Viruses: 956619
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Entry
956619 CDS
T40000
Symbol
CPSMVs2gp1
Name
(RefSeq) Cowpea severe mosaic virus; polyprotein
Virus
12261
Cowpea severe mosaic virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Como_LCP
Como_SCP
Motif
Other DBs
NCBI-GeneID:
956619
NCBI-ProteinID:
NP_619517
RS:
NC_003544
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Position
NC_003544:255..3263
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AA seq
1002 aa
AA seq
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MSTFRYKCKQLDQEIQWWFSGTGNRAFWKFEKKLAELHEWYWSLALDPFPYSGFFYKCFY
ELFQLWVKLGLIVQVSYLILLLDFFVYTIPKKMASQIETTVEKVKQSGIPADILRKRAVD
YWKKNNSHNSQMQDVLPNVDEIYEGMRANIAKYLGRSSTVTSIAKLGKCKVYRKKNIPLA
NLPSLQTSCVPITLTEESVGNSDYTTEETNSEVKSLHVGAIEIVMNSFASSDCNILGGFL
LIDTCHTDINNAIRSIFVAPMRGGRPIRMISFPDTLVQIEPNMNKRFQLLCTTSNGDFMQ
GRDLAMMHVNVLAHAVTHTSTYTPTPYYEKILSREKGFIVEYLNRMTYAVHNQNHPTEKD
LLESDFQFDFEGQPVLKRISSTKAIFSKGSSFRYMISGKKEHKIDKPRLEEDGSKSYIDG
LQDTFDTTHATLQSGADLFKRNLDDVSTISDTMLGAMIGQTKVVIPKTLVAGTVLKSGPL
SDVMQQGSFRSTIALQRTHIITGKIHVVAMLETAVNTGLGLAICFNSGIRGKASADIYAT
CSQDAMIWNPSCTKVMQYAFNPNPCSDGWSLAFLERTGYHCVVTCVTGWTGTPLQDTFMT
INWHISREACVPKIYTIFDPEPDMMLNRWMGRAIFPQQSTQVVRRMPLSIGGGAGAKNSI
LMNLPNAILSMWRYFKADLEFELIKMSSPYINATIAFFVAFGDLSDDTVNFEAFPHKLIV
FSDKQDRTTISFSKDEFLMAWSTQVRPDTKLSEDGCPYLYAITHNGVSSSVEGDFILGIK
MVGLKAVENIGVNPGIIGSRLLGAVAQSGQTQQVWNKIWRIGTPPQATDGLFSFSIDLLG
VELVTDGQEGAVSVLSSSPVANLLRTAAWKCGTLHVKVVMTGRVTTTRANWASHTQMSLV
NSDNAQHYEAQKWSVSTPHAWEKEFSIDICGPNRGFEMWRSSWSNQTTWILEFTVAGASQ
SAIFEIFYRLDNSWKSAGNVLMPPLLVGNPRLDIKGRAAAAA
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactttccgttataagtgcaagcagttggatcaagagatacagtggtggttttct
ggaacaggcaaccgagcattttggaaatttgagaaaaaattggctgaattgcacgagtgg
tactggagtttggcactagacccatttccctattctgggttcttttacaagtgcttttac
gaattatttcaactgtgggtcaaactaggactaattgtgcaagtaagctaccttattttg
ctccttgactttttcgtctacaccattccaaagaaaatggctagtcagatagaaactaca
gtcgaaaaggttaaacaaagtggaataccagcagacatactgcgtaaacgcgctgtggat
tattggaagaaaaacaatagccacaactcgcagatgcaagatgtcctacccaatgtggat
gaaatctacgagggtatgcgagcaaatattgcaaaatatcttggtcgcagttccactgtc
acaagtattgccaagctcggaaagtgcaaggtgtatcgaaagaaaaatataccattagcc
aacttgccaagtttgcaaaccagctgtgtgcccatcacactgactgaggaaagtgtagga
aattctgactacacaactgaagaaaccaattcagaagtgaaatcattacacgttggagct
attgaaatcgtgatgaatagctttgcgagtagtgattgtaacattcttggtggtttctta
ctaattgatacatgccatacagatatcaacaatgctattcgtagtatttttgtggcacca
atgagaggaggtcgaccaattaggatgatttcttttcccgacactctggtccagattgag
cctaacatgaataagcgttttcaattgctgtgtacaacaagcaatggagacttcatgcaa
gggcgagatctggcgatgatgcatgtgaatgtgctagctcatgctgtcacgcacacatcc
acctatactcctacaccctactatgagaaaattctctcacgagaaaaaggatttattgtg
gagtatctgaataggatgacttatgcggttcataaccaaaatcatcctactgaaaaagat
ttgcttgaaagtgatttccaatttgactttgaagggcaaccagtgcttaagagaatctca
tctaccaaagctattttctctaaaggttctagttttcgatatatgatttctggcaaaaaa
gagcacaagattgacaagccaaggctagaagaagatggtagtaagagttacattgatggt
ttacaagatacctttgacacgactcatgctactctgcaatctggggctgatctattcaaa
cgaaatttggatgatgtaagcaccatttcggacaccatgcttggggccatgattggacaa
accaaggtggtgattccaaaaacattagttgcaggtacagttctcaaaagtggaccgctt
tcagatgtgatgcagcagggatcattccgatcaacaatagcattgcaaagaacacatata
ataactggaaaaatacatgttgttgcgatgcttgaaactgctgtaaatacaggactggga
ttggccatttgtttcaatagtggcattcgaggaaaagcttctgcagacatctatgccacg
tgttcacaagatgccatgatctggaatccatcatgcaccaaggttatgcaatatgcattt
aaccctaacccgtgttctgatggctggagcttggcttttttggagagaactggttaccat
tgtgtggtcacatgcgtgacaggatggactggaacgccattgcaagacacctttatgacc
ataaactggcatatttctagggaagcatgtgtaccaaaaatatataccatttttgatcca
gaaccagatatgatgttaaatagatggatgggacgtgctatctttcctcagcaaagtacg
caggttgtgaggagaatgccactttccattggtggtggtgcaggtgcaaagaattcaatt
ttgatgaaccttccaaatgcaatactatcaatgtggcgttacttcaaggctgatcttgag
tttgaactcatcaagatgtcctccccatatataaatgcgacaatagcattttttgtggcc
tttggggatctctctgatgatacagttaattttgaagcttttccccacaagttaattgtc
ttttctgacaagcaagacaggacgaccatatctttctctaaggatgaatttttgatggca
tggtccacacaggttaggcccgatactaaactcagtgaggatggttgcccctacctgtat
gccataacgcacaatggtgttagttcttctgtggaaggagattttattcttggtatcaag
atggtcgggctcaaagctgtagaaaacataggagtgaatccaggaatcattggatcgcgc
ttgttaggggcagttgcccaatctggacagacacagcaggtttggaataagatctggcgc
attggaactccaccgcaagccacagatggtttgttctcattttctatagatcttcttgga
gttgaactggttactgatggccaggagggggcagtttctgtattgagcagcagtccagta
gcaaatttgctacgcacagcggcttggaagtgtggaacgctgcatgttaaagttgttatg
actgggagagttactaccactcgagccaattgggcatcacatacccaaatgtcactagtg
aattctgacaatgctcagcattatgaagcacagaaatggagtgtttctacaccacatgcg
tgggaaaaggaattttctatagacatatgtggtcccaacaggggttttgagatgtggcgc
tcatcttggagtaatcaaaccacatggatattagaatttacggttgctggagcttctcag
tccgcaatattcgaaatattctatcggcttgataattcatggaaaagtgctggaaatgtt
ttaatgccaccattgttggttgggaatcccaggcttgacatcaaaggtcgtgccgctgca
gctgcatag
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