Viruses: 956631
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Entry
956631 CDS
T40000
Symbol
RCNMVs1gp1
Name
(RefSeq) Red clover necrotic mosaic virus; 88 kDa protein
KO
K26525
Dianthovirus RNA-directed RNA polymerase [EC:
2.7.7.48
]
Virus
12267
Red clover necrotic mosaic virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
RdRP_3
RdRP_4
RdRP_2
DUF6120
Motif
Other DBs
NCBI-GeneID:
956631
NCBI-ProteinID:
NP_620523
RS:
NC_003756
UniProt:
P22956
LinkDB
All DBs
Position
NC_003756:join(124..831,831..2426)
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AA seq
767 aa
AA seq
DB search
MGFINLSLFDVDKLMVWVSKFNPGKILSAICNLGIDCWNRFRKWFFGLNFDAHMWAVDAF
IPLMPHYTEQMERVVDDFCSETPESKLEDCLELDTSVNEFFDEEVYKKDEEGVMKLQRSA
ARKHIKRVRPGMMQAAIKAVETRIRNRHTIFGDDMGKVDEAAVRATASDICGEFKINEHH
TNALVYAAAYLAMTPDQRSIDSVKLAYNPKSQARRTLVSAIRENKAVAGFKSLEDFLGGP
LSFPVEDAPYPILGIPEIRVAEKRASRVMKSKRVVGLPAVSAGLKVCVHQTSLHNMIVSL
ERRVFRVKNSAGELVVPPKPIQNAFDSISYFREEWLRKLSHKGQILKSSLADVVACYSSE
KRKLYQKAADSLEKKPVQWRDSKVQAFIKVEKLECDTKDPVPRTIQPRSKRYNLAIGQYL
RLNEKKMLDSIDDVFKEKTVLSGLDNRAQGRAIAHKWRKYQNPIGIGLDASRFDQHCSVD
ALKFEQTFYKACFPGDQQLETLLKWQLSNTGSALLPTGELVRYRTKGCRMSGDINTGLGN
KILMCSMVHAFLKETGVRASLANNGDDCVLFCEKGDYEQINRNLEQWFLCRGFEMTVEKP
VDVLEKVAFCRSQPVCIATQWAMVRQLGSLSRDCFSTQDWLNPKTFKDAMNALGQCNGII
NDGVPIHMAQAKLMHRIGGNRKFNLDALHKQMEYSWRDRLGKRTNLLWSEVEDATRLSYF
RAFGIEPYIQRIVEEYFSQVEITCEGRSTNVLPTHYSRIHKDLIKAR
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgggttttataaatctttcgctttttgatgtggataaattaatggtgtgggtgagtaaa
ttcaatccaggcaaaatcctgtctgcaatctgcaacttgggtatagactgttggaatcgc
tttcgcaagtggttctttggtctcaactttgatgcacatatgtgggcggtggatgccttc
attccactcatgccacattacacggagcagatggaacgtgtagtcgacgacttctgcagc
gaaaccccagaatccaaattagaagactgtctggaactggacacctcagtaaatgaattc
ttcgatgaagaggtgtacaagaaggatgaggaaggcgtgatgaaactccaaaggagcgct
gccaggaaacacattaaacgtgtgcgcccaggcatgatgcaagcggccattaaggctgta
gaaacgaggatcagaaatcgccataccatctttggagatgacatgggaaaggtagacgaa
gctgcagttagagcaactgccagtgacatatgtggtgagttcaagatcaacgaacaccac
accaatgcattggtgtatgccgcagcataccttgccatgacaccagaccagaggtctatc
gacagcgtcaagctcgcctacaatcctaagagtcaagccagaaggactttggtttcagcc
attcgtgagaacaaggctgttgccgggttcaaatcccttgaggattttttaggcggccca
ctcagctttccggttgaagatgccccatatcctattttaggcatcccggaaatcagggta
gctgagaagcgggccagtagagtcatgaaaagtaagagagtcgtagggttacctgctgtt
agtgcaggtttgaaggtttgcgtccatcaaacctccctacataatatgatagttagtctc
gaacgcagggtttttcgtgtgaagaactctgcaggagagttagtagtacctcccaaacct
atccaaaatgcatttgactccatttcctatttccgtgaagaatggttgaggaaattgtct
cacaagggtcaaattctcaagtcctctttggcggatgttgtggcgtgttactcttctgaa
aagaggaagttataccaaaaagcagcagactccttagagaagaaacctgtgcaatggaga
gactccaaggtacaagcattcatcaaagttgaaaagcttgagtgtgacaccaaggatccc
gtacctcgtacgattcaacctcgatccaagaggtacaacctagcaataggccagtatctc
agattaaatgaaaagaagatgttggattccatagacgacgttttcaaagagaagactgtc
ttatcaggtttggacaacagggctcaagggagagccatcgcccacaagtggcgtaaatac
cagaacccaatagggatcgggctggatgcatcgagattcgatcaacattgcagcgtcgat
gccctcaaattcgagcaaactttctataaagcgtgctttcctggggatcaacagttggaa
acattattgaaatggcaattatccaatactggatcggctttgttaccaactggagaactg
gttagatatcgtaccaaagggtgtcgcatgagcggcgatataaacacaggccttgggaac
aaaattctcatgtgcagcatggtacacgcattcttgaaagagacgggagtgcgagcttcg
ttggccaacaatggtgacgattgtgtcctcttctgtgagaagggagattatgagcagata
aaccgcaatcttgagcaatggttcctgtgcaggggtttcgaaatgaccgtcgaaaaacct
gtcgatgtactcgagaaggtggcgttttgtcgtagtcaaccggtttgcattgccacgcaa
tgggctatggtaaggcaattgggaagtttgtcgagagactgcttttcaacacaggattgg
ttaaacccaaagacattcaaagatgcaatgaatgcgctaggtcaatgtaacgggatcatc
aatgatggagttccaatacatatggcacaagcaaaactaatgcatagaatcggtggaaac
cgtaagttcaatctagatgcgcttcataaacaaatggagtacagctggagagatcgtctc
ggtaagagaacgaatcttttgtggagtgaggtagaggatgctacaagattgtcgtacttt
agagcattcggaatagaaccttacattcaaagaatagtggaggagtacttctcacaggtg
gaaatcacttgtgaggggcgatcaacaaacgtattacctacacactactctagaatccac
aaagatctaatcaaagcccgataa
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