Viruses: 956641
Help
Entry
956641 CDS
T40000
Symbol
GCMVs1gp1
Name
(RefSeq) Grapevine chrome mosaic virus; polyprotein
Virus
12273
Grapevine chrome mosaic virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
RdRP_1
RNA_helicase
RdRP_4
Peptidase_C3
Motif
Other DBs
NCBI-GeneID:
956641
NCBI-ProteinID:
NP_619705
RS:
NC_003622
UniProt:
P13025
LinkDB
All DBs
Position
NC_003622:216..6974
Genome browser
AA seq
2252 aa
AA seq
DB search
MMDSTIILPYAKYNYSLNKYLFYNSNLDIDLDSFNFYKKYNNTLSLLKRKFLDLFCIPVS
SSSPPAIQKNGLLSASNPKHLFAFANFVLDCGVNPFLQIWEETLANWPLFQGQSLLACCR
TTAEVRREAAEASAEILRLKQVEREHAFQAEVKSLIAAGALPACAEGLARKIWSAGKDQR
KVRVAIRTKLTKANALGAAHRSAVATAQAKAEVLREFEPSPAHIQIAVKAHIFAEKLSRK
YADLTAQVRARRAAARDLRAKEIYLEIVDLLGAPLLSIPQQIKIKGKYLRRSVAAEVEVP
HTRNPMAELVPYKGLGAVSADPRCWVVAQCGKFSATHANLCSEIYSMVIGPWVQLTDFSS
IRQFVMNISFLKDFYPEDALIASLKEVNTEAQLAVAAIVTQEEVSKMEANARSANCRANI
FKRIASRITSAACSVKNAFLDGCELTGKRLSEGVFSVVIGHFREALTTIKFELGVAMELV
EVLIARVKSWFDTLLAKIDHALASLGKWACYALGILLGIGLCNLIETIIGGHGMLVSLFC
TGVFATMAIKCAGGWDAAQREMVAMITTLAQSIFGRRKGLDSTDLNTRSIPLLTNVITAM
TTFGTGLCKFQSSSIIEIGKLAGACHQMRMGKEALKEFAAMIMHYLGRIADKITGRETIF
FDELSTLVSVDVRGWIRCAQGAILESYHTDPGCETFQDVIGRLVQEGQKLQVGVNGIPRK
ISADYASLIGQIMKDLLELQKRMMRCGTVTGRRKEPVWIYLWGPSHCGKSNFMDVLGMAL
CKHFDLPYTVCGRNVKDSFFSGYMGQTIMEIDDLSSIKTDPPMEGELINLVSCKDYPLNM
ADVADKPIYFKSQFVISSSNQEDVPAGAGVRDISSYRSRKAALIEVRRKPGVIFDPDNAM
AASQARFKDPMTHMLLNGQNDENSWMEMDDVITECINISARHRAAQEKLQNASLRAKASL
DPVTLASQEFLRKEVNSVYLEIPTLEIEKAGISGVRGGRCLYADGILYTLGTEFQLIPHP
VENEGYQKLWAQRMKNMYLPAVTTGRYLNASSMIVTGFLRSLVNGDCAVLSVDALSTTAT
FTQKRIFESLNLAERVYLRALQCQIDAYTLDIPENPYSNVCWVKMLKALGQGREFIVSNG
GGILMIAAAIILVLVCGWGFWKAFVGLFTGSMSLGAALAGCQEAEVKAHSVYSADGGDRG
YRSRNIPINHRYSYARSQAGNGLLPASRLCVAIYGPRGVFISGMQYKNKCVMMTRHQAQS
LNEGDELSVVFASTGESMMIRFHAYHIRENVGSEVVCWLAPSLPQLPCDLKGLFLEDAEV
ELPSNFKSMGYVLRQDSNAFHYDTLDTYAAVDKTPLVLKGVNGDDLYIHEIPEKIVFHYE
SRNNDCGMLLTCQLSGKMKVVGMLVAGKDKTSWACILPNPHLAELKSQIEYIPEFGEAEE
GYFKVGHVSPKEAPTMPKKTNSVQVPQALRVPCDLPIKEPSIISKNDPRCPANVDPPKAA
MKKKFQQPMLDLDQKCLDEIAGDMLETWYDCEDSILSDIPLATAINGIPAGCEDAELENF
VMKTSPGYPYFKNKGLGKGKHPYFEECEDGSLKLKEGSQAAELYENMAQFAKEEVPELVV
IECPKDELLPARKIKVGPCRLFEIMPLHYNLLLRVKTCAFTAFLQHNRHRLPCQVGTNPY
SREWGHLLNRLRRVKTNEAINCDYSGFDGLLTPQLVEMMAKMINRLYLRSGESEVMQAQR
LNMIMALCGRYALVGTQVYKVNCGLPSGFALTVVMNSIFNEILIRYAYKTLAPTPEKNSF
GINVCLLVYGDDNLISVSPAVASWFTGEAIRVTLAEKRIKITDGSDKDAPTIEAKPFSEL
DFLKRKFYVHPEHGQVWAPLDKSAIFSCLHWLTPQKSKFALQEKACDYLGEVDVVEELII
NVNVSLVELYLHNDKEEFNRVRSFYIARLPMQVDQFRTWAFCEAFHSAQQTGMLRHDPAK
ILDSLAGPEFPRFMRCSGEGDKAHFYTPILGVCGPHYKPKEQDFLVSTLPIKQGEGVHIP
IKIGGGVGGLPTHQWVKNFGRPSQLKNNDGYACYKLLCEQIEQGKRLVFMSAAPYVAGNA
ALISFGSSRKILKEQMPLCHYRNSIPESVDGLTGYFDAPLPAATIGKSYFANGETYAALC
EFKNGEVLDIVGPTNVQILNGAVRQGKVPCLAAHSVGTKFKVSLVCNKTMCPHHHHTGPT
FEQAFRTCWLSKCKTKETQVSPWFGTKFLGIS
NT seq
6759 nt
NT seq
+upstream
nt +downstream
nt
atgatggatagcaccatcatattaccctatgccaaatataattatagtttaaataaatat
ttattttataattctaatttagacatagatttagatagttttaatttttacaaaaaatac
aataataccctttctctcttaaagagaaagtttttagatttattttgtattcctgtttcc
tcctcttccccccctgccattcaaaagaatggccttctttcagcttccaatccgaagcat
ttgttcgcttttgcgaactttgtcttggattgtggagttaatccattcctccaaatttgg
gaggagacattggccaactggccattgttccaaggccaatcacttttggcctgctgccgc
accactgctgaggtgcgaagagaggctgctgaggcctctgctgaaatcctgcgtctgaag
caggtggagcgcgaacacgcgttccaagctgaggtgaaatccctcattgctgctggagca
ttgcccgcttgtgctgagggccttgctcgaaaaatctggtccgctgggaaggatcagaga
aaggtgcgagttgctatccgcaccaaactcaccaaggccaatgccttgggcgctgcccac
cgttctgcggtggctactgcccaggcaaaggccgaggttttgagggagtttgagccctca
cccgcccatatccaaatcgccgtgaaggcgcacatatttgcggagaagctctcccgcaaa
tatgctgatctgaccgctcaggtgcgagcgaggcgggcagctgcccgagatctccgtgca
aaggagatctaccttgagatcgtggatctcttgggtgcacccctgctgtctatcccccag
cagattaaaatcaaggggaaatatttgcgacgttccgtcgcagccgaggtggaggtcccc
cacactcggaatcccatggcagaattggtgccatacaagggactcggggcggtctctgct
gatccccgttgctgggttgtggcccaatgtggtaaattctctgccacacatgccaatctc
tgctcagagatatattctatggtcattggaccatgggtgcaactcacggatttttcatcc
atccgtcaatttgtgatgaacatctccttcctcaaggatttctaccctgaggatgcttta
attgcttcacttaaggaggtgaatactgaggcccaacttgctgttgctgctatagtgaca
caagaggaggtctcaaaaatggaggcaaatgcgcgttctgcgaactgtagagctaatatc
tttaagcgtattgcttccaggattacatccgcagcctgctctgtaaagaatgcttttctt
gatggctgcgagttgactggaaaacgcctgtctgagggtgttttcagtgttgtgataggg
cactttcgcgaagctctaaccactatcaagtttgaacttggagtggcaatggagcttgtt
gaagtgcttattgcacgtgttaagagttggtttgataccctacttgccaaaattgaccat
gccttggcctctctgggcaaatgggcatgttatgctttgggtatcttactggggattgga
ttgtgtaatctcattgaaaccattattggtggacatgggatgttagtatccctcttttgc
actggtgtttttgccactatggcaatcaagtgtgccggagggtgggatgctgcccaacgt
gagatggttgccatgataaccactctcgcacaatccatctttggccgtcgcaagggattg
gactcaacagatcttaacactaggtctatccctctgctaaccaatgtcatcactgcaatg
actacatttgggactggactttgcaagtttcaaagttcttcgattattgaaattggaaag
cttgcaggtgcatgtcaccagatgagaatgggcaaagaagccctaaaagagtttgcggca
atgataatgcactatcttggccgcattgctgacaagatcactggacgagagacaattttt
tttgatgagctttcaactcttgtctcagtggatgtgcgtggttggatacgttgtgcacag
ggagcaatccttgagtcctaccacactgaccctggatgtgaaactttccaggacgttatt
ggacgcttggtccaagagggtcagaaattgcaagtgggtgtcaatggaatcccacgaaag
atatctgccgactatgcatcactaatcggtcagataatgaaggatctgctggagctccaa
aaacgtatgatgcgctgcggtactgttactgggcgtcgcaaggagccagtctggatctac
ttgtgggggccctcccattgtggaaagtccaatttcatggacgtgcttgggatggcgctc
tgcaaacattttgatttgccctacactgtctgtggccgtaatgttaaagattcattcttt
tctggctatatggggcaaacaatcatggagatagatgatcttagctcaatcaaaactgat
ccaccaatggagggtgagctaatcaatctagtctcctgcaaggattatccccttaatatg
gcagatgtggctgataaacccatctattttaaaagtcaatttgtcatatcatcttccaat
caggaggatgtgcccgctggggctggggttcgtgatatttcctcctatcgcagtagaaag
gctgcactcattgaagtgaggaggaaaccaggagtcatttttgatccagataatgcaatg
gcagcctctcaggctcgattcaaggatcctatgactcacatgctgcttaatgggcaaaat
gatgagaattcctggatggaaatggatgatgttattactgaatgcatcaacatctctgcc
cgacatcgtgcagcacaggaaaagttacagaatgcttccttgcgagcaaaggctagcctt
gatcctgttacactagcctcacaagaattcctgcgcaaggaagtaaattctgtttatctt
gagattcccactcttgagattgagaaggctggcatatctggtgtcagaggtgggcggtgt
ctctatgctgatggtatcctatataccctgggcaccgagtttcagttgattccccatcct
gtggaaaatgaggggtatcaaaagctgtgggcacagcgaatgaagaacatgtatctgcca
gctgttacgactggtagatatcttaatgcctcttccatgatagtaactggctttctacgt
tcacttgtgaatggggattgtgcagttctttctgtggatgctctttccaccactgcgact
tttacacaaaagcgcatatttgaaagtttaaaccttgccgaaagggtttatttgcgcgcg
ttgcagtgtcagattgacgcctacacactggacatccctgaaaatccatactcgaatgtg
tgttgggtcaagatgttgaaagctcttggtcaaggacgtgagtttattgtctccaatggt
ggtggtattcttatgattgctgctgccataatacttgtccttgtctgtgggtggggtttt
tggaaggcatttgtcggtttgttcaccggttctatgtctctcggagctgcacttgcaggc
tgccaggaagctgaagttaaggcgcactctgtctattctgcagacggaggagatcgtggc
taccgatcgcggaacatacctataaatcataggtatagctatgcccgaagccaggctggt
aatggattgttgccagcctcgcgcctttgcgttgctatttacggtccccgcggtgttttc
atctcaggtatgcaatataaaaataaatgcgtgatgatgacccgccaccaagcccagagt
cttaacgaaggggatgagttgagtgtagtgttcgccagcactggagaatcaatgatgata
cggttccacgcctaccatattcgtgagaatgttggcagcgaggtggtttgctggttagca
ccgagtttgcctcagcttccctgtgatcttaaagggcttttcttggaagacgctgaagtg
gagcttccaagcaatttcaaatccatgggctatgtgttaagacaagactcaaatgcgttt
cattatgatacgcttgacacatatgctgccgtggataaaactccacttgttttgaaggga
gtgaatggtgatgacctgtacattcacgagatcccggaaaagatcgtattccactatgaa
tcacgtaataatgattgtgggatgcttcttacttgccaactgagtggtaaaatgaaggtc
gtcggtatgctagttgccgggaaagacaaaactagctgggcttgcattttgcccaacccc
caccttgccgagctcaagagccaaattgaatatattcctgagtttggtgaggcggaggaa
gggtattttaaggtagggcacgtgtctccaaaagaggctcccacgatgcccaagaagacc
aattccgtgcaggttccacaagcacttcgtgtgccgtgtgacctacctataaaagagcct
tctattattagcaagaatgaccctcgttgtcctgctaatgtagatcctcccaaggctgca
atgaaaaagaaattccaacagcctatgttggatttggatcagaagtgccttgatgaaatt
gctggggatatgttggaaacatggtatgattgtgaagattcaatcctcagcgatattccc
cttgcaactgccataaatgggattcccgctggatgtgaagatgcggagcttgaaaacttc
gtaatgaaaacatctcccggttatccctatttcaagaacaagggattgggaaaaggaaag
cacccctactttgaggagtgtgaggatggatctctcaaactcaaagagggatctcaagct
gctgagttatatgaaaatatggcccagtttgccaaggaagaagttcctgagctcgttgtt
atcgaatgtcccaaagacgagcttcttcctgcccggaaaatcaaggttggcccctgtagg
ttgtttgaaataatgcccttgcattacaacctcctattgcgtgttaaaacgtgtgccttt
actgctttcctgcagcacaataggcatcgccttccttgtcaagttggcaccaatccttat
tccagggagtggggtcacttgctaaatcggttacgcagggtcaaaaccaacgaggccatc
aattgtgattactctggcttcgatggtttgctaacaccccagttggtggagatgatggca
aaaatgataaatcggctatatcttcgctctggagaaagtgaggtcatgcaagcgcagaga
ttgaatatgattatggcgctgtgtggtcgatacgcccttgtggggacacaggtttacaaa
gtgaactgcggtcttccgtctgggtttgctttaacagttgtgatgaattccatttttaat
gagattctgatccgatatgcttataagacattggccccgactccagagaaaaattctttt
gggatcaatgtttgtttattggtgtatggtgatgataatctcatttctgtatctccagct
gttgcctcctggtttactggtgaggccattcgcgtcactcttgccgaaaagcggattaag
attaccgatggtagtgacaaggatgcgcctactattgaggctaagcccttttctgaactt
gactttctcaaaagaaaattttatgttcacccagaacacggtcaagtttgggcccccctg
gataagtcagcaatcttctcatgtttgcattggcttaccccccaaaaatccaaatttgcc
ctccaagaaaaggcttgtgactatcttggagaggtcgatgtcgttgaggagttgattata
aatgtcaatgtctcgcttgtagagctttatctccacaacgataaagaagaatttaatagg
gtgcgcagcttttacattgcgcgtctacctatgcaggtggaccaatttcgcacctgggct
ttttgtgaggcctttcactctgcgcagcaaactggtatgttgcgtcatgatccagctaaa
attcttgattcactggctggaccagaattccctcgttttatgaggtgttctggtgagggt
gataaagcccatttttacacccctatcttgggagtttgtggaccacattataaaccgaag
gagcaggattttcttgtttctactttacccattaaacagggagaaggtgtccacattcct
attaagataggaggaggagttgggggtttgcctacgcaccaatgggttaaaaattttggt
agaccctcacaactcaaaaacaacgatggttatgcctgttacaaacttttgtgtgaacaa
atagaacagggtaagcgtcttgttttcatgtctgctgctccctatgtggccggaaatgct
gcattgatttcatttggtagtagcaggaaaattctcaaggagcagatgcccctatgccat
tatagaaattctatcccagaatctgttgatgggcttacggggtattttgatgctcctctt
cctgctgccaccattggaaaatcttattttgccaatggggagacctatgccgccctgtgc
gaattcaagaacggagaagttcttgacatagttggccccaccaacgttcaaatcttgaat
ggggcagtcagacagggaaaagtgccttgcctggcagcacattccgtggggaccaagttc
aaggtttctctggtgtgcaacaagaccatgtgtccccaccaccaccatacggggcccact
tttgaacaggcatttcgcacttgctggctcagcaaatgtaaaaccaaggagacacaagta
tcaccttggtttggtacaaaattcttaggcatttcttga
DBGET
integrated database retrieval system
