggcaagcaacacga
gctagcatacttacccatttaggtgtaatgctcaacggtgttagtaagttaggtgagcga
aatttcttctctagacagaaaagatttgggacacacactcaggacggtgacgagatattt
tgtgaccttggaggtgaggcagttatgcaaatcatcaccagactcacagtatcactacaa
tccgcgaagggtgagggttcccagaccagaaatgctatgatagggacgacgccgactacc
aaccaatttgagggtgaggaacaaggtcaaactgatcagacgttagccatttcgaatgcg
ctggctgagtttatgactttcatccacactaaagatttcacgacaaatgagtgttacacg
caagactcttttgaagccaaatttaatttgaagtgggaaggtaccagttgacgggacggc
gtctcgggaaagttgagggcacgcattgtcgaagatttccagaataggctggttttggcc
gacgatttgggtgtttttccgagacgcaatcttagcggtgaggtgataagggacgagcct
gaaataatatatgcagaactagaggacaagctcttgagctttgagagttctgtatatcat
cctaaagctgtgactatggagacagaagtgtctgtattgccgaaattgcaaacggatctt
gaaacaggtaacgctgaagaagacattgagacaactgtggttactgaggtactcatcgat
gaggagagcagttacttctggttatacctcgtatttctcttattgtctatccttatatcg
tgtttcattgcgctgtcgcgatggtttatatgttttctcggtaatagaggagggcgcggt
ggccctttctttcggagaatagccactgcattgtggagcgcgcgactgtggctgttaagt
aaggcggccagacgttacggcaatcttggaatcgtacgaaagagatatacacgtgctggc
gtgcgcaggtacttgcgtgattataatttccaatttgatgaatgggaaagcgtggttgac
tgtgctccgagtgaagctctaatcgtcgcagatcagagaatgtttgtgagggctgtgaac
aagattgtggatttaaagggtgattttgatgctattgaaattgtcaagaagactttcctg
aattacggagtccgcaattacaaagtggaaagatggttgaacaggcatacaatacgctcg
gcacttggtgtactgagcgatgttacgaggagagaagtacttacattaactgatggtatg
ctatcattggagaacgctacgcttgatgagttactggggtgtgatgttgagagtcaacga
aatagcatgtactttaaggacattgttgccttgcagtttgcttttcgtcttattggtgca
ccagaattctccgactttgtgatggcttacaaaggtactttgtatcgctgttatgtggaa
gcgactaagagacatacttcgatgttggagcagtttcatgttagtgaagatcagaagaga
agaaacgagaaggcgttagagtggttgcttatgctggggcaaggagctttcgttttttct
gctgctgtaacagctggtgttacgatcttcaaaattcataaatggataaaaagtcgtatg
ctcttaagggctctgcaaatgctaccgtctgttggtggtggtggtaacgaaggtggtggt
agattttctgaggaggctcttaacagatttgcagcaagtcaaactcctgaggaacgcatt
gaggctctgcatactgatttcgacacggctgctgatgacatggaaagttttttaccagaa
gacatgcaggctgagattagacatgttattcaagctcacgttgatggaacttatcacgca
gcagatcttccttttctgggcgacatgtctgatgccgttgttcctgctatggcagattct
gttgtcgatttgagtaatgttagtagtgatgtgggaagtgtggatacgtctgtttcaagt
gtgactagtaaggttagacgtcgtgccgttgctagcaacacgaggatttacccgagtgtt
ggtaatgttaggtatagtgatattaagtcaccgagggttagtggtaaaagtggaattagt
agtatgaaaatgaaaatcactagtaggcctatgttggcgtcctag
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