Viruses: 962129
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Entry
962129 CDS
T40000
Symbol
TRVs1gp2
Name
(RefSeq) Tobacco rattle virus; 134 kDa protein
Virus
12295
Tobacco rattle virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Vmethyltransf
Viral_helicase1
UvrD_C_2
Phage_holin_3_3
Motif
Other DBs
NCBI-GeneID:
962129
NCBI-ProteinID:
NP_620670
RS:
NC_003805
UniProt:
Q9J942
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All DBs
Position
NC_003805:203..3766
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AA seq
1187 aa
AA seq
DB search
MANGNFKLSQLLNVDEMSAEQRSHFFDLMLTKPDCEIGQMMQRVVVDKVDDMIRERKTKD
PVIVHEVLSQKEQNKLMEIYPEFNIVFKDDKNMVHGFAAAERKLQALLLLDRVPALQEVD
DIGGQWSFWVTRGEKRIHSCCPNLDIRDDQREISRQIFLTAIGDQARSGKRQMSENELWM
YDQFRKNIAAPNAVRCNNTYHGCTCRGFSDGKKKGAQYAIALHSLYDFKLKDLMATMVEK
KTKVGHAAMLFAPESMLVDEGPLPSVDGYYMKKNGKIYFGFEKDPSFSYIHDWEEYKKYL
LGKPVSYQGNVFYFEPWQVRGDTMLFSIYRIAGVPRRSLSSQEYYRRIYISRWENMVVVP
IFDLVESTRELVKKDLFVEKQFMDKCLDYIARLSDQQLTISNVKSYLSSNNWVLFINGAA
VKNKQSVDSRDLQLLAQTLLVKEQVARPVMRELREAILTETKPITSLTDVLGLISRKMWK
QFANKIAVGGFVGMVGTLIGFYPKKVLTWAKDTPNGPELCYENSHKTKVIVFLSVVYAIG
GITLMRRDIRDGLVKKLCDMFDIKRGAHVLDVENPCRYYDINDFFSSLYSASESGETVLP
DLSEVKAKSDKLLQQKKEIADEFLSAKFSNYSGSSVRTSPPSVVGSSRSGLGLLLEDSNV
LTQARVGVSRKVADEEIMEQFLSGLIDTEAEIDEVVPAFSAECERGETSGTKVLCNLLTP
PGFENVLPAVKPLVSKGKTVKRVDYFQVMGGERLPKRPVVSGDDSVDARREFLYYLDAER
VAQNDEIMSLYRDYSRGVIRTGGQNYPHGLGVWDVEMKNWCIRPVVTEHAYVSNPDKRMD
DWSGYLEVAVWERGMLVNDFAVERMSDYVIVCDQTYLCNNRLILDNLSALDLGPVNCSFE
LVDGVPGCGKSTMIVNSANPCVDVVLSTGRAATDDLIERFASKGFPCKLKRRVKTVDSFL
MHCVDGSLTGDVLHFDEALMAHAGMVYFCAQIAGAKRCICQGDQNQISFKPRVSQVDLRF
SSLVGKFDIVTEKRETYRSPADVAAVLNKYYTGDVRTHNATANSMTVRKIVSKEQVSLKP
GAQYITFLQSEKKELVNLLALRKVAAKVSTVHESQGETFKDVVLVRTKPTDDSIARGREY
LIVALSRHTQSLVYETVKEDDVSKEIRESAALTKAALARFFVTETVL
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacggtaacttcaagttgtctcaattgctcaatgtggacgagatgtctgctgag
cagaggagtcatttctttgacttgatgctgactaaacctgattgtgagatcgggcaaatg
atgcaaagagttgttgttgataaagtcgatgacatgattagagaaagaaagactaaagat
ccagtgattgttcatgaagttctttctcagaaggaacagaacaagttaatggaaatttat
cctgaattcaatatcgtgtttaaagacgacaaaaacatggttcatgggtttgcggctgct
gagcgaaaactacaagctttattgcttttagatagagttcctgctctgcaagaggtggat
gacatcggtggtcaatggtcgttttgggtaactagaggtgagaaaaggattcattcctgt
tgtccaaatctagatattcgggatgatcagagagaaatttctcgacagatatttcttact
gctattggtgatcaagctagaagtggtaagagacagatgtcggagaatgagctgtggatg
tatgaccaatttcgtaaaaatattgctgcgcctaacgcggttaggtgcaataatacatat
cacggttgtacatgtaggggtttttctgatggtaagaagaaaggcgcgcagtatgcgata
gctcttcacagcctgtatgacttcaagttgaaagacttgatggctactatggttgagaag
aaaactaaagtgggtcatgctgctatgctttttgctcctgaaagtatgttagtggacgaa
ggtccattaccttctgttgacggttactacatgaagaagaacgggaagatctatttcggt
tttgagaaagatccttccttttcttacattcatgactgggaagagtacaagaagtatcta
ctggggaagccagtgagttaccaagggaatgtgttctacttcgaaccgtggcaggtgaga
ggagacacgatgcttttttcgatctacaggatagctggagttccgaggaggtctctatca
tcgcaagagtactaccgaagaatatatatcagtagatgggaaaacatggttgttgtccca
attttcgatctggtcgaatcaacgcgagagttggtcaagaaagacctgtttgtagagaaa
caattcatggacaagtgtttggattacatagctaggttatctgaccagcagctgaccata
agcaatgttaaatcatatttgagttcaaataattgggtcttattcataaacggggcggcc
gtgaagaacaagcaaagtgtagattctcgagatttacagttgttggctcaaactttgcta
gtgaaggaacaagtggcgagacctgtcatgagggagttgcgtgaagcaattctgactgag
acgaaacctatcacgtcattgactgatgtgctgggtttaatatcaagaaaaatgtggaag
cagtttgctaacaagatcgcagtcggcggattcgttggcatggttggtactctaattgga
ttctatccaaagaaggtactaacctgggcgaaggacacaccaaatggtccagaactatgt
tacgagaactcgcacaaaaccaaggtgatagtatttctgagtgttgtgtatgccattgga
ggaatcacgcttatgcgtcgagacatccgagatggactggtgaaaaaactatgtgatatg
tttgatatcaaacggggggcccatgtcttagacgttgagaatccgtgccgctattatgat
atcaacgatttctttagcagtctgtattcggcatctgagtccggtgagaccgttttacca
gatttatccgaggtaaaagccaagtctgataagttattgcagcagaagaaagaaatcgct
gacgagtttctaagtgcaaaattctctaactattctggcagttcggtgagaacttctcca
ccatcggtggtcggttcatctcgaagcggactgggtctgttgttggaagacagtaacgtg
ctgacccaagctagagttggagtttcaagaaaggtagccgatgaggagatcatggagcag
tttctgagtggtcttattgacactgaagcagaaattgacgaggttgttccagccttttca
gctgaatgtgaaagaggggaaacaagcggtacaaaggtgttgtgtaaccttttaacgcca
ccaggatttgagaacgtgttgccagctgtcaaacctttggtcagcaaaggaaaaacggtc
aaacgtgtcgattacttccaagtgatgggaggtgagagattaccaaaaaggccggttgtc
agtggagacgattctgtggacgctagaagagagtttctgtactacttagatgcggagaga
gtcgctcaaaatgatgaaattatgtctctgtatcgtgactattcgagaggagttattcga
actggaggtcagaattacccgcacggactgggagtgtgggatgtggagatgaagaactgg
tgcatacgtccagtggtcactgaacatgcttatgtgtccaacccagacaaacgtatggat
gattggtcgggatacttagaagtggctgtttgggaacgaggtatgttggtcaacgacttc
gcggtcgaaaggatgagtgattatgtcatagtttgcgatcagacgtatctttgcaataac
aggttgatcttggacaatttaagtgccctggatctaggaccagttaactgttcttttgaa
ttagttgacggtgtacctggttgtggtaagtcgacaatgattgtcaactcagctaatcct
tgtgtcgatgtggttctctctactgggagagcagcaaccgacgacttgatcgagagattc
gcgagcaaaggttttccatgcaaattgaaaaggagagtgaagacggttgattcttttttg
atgcattgtgttgatggttctttaaccggagacgtgttgcatttcgatgaagctctcatg
gcccatgctggtatggtgtacttttgcgctcagatagctggtgctaaacgatgtatctgt
caaggagatcagaatcaaatttctttcaagcctagggtatctcaagttgatttgaggttt
tctagtctggtcggaaagtttgacattgttacagaaaaaagagaaacttacagaagtcca
gcagatgtggctgccgtattgaacaagtactatactggagatgtcagaacacataacgcg
actgctaattcgatgacggtgaggaagattgtgtctaaagaacaggtttctttgaagcct
ggtgctcagtacataactttccttcagtctgagaagaaggagttggtaaatttgttggca
ttgaggaaagtggcagctaaagtgagtacagtacacgagtcgcaaggagagacattcaaa
gatgtagtcctagtcaggacgaaacctacggatgactcaatcgctagaggtcgggagtac
ttaatcgtggcgttgtcgcgtcacacacaatcacttgtgtatgaaactgtgaaagaggac
gatgtaagcaaagagatcagggaaagtgccgcgcttacgaaggcggctttggcaagattt
tttgttactgagaccgtcttatga
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