Viruses: 956497
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Entry
956497 CDS
T40000
Symbol
RDVs5gp1
Name
(RefSeq) Rice dwarf virus; viral structural protein
Virus
10991
Rice dwarf virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Other DBs
NCBI-GeneID:
956497
NCBI-ProteinID:
NP_620532
RS:
NC_003762
UniProt:
Q85437
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Position
NC_003762:22..2427
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AA seq
801 aa
AA seq
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MSNPDYCIPNFSQTVNERTIIDIFTICRYRSPLVVFCLSHTELAKKYAQDVSMSSGTHVH
IIDGSVEITTSLYRTFRTIATQLLGRMQIVVFVTVDKSVVSTQVMKSTAWASRGSFVELR
NQSVDSSTLVNKLENLVSFAPLYNVPKCGPDYYGPTVYSELLSLATNARTHWYATIDYSM
FTRSVLTGFIAKYFNEEAVPIDKRIVSIVGYNPPYVWTCLRHGIRPTYIQKSLPNPGGKG
PFGLILPVINELVLKSKVKYVMHNPQIKLLCLDTFMLSTSMNILYIGAYPATHLLSLQLN
GWTILAFDPKITSDWTDAMAKATGAKVIGVNKEFDFKSFSVQANQLNMFQNSKLSVIDDT
WVETDYEKFQAEKQAYFEWLIDRTSIDVRLISMKWNRSKDTSVSHLLALLPQPYGASIRE
MRAFFHKKGASDIKILAAETEKYMDDFTAMSVSDQINTQKFMHCMITTVGDALKMDLDGG
RAVIASYSLSNSSNPKERVLKFLSDANNGKAMVVFGAPNTYRLAYAKKVGLVLDSAIKMS
KDLITFSNPTGRRWRDYGYSQSELYDAGYVEITIDQMVDYSSDVYNGVGYFANSTYNDLF
SWYIPKWYVHKRMLMQDIRLSPAALVKCFTTLIRNICYVPHETYYRFRGILVDKYLRSKN
VDSISLFHYWSGSKTFTVLSHFEVPHECGPLVFEASTDVNVSGHLLSLAIAAHFVASPMI
LWAEQMKYMAVDRMLPPNLDKSLFFDNKVTPSGALQRWHSREEVLLAAEICESYAAMMLN
NKHSPDIIGTLKSAINLVFKI
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacccggactattgcatacctaatttctctcaaacggtgaatgagagaacgata
attgatatatttacgatttgcagataccgttcacctctagtggtattctgccttagccac
actgaactggctaagaaatatgctcaagatgtttccatgagtagtggaactcacgtccat
attattgatggaagtgtggaaataactacttctttatacaggacatttcgtactattgca
acccaactgcttggaaggatgcaaatagttgtatttgtcaccgtggataagtctgtcgta
tccacgcaagtaatgaaaagcactgcctgggcttctcgaggctcatttgtcgaactccgc
aatcagtcggttgattcgtcaactttggtgaataagctcgagaatttggtatcgtttgct
cctttgtacaacgtgcccaaatgtggtccagattattatggccccactgtgtactctgaa
ctattatctttggcaactaatgctcgcactcattggtatgccaccattgattattctatg
ttcaccaggtctgttttgactggtttcatagctaaatatttcaatgaggaagctgtaccc
atagataaaaggatagtgtcaattgttggctacaatccaccttatgtttggacgtgtcta
cgtcacggaattcgtccaacatatattcagaagtcgctcccgaatccgggtgggaaaggt
ccatttggactcatcttacccgtaatcaacgagctagtactgaaaagtaaagtgaagtat
gtgatgcataatcctcaaatcaagcttttgtgcttggatacgtttatgttatccacttca
atgaatattttatacattggcgcctatccagctacccacctactaagcttacagcttaat
ggatggacgattctggcatttgatcctaaaataactagcgattggactgatgctatggcg
aaggctacgggtgctaaggtgattggcgtgaacaaagaatttgactttaagtctttttca
gttcaggctaaccaactaaacatgtttcagaattcgaagttatcagttattgatgacaca
tgggttgaaacggactatgagaagtttcaagccgagaagcaagcttattttgaatggcta
attgataggacgtcaattgacgttcgtttaatttctatgaagtggaataggagtaaagat
acctcggtgtctcatcttctcgcacttctcccacagccttacggtgctagtattcgtgag
atgagggcattcttccacaagaaaggagccagcgatataaaaattctggctgctgagacg
gaaaagtacatggacgattttacggctatgtctgtttcggatcagatcaatacgcaaaag
tttatgcattgcatgatcactacggttggcgatgctttgaaaatggatttggatggtggc
agagctgtcatcgcgtcttattcattatcaaattcttcgaatccgaaagaacgcgtgctt
aaatttttaagtgacgctaacaacggtaaagccatggtggtgtttggagcacctaatacg
tatcggctggcctatgctaaaaaggttggtttggtcttggacagtgcgattaaaatgtct
aaggatctgatcaccttttcgaatccaacgggacgtcgttggagagactatggatatagt
caatcagagttgtatgatgctggatatgttgagataaccattgatcagatggttgattac
tcttcagacgtttacaatggggttggctatttcgctaattcgacttataatgatctattc
tcatggtacattcctaaatggtatgtgcacaagaggatgctgatgcaagacattcgcctt
tcaccagctgcgttagttaaatgtttcaccactctaatacgcaatatatgttacgtacca
cacgaaacatattaccgttttagggggatacttgttgacaagtatctgaggtctaaaaat
gtcgattccatctcattattccattattggagtggatcaaagaccttcacagtgctcagt
cactttgaagtccctcatgaatgtgggccactggtatttgaggcgtcaactgacgtgaac
gtatcagggcatctactttcgttggccatcgctgctcacttcgtcgcatcacccatgatt
ctgtgggctgaacagatgaagtacatggctgtcgatcgtatgttgccgcccaatcttgac
aaatctcttttcttcgacaataaggttacgccttccggtgctcttcagaggtggcactct
cgcgaggaggtcttattggcagcggagatatgcgagtcttatgcggccatgatgttgaac
aacaagcattcacctgacatcatcggtacgcttaagtcagctataaatttggtattcaaa
atctga
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