Viruses: 962658
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Entry
962658 CDS
T40000
Symbol
TbSVs1gp1
Name
(RefSeq) Tobacco streak virus; putative viral replicase
KO
K26863
Ilarvirus methyltransferase/helicase
Virus
12317
Tobacco streak virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Vmethyltransf
Viral_helicase1
Chropara_Vmeth
AAA_30
AAA_19
NACHT
UvrD_C_2
Motif
Other DBs
NCBI-GeneID:
962658
NCBI-ProteinID:
NP_620772
RS:
NC_003844
UniProt:
P89680
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All DBs
Position
NC_003844:38..3322
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AA seq
1094 aa
AA seq
DB search
MDSLSLPTVCDVVVPALNVDNLIRDYVSNVRADDSNNVSRFLGEVALKEIKSQVDTSNGD
FQKLNVGFRLTPDEKNALKANFPGLEIAFRDSCHSSHSFAAAHRVCETLNIYNRFKTKTE
RIIDLGGNYVTHAKQGRSNVHSCCPILDVRDGARHTDRYISLAASVENRHRELPVDFCCH
KFEECDVKAPFAMAIHSISDIPISTVATHCVRRGVRKLIASVMMDPLMMLYDKGHIPLLN
VDWEKEDVEETGKTLIHFHFVDAPGLSYSHDFDTLSQYMITNQVIVNNSYSFRVERTACL
SGVYIVEMTLSMTDGHSLAYLKPMRDVSCAWLSSLRKKVFVKLAVPISAEWYTEQFEVRH
ALMDESLVRYVSEAAFRQFSKTKDPETLVQYIATMLSSSSNHVVINGITMRSGSPIKFDE
YVPLAVTFYVMAAWRYKMIAPGIDAVKTRTEKNVDILDEKGLIKEDFNVVNALLEDAGLI
EPKLPHFTDVIKNAGLRGFGKKTIEKTRDDVLLIKPRSLLREVIYTVRSVFGLTILDSDY
NLVSGVPSHMKATHVWSVFVGNLAFPSCLNVNECVNELLVNHMEMMEETKKEETRQQAFK
DARDRALMTIAKAIEKDQTIKDGLLPILDLCKIKEELTAASNSLSLTPEAIEQTDSRLMK
ASGSDVNPYADSIKEAIHYFNEVEVANTRNLRSLGIYLGWSIPKNKQTYDALQGRNESVR
VYVPYENKWYPSAPTSQYERAMTVDGYFSLPMEFEAITDGCRREISKYHLLVVDDSCIFC
SGQRMIPALEAALKLVPTFKITIVDGVAGCGKTTHLKKIARIDSSAAGSPDLVLTSNRSS
SDELKEVIDCPDVMKYRIRTVDSYLMLKSWFSAERLLFDECFLTHAGCVYAAATLAQVKE
VIAFGDTEQVPFISRLPEFRMEHHKVKGKISCTTDHLQMSKRCHSLFKENFLQKQDCEVS
ERCSSLAELCPIQSVIQIQPERDVLYMTHTRADKETLMRIPGMPKDRIKTTHEAQGETWD
HVVMFRLSKTTNLLHSGKGPDLGPCHNLVAISRHRKSFRYFTVAPHDNDDQIVKCINYAR
SLSSGDLDGVRVLI
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atggattccttatctttacccaccgtgtgtgacgttgttgttccggctttgaacgttgac
aatctcattcgagattatgtcagtaatgtgagagccgatgatagcaacaacgtcagccgc
ttccttggtgaagtagccctgaaagaaattaaatctcaggtagacaccagtaatggtgat
ttccagaagttgaacgtcggttttcgtttgactcctgatgagaaaaatgcactgaaagcg
aattttcccggtctcgaaattgcgtttagagactcgtgtcattcgtcacacagttttgcc
gcagctcatagagtctgtgagaccctaaatatatacaatcggtttaaaacaaaaaccgag
cgcattatcgatcttggcggtaactatgttacacacgccaaacaaggtcgttctaatgtg
cattcctgctgtcccatccttgatgttagggacggtgctaggcataccgatcggtatata
tctttagctgcctctgttgagaatcgccacagagagttaccagttgatttctgttgccat
aagtttgaggagtgtgatgttaaggcaccttttgccatggctatccattccatcagtgac
attcccatctcaacggtcgcgacacattgcgttaggcgtggtgtgcggaaacttattgcg
tccgttatgatggatccacttatgatgctttatgacaagggtcatatacctttactcaat
gttgattgggaaaaagaggacgttgaagaaacgggaaaaacactcattcatttccatttt
gttgacgctcccgggttgagctattcacacgattttgatacactgtcccaatacatgatt
acaaaccaggttattgttaataattcctactcttttagggtagagaggacagcctgttta
tcaggtgtgtatatcgtggagatgactttgtctatgacagacggtcattctttagcttac
ctgaagcccatgcgtgatgtttcatgcgcttggttgtcaagtttgaggaagaaagtcttc
gttaaattagccgtacctattagtgccgaatggtatactgaacaattcgaagttaggcac
gcgctaatggacgagtcattagttcgctatgtttccgaagctgctttccgacagttttcg
aagacaaaagaccccgaaacactggttcagtacatagcaactatgttatcttcttcatca
aatcacgtggtcataaacggaataacgatgcgaagtggtagccctataaaatttgatgaa
tatgttccattagccgttactttctatgttatggccgcgtggcgttacaaaatgattgcc
cctggtatcgatgctgtaaaaacaagaaccgagaagaacgttgatattctcgatgagaag
ggtcttatcaaggaagactttaatgttgtcaatgcgcttcttgaagacgctgggttaatt
gaacccaagttgccccatttcacggatgtcataaaaaacgcaggactccgaggatttggg
aagaaaacgatcgaaaaaaccagggatgatgttttattgataaaaccaaggagcctgttg
cgtgaagtgatttacacggtccgaagtgttttcgggctcacgattttagactcggactac
aatttggtttccggtgttccttctcacatgaaggcgactcatgtgtggtctgtttttgtc
ggaaatcttgcattcccatcttgcctcaacgtcaatgagtgtgttaacgagttacttgtt
aatcacatggaaatgatggaagagacaaagaaggaagaaacacgtcaacaggcctttaag
gatgccagagatcgtgctctgatgacgatagcgaaagctattgagaaagatcaaactatc
aaagatggtttgttaccgattcttgacctttgtaaaattaaagaagaattgacggcggcc
tcgaattccttgagcttgactccagaggccattgaacaaacagattcgagattgatgaaa
gcctccggaagcgacgtcaatccatatgccgattcgataaaagaagccatccattacttt
aatgaagtggaagtggctaacacgagaaatcttcgcagtctgggaatttatcttggatgg
tctattcccaagaataaacagacttacgatgccctacagggtaggaatgaatctgtcagg
gtgtatgtaccatatgaaaataaatggtacccctctgcacccaccagtcagtatgaaagg
gctatgactgttgatgggtatttttcgcttccaatggaattcgaagcgattaccgacggt
tgtagacgtgagatatccaaataccacctcttggttgtcgatgattcgtgtattttctgt
tcaggtcagagaatgatcccagctttagaagctgccttgaaactggtcccaacctttaaa
atcacaattgttgatggtgtcgcgggttgtggaaagactacacatctgaagaagattgca
cgcattgattcaagcgctgcaggtagtcctgatctggtactgacgagtaatcgtagttca
tcagatgagctcaaagaagttatcgactgtcctgatgtgatgaaataccgcattagaacg
gtcgatagttatttgatgctcaaatcctggttttcggctgagcgtctattgtttgatgaa
tgcttcttgacgcatgcgggttgcgtgtatgcagcagccactctggctcaggtgaaagaa
gtaattgcttttggtgacacagagcaagttcctttcatatctagattaccagagtttcgc
atggaacatcataaggttaaagggaagatatcatgtacaaccgaccacttacagatgtcc
aagagatgccacagcttgtttaaagaaaattttctacaaaaacaagactgtgaagtcagc
gagcgttgttcatcgctcgctgaattgtgcccaattcaaagtgtgattcaaattcaaccg
gagcgtgatgttttgtacatgacacacacgcgagcagataaggagaccctgatgagaatt
cccgggatgccgaaagacaggataaaaaccactcatgaagcccaaggagaaacctgggat
catgtggtaatgtttcgtctgtcgaagactacaaatctgctacattcgggtaagggacct
gatttaggtccatgtcacaatttggttgccatatctagacatcggaaatcatttaggtac
tttacagttgcgcctcatgataacgatgatcagatagtgaagtgtatcaattacgctaga
tccttaagttcaggggatttagacggggttcgtgttttaatttga
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integrated database retrieval system
