Viruses: 962656
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Entry
962656 CDS
T40000
Symbol
TbSVs2gp1
Name
(RefSeq) Tobacco streak virus; putative viral polymerase
KO
K26630
Ilarvirus RNA-directed RNA polymerase
Virus
12317
Tobacco streak virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
RdRP_2
Motif
Other DBs
NCBI-GeneID:
962656
NCBI-ProteinID:
NP_620768
RS:
NC_003842
UniProt:
P89678
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Position
NC_003842:42..2444
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AA seq
800 aa
AA seq
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MDLVIKNLIVYHLRRRIDIGTSFGIEPADYIDWVKVFLLKFIIEHTARFADFATIHTTML
LVLGEDDPNYVEKDTPIMEIDPFYLPYDDLDVDYTSLRVCGDEDQSCSDRDELSDFISNI
SHIPEGTSWGSESDTSFVEHLETIQDIPTKCEIADKPVEEIPFDDDGKVVNDVWVDAELS
NAPEISCDADIRACGFVSLRLLESSRGYPKWTPERVSSGLNPDLPVNSKPAVDEIFPHHH
SVDDRFFQEWVETHDIDLEVTSCDLDMSTFNDWTKGVDTRLVPNMSVGGLSHRVPTQREA
LLAIKKRNMNVPELQSNFDHDDVLNRCVTRFITHVVDKTRLSKLNPISGEELHYFNQYLE
NKNPPLSEYKGPVPLVALDKYMHMIKTTLKPVEEDNLHIERPIPATITYHKKGVVMMTSP
YFLCAMVRLLYVLKSKFVVPTGKYHQIFQMNPELLKHSKEFKEIDFSKFDKSQGRLHHDV
QFRLFLALGIPEHFVTTWFNSHEKSYIRDRDCGIGFSVDYQRRTGDACTYLGNTLVTLSV
LSYVYDLSNPNILFVAASGDDSLIGSIEPLPREKEDLCVSLFNFETKFPHNQPFICSKFL
LVVECDDGSEEVLAVPNPLKLLQKLGPKNLQVTVLDDYYQSLCDILWVFNDADVCRRTAE
LAEYRRFKGTKKCLFLESALLSLPSLVANRMKFVRRTINLESSRACIRNDVYSDLVPHFD
SRVSRCDDSDGVRTSTFDDRKSSKHASDKLRKTECYGEARCRIKPRRNRKSESGAVQYSQ
SSGIETGKANSSRKGRIKLH
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggatctcgttatcaaaaacctcattgtgtatcacttgagaagacgaattgacattggc
acgtcattcggtattgagccggctgattatattgattgggtaaaagtttttcttttgaaa
ttcataatagaacatacagccaggtttgctgattttgccaccattcacaccacgatgttg
ttagtactgggtgaagatgatccaaattacgtagagaaggacactccaataatggagatt
gaccccttctatttaccgtatgatgatcttgacgtggactatacttcattgcgtgtgtgt
ggtgatgaagaccaatcctgttccgaccgtgatgaattgagtgattttatatcaaacatt
tcacacatcccagagggtacttcctggggtagtgaatcagatacctcttttgtcgagcat
cttgaaacaattcaagatataccgacaaaatgtgagattgctgataaaccggtcgaagaa
attccatttgacgatgatggtaaagtcgtaaatgatgtatgggttgatgccgagctttca
aacgctccggaaatctcctgtgatgccgacatacgcgcttgtggatttgtttccttacgc
ctcctggaaagttcccgaggttatccgaaatggacccccgaaagggtgagttcaggttta
aaccccgaccttcctgttaattccaagcccgcggttgatgagattttcccccaccaccac
tctgttgacgacagattcttccaagaatgggttgaaacccatgacattgacttggaagtc
acgagttgcgacctcgatatgtccacatttaatgattggacaaaaggggttgacactcga
ttggtaccaaacatgagtgtcggtggtttgtcccacagggttccaacacagcgtgaagct
ttgttggcaataaagaaaaggaatatgaatgttcctgaacttcaaagcaatttcgatcac
gatgatgttttaaaccgatgtgttactagattcataacacatgtcgttgataagactcga
ttatcgaaattgaatccgatatctggtgaagagttacattacttcaaccagtatttggaa
aataaaaatccgcctttaagtgaatacaaaggcccggtgccattggtggctttagataag
tatatgcacatgataaagaccaccttgaagccagtggaagaggataacctccacattgaa
cgaccgattcccgcgactatcacttatcacaagaaaggagttgtcatgatgacttctcca
tattttctgtgcgcgatggtcaggttgctttatgtgttaaagtcaaaatttgttgtgcca
actggaaaataccaccagatctttcaaatgaatcccgagttgttgaaacactcgaaggaa
tttaaagagattgatttttcaaaattcgataaatctcaaggtcgattacaccatgatgtg
cagtttcgtcttttcttagctcttggtataccggagcattttgtaactacttggttcaat
tcccatgaaaaaagttacattagagatcgagactgcggtatcggattttccgttgattat
cagcgacgaactggtgatgcatgcacctaccttgggaacactttggtaacattaagtgtt
ctcagttatgtgtatgatttatcaaatccaaatattttatttgttgccgccagtggcgat
gacagtttaattggatctattgaacccttaccgcgtgaaaaagaggatttgtgcgtgtcc
cttttcaattttgaaacaaaatttcctcacaaccaaccattcatttgttcgaagttctta
ttggttgttgagtgcgatgatgggtctgaagaagttttagcagttcccaatcctctgaaa
cttcttcaaaaacttggtcctaagaaccttcaagtcactgttttagatgactattatcaa
agtctttgtgacattttgtgggtttttaatgatgccgacgtgtgtcgaagaaccgccgaa
ttggcggaatacagacgtttcaaaggaactaagaaatgtctgtttctggagtccgctctt
ctgagcttgcctagtttagtggcgaacaggatgaaatttgttcgaagaactatcaattta
gagagttctagagcttgtattcgaaacgatgtttattccgatcttgttcctcactttgac
tctcgcgtcagcagatgtgatgactctgatggagtccgaacctcaaccttcgacgacaga
aagtcgtccaagcatgcctccgataaactcaggaaaaccgagtgttacggagaagcccgg
tgtagaattaaaccccggagaaaccgtaaaagtgaaagcggagcagttcaatacagtcaa
tccagtggaattgaaactggaaaagcgaattcctcccggaagggtaggatcaaattgcat
tga
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