Viruses: 962641 Help Entry 962641            CDS       T40000                                  Symbol CMVs1gp1 Name (RefSeq) Cucumber mosaic virus; replicase Virus 12305  Cucumber mosaic virus Taxonomy SSDB OrthologParalogGFITVOGVOG cluster Motif Pfam:  CMV_1a Vmethyltransf CMV_1a_C Viral_helicase1 AAA_30 Chropara_Vmeth AAA_19 Motif Other DBs NCBI-GeneID:  962641 NCBI-ProteinID:  NP_049323 RS:  NC_002034 UniProt:  P17769 LinkDB All DBs Position NC_002034:95..3076 Genome browser AA seq 993 aa AA seqDB search MATSSFNINELVASHGDKGLLATALVDKTAHEQLEEQLQHQRRGRKVYIRNVLGVKDSEV IRNRYGGKYDLHLTQQEFAPHGLAGALRLCETLDCLDSFPSSGLRQDLVLDFGGSWVTHY LRGHNVHCCSPCLGIRDKMRHAERLMNMRKIILNDPQQFDGRQPDFCTQPAADCKVQAHF AISIHGGYDMGFRGLCEAMNAHGTTILKGTMMFDGAMMFDDQGVIPELNCQWRKIRSAFS ETEDVTPLVGKLNSTVFSRVRKFKTMVAFDFINESTMSYVHDWENIKSFLTDQTYSYRGM TYGIERCVIHAGIMTYKIIGVPGMCPPELIRHCIWFPSIKDYVGLKIPASQDLVEWKTVR ILTSTLRETEEIAMRCYNDKKAWMEQFKVILGVLSAKSSTIVINGMSMQSGERIDINDYH YIGFAILLHTKMKYEQLGKMYDMWNASSISKWFAALTRPLRVFFSSVVHALFPTLRPREE KEFLIKLSTFVTFNEECSFDGGEEWDVISSAAYVATQAVTDGKILAAQKAEKLAEKLAQP VSEVSDSPETSSQTPDDTADVCGREREVSELDSLSAQTRSPITRVAERATAMLEYAAYEK QLHDTTVSNLKRIWNMAGGDDKRNSLEGNLKFVFDTYFTVDPMVNIHFSTGRWMRPVPEG IVYSVGYNERGLGPKSDGELYIVNSECVICNSESLSTVTRSLQAPTGTISQVDGVAGCGK TTAIKSIFEPSTDMIVTANKKSAQDVRMALFKSSDSKEACTFVRTADSVLLNECPTVSRV LVDEVVLLHFGQLCAVMSKLKAVRAICFGDSEQIAFSSRDASFDMRFSKIIPDETSDADT TFRSPQDVVPLVRLMATKALPKGTHSKYTKWVSQSKVKRSVTSRAIASVTLVDLDSSRFY ITMTQADKASLISRAKEMNLPKTFWNERIKTVHESQGISEDHVTLVRLKSTKCDLFKQFS YCLVALTRHKVTFRYEYCGVLNGDLIAECVARA NT seq 2982 nt NT seq  +upstreamnt  +downstreamnt atggcgacgtcctcgttcaacatcaatgaattggtagcctcccacggcgataaaggacta ctcgcgaccgccctcgttgataagacagctcatgagcagctcgaggagcaattacagcat caacgtagaggccgtaaggtctacatccggaacgttttgggtgtaaaggattccgaggtc atccggaatcggtatggaggaaagtacgacctccatcttacccagcaggagtttgctccc cacggcctagctggtgccctccgcttgtgtgaaactctcgattgtctagactctttccct tcatcaggtctgcggcaggacctcgtcttagacttcggaggaagttgggtcacacattac ctccgcggacataacgtacactgttgttccccttgtttgggtatccgcgataagatgcgc catgcggaacgcttaatgaacatgcgcaagatcatcttgaacgatccacaacagttcgat ggtcggcagccggatttctgcactcaaccggctgcggattgcaaagtacaagcccacttt gctatatctattcatggaggttatgatatgggctttagaggattatgtgaagcgatgaat gctcacggaaccactattttgaagggaacgatgatgttcgatggtgcgatgatgtttgac gaccaaggtgtaatacccgaacttaattgtcagtggaggaagatcaggagtgctttctcc gaaactgaagacgtcacaccactggttggtaagcttaattccacagttttctcccgcgtg cggaagttcaagacgatggtagcttttgatttcatcaacgagtctactatgtcttatgtt catgattgggagaatataaaatcttttcttacggaccagacttattcgtaccgagggatg acttacggtatcgaacgctgcgttatccacgctggtattatgacgtacaagattatcggt gtacctgggatgtgcccacccgaactcattcgacattgtatttggttcccctctattaaa gactatgttggtctaaagatccccgcgtcgcaggatttggttgagtggaaaacagtgcgg attttaacgtcaacattacgtgagactgaagagattgctatgaggtgttataatgataag aaagcgtggatggaacagttcaaggttatcctaggtgttctatccgcgaaatcatctacc attgttattaatggtatgtccatgcaatctggcgagcgaatagacattaatgattatcac tacatcggtttcgccattcttcttcacacaaaaatgaagtacgaacaacttggaaaaatg tatgatatgtggaatgcttcgagtatttcgaagtggtttgccgcgttgactcgtccgctg cgtgtgtttttctccagtgttgttcacgcactattcccgactttgagaccccgcgaggaa aaagaatttttgatcaagctctccaccttcgtgacttttaatgaagagtgctcatttgac ggtggagaggaatgggacgtgatatcatccgctgcatacgttgctacgcaggctgttacc gatgggaagattttggctgcgcagaaagccgagaagcttgctgagaagcttgcacaaccc gtgagtgaggtatcggacagtcctgagacgtcatctcaaacgcctgatgatactgctgat gtttgtggaagggagcgagaggtttcggaactcgactccctatcagctcagacacgttcc cccatcactagagttgctgaaagggctactgctatgttagagtatgccgcttatgagaaa caattgcacgacactacagtgtctaatttaaaacgtatttggaacatggcgggcggtgat gacaaaagaaactccctcgagggtaatttgaagtttgttttcgatacgtactttaccgtt gatcctatggtgaacattcatttctccacgggtcggtggatgcgtcctgtgcccgagggt attgtttattctgtcggttataatgaacgcggtttaggtccgaagtctgatggagagctt tacattgtcaatagtgaatgcgtgatctgtaacagtgaatctttatccactgtcacgcgt tctcttcaagctccaaccgggaccattagtcaagttgacggagttgctggttgtgggaaa accacggcaattaaatccatttttgagccgtccactgacatgatcgttaccgcgaacaag aagtccgcccaagatgtacgtatggcacttttcaaatcgtcggattccaaagaagcttgc acctttgttcgaacagccgattctgtcctacttaatgaatgtccgactgttagtagggtt ttggttgacgaggtcgttctgctacactttggtcaattatgtgccgtcatgtctaagttg aaggccgtgcgagctatatgttttggggattcggagcagattgccttttcctcgcgtgat gcttcatttgacatgcgtttctctaagattattcctgatgaaactagtgatgctgacacc acattccgtagcccacaagatgttgtaccgcttgtgcgtttaatggctacgaaggccctt ccgaaaggaacccattcaaaatacacgaaatgggtttctcaatctaaagtgaaaagatct gttacatctcgtgccatcgctagtgtgacattggttgacttggattcttccaggttctat ataacgatgacccaagctgataaggcctcactgatttcaagggcgaaagagatgaatcta ccaaagactttctggaatgaaaggattaaaaccgtgcatgagtctcagggtatctccgaa gaccacgttactttggtaagattaaagagtacaaaatgtgacctgtttaaacagttttct tattgtctcgttgcactgacgagacacaaggtcacattccgctacgagtactgtggtgta ttgaacggcgatttaatcgccgaatgtgttgctcgtgcttag

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