Viruses: 962150
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Entry
962150 CDS
T40000
Symbol
CCMVs2gp1
Name
(RefSeq) Cowpea chlorotic mottle virus; 2a protein
Virus
12303
Cowpea chlorotic mottle virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
RdRP_2
BBMV_Gp1_N
RdRP_3
Motif
Other DBs
NCBI-GeneID:
962150
NCBI-ProteinID:
NP_613275
RS:
NC_003541
UniProt:
P20179
LinkDB
All DBs
Position
NC_003541:110..2536
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AA seq
808 aa
AA seq
DB search
MSKFIPEGETYHVPSFQWMFDQTLESDSHHDEAIFVTESINESGVDTSVEITADGTLASY
MHAVKPLVEDGLLNPPFDQARWGLCCKNVVDVYDGLLGYRLIPMAEAARMLYLEIDGSFV
DESECDDWRPVDTSDGFTEAMFDVMNEIPGEETKNTCALSLEAESRQAPETSDMVPSEYT
LADRYVTTREEFASVDSDYDISLNLVSPVEFRVGVCEDTYRHSEADDPTMPQYHDRISLK
SLEAAGHHMLPTHAYFDDTYYQALEELGDYNVDISKLSVRQSDVDWYRDPEKYYEPELSI
GSFQRRIGTQKTVLTALKKRNADVPELADSVDIKRVACEVAEKFKRAYLNHSGIGLLGQS
MDVMSRGLEYHKKWKDHKDLTGVTVLSEINLQRYQHMIKSDIKPVVSDTLHLERAVAATI
TFHGKGVTSCFSPYFTACFEKFSKALKSRFVVPIGKISSLELKNVPLSNKWFLEADLSKF
DKSQGELHLEFQREILLSLGFPAPLTNWWCDFHRESMLSDPHAGVNMPVSFQRRTGDAFT
YFGNTLVTMAMMAYCCDMNTVDCAIFSGDDSLLICKSKPHLDANVFQSLFNMEIKVMDPS
LPYVCSKFLLETEMNNLVSVPDPMREIQRLAKRKIIKSPELLRAHFESFCDRMKFLNKLD
EKMINLLCKFVALKYKKPDVENDVRVAIAAFGYYSENFLRFCECYATEGVNIYKVKHPIT
QEWFEASRDRDGDWFHDWRNPKFPTALDKVWRFFGKYARDDPMKHIEERDRRHRLNRAMN
SSLKLAYDRRSLSKDKETVAWVRKTLSK
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagttcattccagaaggtgagacttaccacgttccctcattccaatggatgttt
gatcagactctcgaatctgactcacaccatgatgaggcgatattcgtaaccgaatcgatt
aatgaaagtggagttgatacttctgttgaaataaccgcagatggcacgctagcaagttat
atgcatgccgtaaagcccctagtggaggatggtcttctgaatcccccttttgatcaagct
agatggggtctttgctgcaagaacgtcgttgacgtttatgacgggctgctcggttataga
ctcataccaatggctgaagccgctagaatgttgtacttggaaatcgacggttcattcgtt
gatgaatctgagtgtgacgattggcggccggtagatacctctgatggtttcaccgaagca
atgtttgatgtgatgaatgagattcctggcgaggaaacaaaaaatacatgcgctttaagt
cttgaagctgaatcaaggcaagctccagaaacttccgatatggtgccgtctgaatatacg
ttggcagataggtacgttaccaccagagaggagttcgcgtctgttgactcggattatgac
atatccttaaacctggtgagccctgtggagttcagggtgggagtgtgtgaagacacatac
cgtcattcggaagctgatgatcctacgatgcctcaatatcacgataggatcagtttaaaa
tcgctggaggcggctggccatcacatgttaccgactcatgcctattttgacgacacttac
taccaggctttggaagagctaggcgattataatgtcgatattagtaagttgtctgtccgg
cagagtgatgttgattggtatcgtgaccctgaaaagtactatgagcctgagttaagtata
gggtcattccaacgtagaataggtacgcaaaagacggtccttaccgcgttaaagaaacgg
aacgctgacgtgcctgagttagcagattctgttgatattaaaagagtagcctgtgaagta
gctgaaaaatttaaacgggcttatcttaatcattccggtatagggctgttagggcaaagt
atggatgtcatgtccagaggacttgagtaccataagaaatggaaagaccacaaagacctg
actggtgtgacagttttgtctgagattaatttgcagaggtatcagcacatgataaagtct
gatattaaaccagttgtctcggatacgttacacctcgaacgagctgttgctgcaacaata
acatttcatggtaaaggagttactagctgcttctcaccatattttacggcttgtttcgag
aagttttcaaaagctttaaaatcaaggtttgtggtccccatagggaagatctcctccctg
gaactgaaaaatgttcccctctcgaataaatggtttcttgaggcggatttgagtaagttt
gataaatctcagggtgagcttcatcttgagttccaaagagagatattgttgtcattgggt
tttccagcccctttgactaattggtggtgtgatttccatagggaatctatgctatcggat
cctcatgctggagttaacatgccagtttcctttcagcgtcgtactggtgatgcttttact
tattttgggaatactttggtgactatggccatgatggcctattgttgcgatatgaacacc
gtggactgtgctatcttttccggtgatgattctctgttaatttgtaaaagtaaaccacat
ctggatgctaatgtttttcaatctctgtttaatatggaaattaaagttatggacccaagt
ttgccatacgtttgtagtaagtttcttttagaaactgaaatgaataacttggtgtctgtg
cctgatcctatgagagagatacagagactggctaagcgaaagatcatcaaatcgcctgag
ttgttaagagcccactttgagtccttttgtgataggatgaaattcctaaacaaattggat
gaaaaaatgataaatttattatgcaagtttgtggctctcaagtataaaaaacctgacgtt
gaaaacgatgtcagagtagccattgctgctttcggctactactcagaaaatttcttgaga
ttttgcgaatgttatgcgactgaaggggtcaatatatataaggtaaaacatcccatcacc
caggagtggttcgaggcctctagggatcgagacggtgactggttccatgactggcgtaat
ccgaagtttcccactgccttagataaggtttggagattctttggaaaatacgcgagagat
gatcctatgaagcacatagaagagagagataggagacataggcttaatcgagccatgaat
tcttccttgaaacttgcctatgatcgtaggagtcttagtaaggataaagaaaccgttgcg
tgggtgcgtaagaccctttctaaataa
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