Viruses: 956623
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Entry
956623 CDS
T40000
Symbol
SqMVs2gp1
Name
(RefSeq) Squash mosaic virus; polyprotein
Virus
12263
Squash mosaic virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Como_LCP
Como_SCP
Nepo_coat
Motif
Other DBs
NCBI-GeneID:
956623
NCBI-ProteinID:
NP_620658
RS:
NC_003800
UniProt:
Q91PR5
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All DBs
Position
NC_003800:201..3230
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AA seq
1009 aa
AA seq
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MWHFCEQVYECFEGYHKDYSVQTVPVEYLASHYIVNKFRPDPLAVLWLFCLGIWWEIIQI
LHYLFQYKEPALFISSCQNLAAFLERKYSMEVIQKEGLAASALKDKERLAEKAVVNQPLS
NLIPNSNKMYERSKSLLSGLKRGLIKQKEIAFDKLMGGSTIDFQHIPTGTLTPGENKVLD
IPIVPQHLLTSTNITDYHQANKKNANGATALHVGAIEVIMDCFTSPDSNICGGMLLVDTA
HLNPDNAIRSVFVAPFIGGRPIRVLLFPDTLVEIAPNMNSRFKLLCTTSNGDVAPDFNLA
MVKVNVAGCAVSLTKTYTPTAYLEQELIKEKGAIVQYLNRHTFSMHRNNQMTKEEMQKQR
LSFRLESALTLQEKHPLHATFCKSTNFVYKIGGDAKEGSNGNLTVNESQLSSHSPSAHVL
HKHNNSGDNEVEFSEIGVVVPGAGRTKAYGQNELDLAQLSLDDTSSLRGSALQTKLATSR
VILSKTMVGNTVLREDLLATFLQDSNERAAIDLIRTHVIRGKIRCVASINVPENTGCALA
ICFNSGITGAADTDIYTTSSQDAIVWNPACEKAVELSFNPNPCGDAWNFVFLQQTKAHFA
IQCVTGWTTTPLTDLALVLTWHIDRSLCVPKILTISSAHASFPINRWMGKLSFPQGPARV
LKRMPLAIGGGAGTKDAILMNMPNAVISLHRYFRGDFVFEITKMSSPYIKATIAFFIAFG
DITEEMTNLESFPHKLVQFAEIQGRTTITFTQSEFLTAWSTQVLSTVNPQKDGCPHLYAL
LHDSATSTIEGNFVIGVKLLDIRNYRAYGHNPGFEGARLLGISGQSTMVQQLGTYNPIWM
VRTPLESTAQQNFASFTADLMESTISGDSTGNWNITVYPSPIANLLKVAAWKKGTIRFQL
ICRGAAVKQSDWAASARIDLINNLSNKALPARSWYITKPRGGDIEFDLEIAGPNNGFEMA
NSSWAFQTTWYLEIAIDNPKQFTPFELNACLMEDFEVAGNTLNPPILLS
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgtggcatttctgtgaacaagtttatgagtgttttgagggttaccataaagactactct
gttcaaacagtccctgtggaatatttggcctcacattacattgtcaacaagtttagaccc
gaccctttagctgttttgtggcttttctgtttgggaatttggtgggagattattcaaata
ctccactatctatttcagtataaagaaccagcactttttattagcagctgtcagaacctt
gctgcttttttagagagaaagtattccatggaagtgattcaaaaggaaggtttggctgct
tcggcactcaaagacaaggagcgattggccgaaaaagctgtggtcaatcaacccctgagt
aatttaattcccaactcaaataaaatgtatgagcgaagtaagagtctcctatctggtctt
aagcgtggtttgataaagcaaaaagagatagcttttgacaagcttatgggaggctcaaca
atagatttccaacatattccaacaggaactctcacacctggtgagaacaaagtgctagac
ataccaattgttccgcaacatttattgaccagtacaaatataacagattaccatcaagct
aacaagaaaaatgctaatggtgctactgcacttcatgttggggctatagaggtcattatg
gattgcttcacctctcctgatagcaatatttgtggtggtatgttgctggttgatacagca
catttaaatccagataatgctataagaagtgtgtttgttgcaccatttataggtggtcgt
cctattcgagttttgttatttccagataccttggtggaaattgccccgaacatgaattct
cgattcaaattgctatgtactacgagcaatggcgatgttgcaccagatttcaatttagcg
atggttaaagtcaatgttgcaggttgcgctgttagtttgactaagacatatactcctaca
gcttacctcgagcaagaattgatcaaagaaaagggggccattgtccaatacttaaacagg
cacaccttctctatgcatcggaacaaccagatgacaaaggaagagatgcaaaagcagcgc
ctctcttttagattggaaagtgctctcactttgcaggaaaagcatcctttgcatgccact
ttttgcaagtcaactaattttgtttacaagattggtggagatgcaaaagaaggcagcaat
ggcaatttgactgtcaatgagagccagttgtcctcacattctccttctgcacatgtcttg
cacaagcacaataacagtggtgataatgaagtagagttttcggaaattggtgtagttgtg
ccaggtgctggcagaactaaggcttatggccaaaatgagctagatcttgcgcaactttct
ttggatgatactagttcccttcgtggatctgcgttgcaaactaaattggccacttcccgt
gtcattctgagcaagacaatggttggaaatactgtgctcagggaggatttgctcgccacc
tttttgcaagatagcaatgagagggccgctatagatttgattcgcacccatgtcatcaga
ggcaaaatacgctgtgttgcttctataaatgttccagagaatacaggttgtgcattagct
atctgtttcaacagtggcataacaggagcagcagacacagatatttataccacaagttct
caggatgccattgtgtggaatcctgcttgtgagaaagctgttgagttgtcattcaacccc
aatccttgtggtgatgcttggaattttgtctttctgcaacaaacgaaggcacattttgcc
attcagtgcgtgaccgggtggactacaacaccgcttacagatttagcgctggtgcttaca
tggcacattgatagaagcttgtgtgtgcctaaaattctgacgattagttctgcacatgct
tcttttccaattaatcgctggatgggaaagttatcttttccgcaagggcctgcgcgtgtt
cttaagaggatgcctttggctattggtggaggggctggtaccaaagacgctattctgatg
aatatgccaaacgctgttatctcacttcaccgatattttaggggagatttcgtctttgag
ataacaaagatgagttctccttatataaaggcaaccattgctttctttatagcgtttggt
gatattacagaggaaatgactaatctggagagtttcccccacaagctcgtgcagtttgct
gaaattcaggggcgtaccactataacgttcacgcaaagcgaatttttgacggcatggtct
acacaggtattaagtactgtcaatcctcagaaggatgggtgtccccacttgtacgcactt
ttgcatgactctgctacttcaactattgaaggaaattttgtcattggtgttaaattgctg
gacatcagaaactatcgtgcttacggtcacaaccccggttttgagggggctcgtttgcta
ggaatttctgggcagagtaccatggtacagcagcttggaacttataatccaatttggatg
gttcgcacgcccttagaaagtacagcccaacaaaattttgcgagtttcactgctgatttg
atggaatccacgataagtggggactctactggaaactggaatatcacagtttatcctagt
cctatagctaatttgctgaaagtggctgcttggaagaaaggaactataagatttcaactt
atttgtcggggtgccgctgtcaagcagtctgactgggctgcgtcagctagaatagacttg
attaacaacctctcgaacaaggctctacccgcgcgttcctggtacattacaaagccacga
ggaggcgacatcgagtttgacttagagatagcgggaccaaataatggttttgaaatggcg
aattccagttgggctttccagaccacatggtacttggaaattgccatagataatcccaag
caatttactccttttgaattaaatgcctgtcttatggaagattttgaagtggctggaaat
actttaaatccacctattttgctttcctag
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