Viruses: 956368
Help
Entry
956368 CDS
T40000
Symbol
RT, SrCSVs2gp2
Name
(RefSeq) Sorghum chlorotic spot virus; CP readthrough protein
KO
K27059
Furovirus coat protein readthrough
Virus
107804
Sorghum chlorotic spot virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
TMV_coat
Motif
Other DBs
NCBI-GeneID:
956368
NCBI-ProteinID:
NP_659023
RS:
NC_004015
UniProt:
Q9JGJ3
LinkDB
All DBs
Position
NC_004015:191..2368
Genome browser
AA seq
725 aa
AA seq
DB search
MAVEAGYDTWNAEINRIAVRHAFIRYNTLLATVQDWTKTRTSLVAHVGTVLAALSTLGTR
DFFSRKKRFAFAEADGDIIFCDLSDEGTQQAMNRLKTVLMAVKGEGLKARNAGRASGTGT
QAQETEDTSGNDTALAIANALVEFQTHIDSDLFLKNHCFTQDQFEARYNLKWSGKXWGGV
LSASRESVVENAVLRRLTAKDLGLLPRRDTNGTVLQDGPDILYEELEDALLASNTSVYNP
HAAIEEYEIDTGDGEQLRHEVSHTEDSDYRILYLFLILCAILMTLAMMLSRAFVNFLYNR
RDHRRFGGPCERCARRLWRFRLWLVGLAMRRYGDLQVTRKRHTRSAMRQYLNSYEDQTDL
WQSYEGVTPEEALIVADQHLFVDAVDQLASGGGDLQCVRTAQTISERYGVKNPALQDKLD
EFARRLAIQVRFEDTDATPGFLDLRNASMQEVLDCDLSEQTINPQYNQICALQHMFAMVG
KPAFTDFVIAYKGTYYPCVIEAQRKHAEMLGTDPDDKWGPLEWMYCVIMVGSLASFGFAT
VKGIVKLSQMVKNWLRLRALRALPSVTHGGDGGDGGLPFFEMEDFTARLRVLNEFVANMG
EQVVDTSVEDLRRDLVSVLTAHSGSEPPAVDRPYLEGVGIGREVDELPASTEIEGEQGES
LFDPGLRIKRWETEAAVPKGVGGFSSFIRTSGSVSGRARMSAQNSVSRVKLRNASMMKSK
RLMAA
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgaagccggttatgatacgtggaatgctgaaatcaaccgtatagcagttcgc
catgcgtttataagatataatactctattggcgacggtgcaagactggacaaagacgcgt
acctccctggtggcgcatgttggcacggtattggccgcgctaagtacgttgggaactagg
gactttttctctaggaagaagcgttttgccttcgcggaagctgatggggatatcattttc
tgtgatcttagcgatgaaggtactcaacaggccatgaatcgcctgaagacggtactaatg
gctgtgaagggagaagggttgaaagcgaggaacgctggtcgtgctagtggtaccggcacg
caggcgcaggaaactgaagacacgagcgggaacgataccgctttagctattgctaacgcc
cttgtggagtttcaaactcatatagacagtgatttgtttttaaaaaatcactgctttacg
caggatcagtttgaagctcgttacaatttgaaatggagtggcaaatgatggggtggcgtc
ttgtcggcgagccgcgagtctgtagtggaaaatgctgttctgcggcgattaaccgctaaa
gatttggggttgctgccaaggcgcgatacaaacggtactgtactgcaagatgggcctgac
attttgtatgaggagttggaggatgctttgttagcgtctaacacctctgtgtacaatcca
catgcagccattgaggagtatgagattgacactggagacggtgagcaattacggcatgaa
gtttctcatactgaagattcggattacagaattttgtatttgtttcttatactttgtgcg
atattgatgactttagctatgatgttgtctcgagcttttgtgaacttcttgtataatagg
agagaccacagaaggttcggtgggccatgtgagaggtgtgctagacgtttgtggagattc
agactttggttggtaggtctggccatgcggcgttacggtgatttgcaggttacgcgtaaa
cgccacactaggagtgctatgcgacaatatttaaactcttatgaggatcagactgatttg
tggcagtcttatgaaggcgtcacacctgaagaagcattgattgtagccgatcagcacctg
ttcgtggatgcggttgatcagctagcgtcgggtggtggggatttgcaatgtgtgcgaacg
gcccagactatctccgagcgctatggcgtgaaaaaccccgctttacaggacaagttggac
gagtttgctaggcgattggctattcaggttaggtttgaggatactgacgctactcctggg
tttctggatttgagaaacgcgtctatgcaagaggtattggactgtgatttgtctgagcag
actattaatccccaatacaaccagatttgcgcccttcagcacatgtttgctatggtaggt
aagccggcgtttaccgatttcgttattgcttacaaaggtacttattatccgtgtgttata
gaagcccaaaggaaacacgcggagatgctggggactgatcctgatgacaaatggggtccg
ttggaatggatgtactgtgtcattatggtcggttctttagcgtctttcggatttgccacg
gtgaaaggaattgtaaagttatcacaaatggtcaaaaactggctgcgacttcgtgctctg
cgggcgttaccttcggtcacgcatggaggggacggaggcgacggtggtttaccgtttttt
gagatggaggacttcactgccagattaagagtattgaatgaatttgtcgctaatatggga
gaacaagttgttgacaccagtgtagaagatttacggagagatttggtatcggtgttaact
gcgcactctggatcggaaccacctgctgttgataggccatatcttgaaggtgtgggtatc
ggtagagaggttgatgaacttcctgcatctaccgagattgagggtgagcagggagagtca
ttgtttgatcccggtttgagaatcaagcgatgggagactgaagcggctgttccgaaagga
gtaggcggtttttcttctttcattagaacgtccgggtctgtgagcggaagagccaggatg
tcggctcagaatagtgttagtagagttaagttgaggaatgctagtatgatgaagtctaag
aggctaatggcggcttag
DBGET
integrated database retrieval system
