Viruses: 956489
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Entry
956489 CDS
T40000
Symbol
RBSDVs10gp1
Name
(RefSeq) Rice black streaked dwarf virus; hypothetical protein
Virus
10990
Rice black streaked dwarf virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Fiji_64_capsid
Motif
Other DBs
NCBI-GeneID:
956489
NCBI-ProteinID:
NP_620459
RS:
NC_003733
UniProt:
Q91E10
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Position
NC_003733:22..1698
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AA seq
558 aa
AA seq
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MADIRLDIAPDLIHNGVPQRLSDTIILNNRPTITLLSHFNNLFHELNIVKAPHVASSQTT
VNLYIRKHSLTRLHDRLQTVETSTLPNITQLKDHIRSFFQNEHQPIFQTLTNNDLSEEFV
GVTTLGLSLFATSKLDAEQIERVQIETLTEGNITLKPFSADGLEVILDDSYIGIVGKIPG
LEVHKLLDKCCREVPAQMGILTDEVKLLMRTGKLRIDGGYDFNCPASTTDVTHYGGYDQF
SRQMFERLNLFYNISLCIIPVSALKTVHLFEKELSVLDADKSLLEQTWSAVASFVETWQV
KSKVKADDPDEYELTSLSTLRTNYDGTSASIPFTDKKFIDWYIKTFSKTEKGSSLRRNEL
EEKSAASTSTTVKKVKIHFSVQYFDEFKVNGHEKSVVVQTHKGEMTLDYYRKIGEVLSAI
WKRGKSLAVPCFDYIKLGVEKAFHLAPVILKKYNLTIDDIINFIDKGPSYLAKLDKIDDW
SLISKLIITSVLPNIIQAVYKTDPSNNVMNSVIISRANNLLKSDRDRLLKKALSANVSSS
NTSSHEHTQKIVLNKVTR
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggctgacataagactcgacatagcgcccgatcttatccataatggtgtaccccagaga
ctttccgatacaataattttaaacaaccgaccaacaatcactctgttatctcatttcaac
aatctatttcatgaattaaacattgtcaaagcgccccacgttgcatcttcccaaactacc
gttaatttgtacattcgtaagcattcgttgacccgacttcatgatagactgcaaaccgta
gaaactagcactttacccaacatcacgcaacttaaagaccatatacgtagcttctttcaa
aatgaacaccaacctatttttcagactctaacgaacaacgacctaagtgaagaatttgta
ggtgtgactactcttggactaagcttatttgctacctccaaacttgatgctgaacaaata
gaacgtgtacaaatcgagaccctaactgaaggaaacattactttgaagcccttttccgct
gatggtttagaagtcattctcgatgatagttatattggtatagttggtaaaattccaggt
ttagaagttcataaattgttagataaatgttgtcgtgaagttcctgctcaaatgggaata
cttactgatgaagttaaacttttgatgcgtactggtaaattaagaattgatggtggttac
gattttaattgtcctgcaagcactacggatgttacacattatggtggttatgaccaattt
tcacgtcaaatgttcgaacgtttgaatctattttataatattagcctttgcataatcccc
gtttcggctttgaaaacagttcatttatttgaaaaagaactaagtgttttggatgcagat
aaatctttactcgaacaaacttggagcgcagtagcgtcatttgttgaaacatggcaggtt
aaatctaaagttaaagctgatgatccagatgaatatgaattgaccagtttgtccacgttg
cgcactaattacgatggcacctctgcttctattccttttacagataagaaattcattgat
tggtacattaagactttttctaaaactgagaaaggatcgtcgttgcgtcgaaacgaatta
gaagagaaaagtgccgctagtacttcaactacagtaaagaaggttaaaattcatttctcc
gttcaatattttgatgaatttaaagttaatggacatgaaaaaagcgttgtagttcaaact
cataaaggcgaaatgacgttagattattatcgtaaaattggcgaagtgttgagcgcgatt
tggaaacgcggtaagtctttggctgtaccttgttttgattacattaagcttggcgttgag
aaagcatttcatttagcacccgtaattctaaagaagtataacttgactattgatgatatt
atcaacttcattgataaaggaccttcttatttagctaaattagacaagattgatgattgg
tctttaatttcaaagcttattattaccagtgttttacctaacattattcaagctgtttat
aaaaccgatccaagtaataatgttatgaactcagtaattatcagtagagcgaacaacttg
ttgaaatctgatagggacagactattaaagaaggcactttccgccaacgtttcttcctcc
aatacatctagtcatgagcatacacagaagatagtactaaacaaagtgacaagatga
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