Viruses: 956640
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Entry
956640 CDS
T40000
Symbol
GCMVs2gp1
Name
(RefSeq) Grapevine chrome mosaic virus; polyprotein
Virus
12273
Grapevine chrome mosaic virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Nepo_coat
Nepo_coat_C
Nepo_coat_N
Microp_apicomplexa_7
Motif
Other DBs
NCBI-GeneID:
956640
NCBI-ProteinID:
NP_619704
RS:
NC_003621
UniProt:
P13026
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Position
NC_003621:218..4192
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AA seq
1324 aa
AA seq
DB search
MGFSEFFASALGTVARAKATLQGGFARFLSETVVTLQAASPEMRKFAYSKLWEEVDSVKE
LKPLTAQELVATLRKELWCAQVRAQKCTLASTSRFCTCGGIPGEATPTVIKETVHVDECP
NGRNLCRHGTRCLRHGGPGSFQQEREVQVDAPKCPHCAGTGIVPASASWREIRRCWREQR
KVHSLPSLPLHPDVLFEGTNAWQTRLRWLKTWRHVLGDVKPCTPEKWMQAAQIMRTCAVP
SFENPIPGQFGYERLYNGEGKEEYWLQIPATDKYTDLIINWWHAKNTPGWEEPSSSLMDF
KRNRMGPCLHIVEKRVRNSYVAPPWKPWGEDIDILSVMDSLSSQLEDFLDVFYDCAAQFD
GELEFSLSNDRLSSVTGELGGVPISIGAPSKISNTPPKVNFAELYGNLVRHNHRKISALR
PILMAHPDQDEIEDQLDHLENKQGGEIVSTPSFIKMLKEKRKEVRGKEFEEGSEGRLVRS
KDLELSKKDIFLAHTLMDKFHGMSIVKKFGKSDPKLTKVCVDLTNQEEVIKYPVKELQTT
SEGVLSAQTFTVLNRPQFKELNRLAEVGWKEAKSVCLNLHIRSYLPVHLPVYAFCVIMWG
HSSNAEQASLSGAYVYLGDQEASVLQLPLLCGYIGNALEDMEAYKRSLVLSTCFFGTSGL
SPGQNMFGITAVEFTEYLPTSYGGITHERDSWNQMLRNHQGVDKQRFISGFNVVDFVEAG
KEKQLHFPDFDLQPVPKHQPIVRTFGKEKQPLLNKSRSMRVKTFTSFRAGNIPIGRQIDN
TAEAINFELGRASTSNAINPRLDTSETNLRAGGEFAFIHTIDLPTAVTEGQVLAKIDIFK
KIQDAKSMVCVQWMQAGYVNKNLTFISHLAPSQFCGVAIWYIFDAYGKIPSDVTTSLELE
IARSLCPHVHVLRDSKTSVWTIDFHKICGQSLNFSGRGFSKPTLWVIAASTAQLPWSAQV
TYRLEALAQGDEIAHGLATRSIVTYPISLEHLKDIEIMLPPRQMAIGNAGSINFPLSFAV
QQKSSSGRIAYSYAAGLLSHFLGIGGTIHFKIQCTSSAFVTARLRVALWGDTITLEQLSQ
MPHVDCDVDVVSSLKIQSPFYATANFGDSGARFWVTPMSSPMAPETMESKLEYYIQILGI
DADPPMCRQINYDQRFAWFTLLRPPDPKLSKILKLTLPSRVCNIAYKEATVTNYVNAFAI
MCATTGMHAGKCILHFSWTLNKGTSFKDLQGHISFYSGMGDSTIGEHHGEFHLGGPLSSS
LAVPFEFGSFAGPVTSGGTPFTSENWLRVETAHWDWLTSLTVDIQVLPGFRFYGRSAGPL
TIPS
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atgggtttttcggaattttttgcttccgcccttggcactgttgccagggctaaggcaacc
cttcaaggggggtttgcccggtttctttctgaaaccgttgttaccttgcaggctgcctca
cctgaaatgaggaaatttgcctactccaagttgtgggaggaggttgactccgtcaaggag
ttaaaacctctcacagcccaggagctggtagccacactccgaaaggagttgtggtgtgca
caggtgcgtgcccaaaaatgcaccctggcatccaccagccggttctgtacttgtggtgga
atcccaggggaggctaccccaacggtcatcaaagagaccgttcatgtggacgaatgtcca
aatgggcggaatctatgtcgccatggcactagatgcctgcgacatggaggaccgggctct
ttccaacaggaaagagaggtgcaagtggatgcacctaaatgtccccattgtgcagggact
ggtattgtaccagcatctgcatcatggcgtgaaatccgccgttgttggagggaacaacgt
aaagtgcattcccttccatctcttcccctccatcctgatgttctatttgaggggaccaat
gcatggcaaacgcgccttcgatggctgaagacgtggcgccatgtacttggtgatgttaag
ccctgtactcccgagaaatggatgcaggctgcgcagataatgcgcacatgtgctgtcccg
tcctttgaaaatcctataccgggacagtttggatatgagcgcctctataatggagagggg
aaggaggagtactggctccaaattcctgccaccgataaatatactgatttaattataaat
tggtggcatgcaaaaaatacaccaggatgggaggaaccgagttcttctcttatggatttc
aagcggaatcgcatgggtccttgccttcatatagttgaaaagagggtgaggaattcctat
gtggctccaccttggaagccatggggggaggatattgatattctctctgtgatggatagt
ctaagttcccaactagaggattttctagatgtcttctatgattgtgctgcacaatttgat
ggagagctagaattttctctatccaatgatagactatccagtgtcactggtgaactcggc
ggtgtgccaatttcaattggagccccgagtaaaatttccaatactccgcccaaagtgaat
tttgcggagttatatgggaacctggtcaggcacaaccatcgcaaaatcagtgctttaagg
cctattcttatggcccatcctgaccaggatgaaatcgaggaccaacttgatcaccttgag
aataaacaaggtggggagattgtttccactccttcttttatcaaaatgttaaaagaaaag
cgcaaagaagtgcgcgggaaggagttcgaggaaggttcagagggtcgtcttgtgcgttcc
aaggatttggaactgagcaagaaagatatctttctggcacatactctgatggataaattc
catgggatgagtattgtcaagaaatttggcaagagcgatcctaagctcaccaaggtctgt
gttgatttgacaaatcaagaggaagtgattaagtatcctgtaaaggaacttcaaactacc
tctgaaggtgttctatctgcacagaccttcactgtgttaaatcgcccacaatttaaagag
ttgaatagactcgctgaagtgggatggaaagaggcaaaatctgtttgtctcaatctacac
attcggagttatctcccagtgcatctacctgtgtacgctttctgcgttatcatgtggggg
cattcttcgaatgctgaacaggccagtttaagtggtgcctatgtatatcttggggaccag
gaggcttctgttttacagttgccccttctctgtggttacattggaaatgccctagaggat
atggaggcatacaagcgttcacttgttttgtctacatgcttctttggcacatcaggcttg
agccctggccagaatatgttcggaatcactgctgtagaatttacagaatatctcccaact
tcttatggggggataacacatgagcgggattcttggaaccaaatgctgcgaaatcaccaa
ggagtcgataaacagagatttatctctggatttaatgttgttgatttcgtagaggctgga
aaagaaaaacagttgcatttccctgattttgatctgcaacctgtacccaagcaccagcct
atagtgcgaacttttgggaaagagaaacaacctcttctaaataaaagtcgcagtatgcgt
gtcaaaacttttacttccttccgtgctggaaatattcctatcggaaggcaaattgacaat
actgcggaggctataaactttgagctaggtagagcctcaactagcaatgcaatcaacccg
cgtcttgatacttcagagacaaacttacgagcgggtggtgaatttgcattcatccatacc
attgaccttcctactgctgtcacagaggggcaagtcttggcaaaaatagatatttttaaa
aaaatacaagatgccaagtcaatggtgtgtgttcaatggatgcaggctgggtatgtcaat
aaaaacttgacattcatatcacatttggctcccagccaattctgtggggtggcgatctgg
tacatttttgatgcatatggaaagataccatcagacgtgaccacctcgttagagcttgaa
atcgcaaggagcttgtgtccacatgttcatgtgttgcgagattccaaaaccagtgtttgg
actattgattttcacaagatttgtggtcaaagtcttaatttttctgggcgaggattctca
aaaccaacattgtgggttattgctgcctcaactgctcagctgccatggtctgcacaggta
acttatcgcctggaagccttggcacaaggagacgaaattgcacatggtctagccactagg
agtattgtgacataccctattagtctagaacatttgaaagacattgagataatgcttccc
cctcgccaaatggcaattgggaatgctggctcaataaattttccactgtctttcgcggtg
cagcagaaatccagcagtggccgaattgcatactcttatgctgctggtcttttgtcacat
ttcctggggatagggggtacaatacattttaaaatacaatgtacctccagtgcctttgtt
acggcacgtctccgggttgcgttatggggggataccataacattagaacagttgtcccag
atgccacacgttgactgtgatgttgacgttgtatcatctctaaagatacaatcccctttt
tatgcaactgcaaattttggggatagtggggcacgattttgggtaacccctatgagctct
cccatggcacctgagaccatggaatccaaattggagtattatatccaaattttgggtatc
gatgctgatccgcctatgtgtcgccagatcaactatgaccagcgctttgcttggttcacc
ttgttgcgacccccggatccgaagctgagcaaaatcctcaagctcactttgccatctcgc
gtatgcaatatagcatataaagaggcaacggtcacgaactatgtgaatgcgtttgccatc
atgtgtgccactactggcatgcatgctgggaaatgcattctacatttttcctggacgttg
aacaaaggtacatcctttaaggatttgcagggacacatctcattttatagtgggatgggt
gattcaacgattggagaacatcatggtgaatttcatcttggtggacccttatcaagttcc
cttgcagtaccatttgaatttggttcttttgcaggtccagtaacttctggtggtactccc
ttcacttctgaaaattggttaagggtagaaactgcgcactgggattggttaacctctcta
acggtagatatccaagttctaccaggtttccgattctatggacgaagtgctggtcctctg
acaataccttcttag
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integrated database retrieval system
