Viruses: 962668
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Entry
962668 CDS
T40000
Symbol
AMVs2gp1
Name
(RefSeq) Alfamovirus AMV; 89.7 kd protein
KO
K26630
Ilarvirus RNA-directed RNA polymerase
Virus
12321
Alfamovirus AMV
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
RdRP_2
Motif
Other DBs
NCBI-GeneID:
962668
NCBI-ProteinID:
YP_053235
RS:
NC_002024
UniProt:
P03593
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Position
NC_002024:55..2427
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AA seq
790 aa
AA seq
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MFTLLRCLGFGVNEPTNTSSSEYVPEYSVEEISNEVAELDSVDPLFQCYKHVFVSLMLVR
KMTQAAEDFLESFGGEFDSPCCRVYRLYRHFVNEDDAPAWAIPNVVNEDSYDDYAYLREE
LDAIDSSFELLNEERELSEITDRLNALRFFPVSKTEALPVANVQEVKLISETYQLLMTFI
NYSDENIPSEMPAPLLDELGMLPEELGPLNEIEDIKPVAAPITLLSEFRASDNAKPLDIV
EIIPDVSPTKPYEAVISGNDWMTLGRIIPTTPVPTIRDVFFSGLSRHGSPEVIQNALDEF
LPLHHSIDDKYFQEWVETSDKSLDVDPCRIDLSVFNNWQSSENCYEPRFKTGALSTRKGT
QTEALLAIKKRNMNVPNLGQIYDVNSVANSVVNKLLTTVIDPDKLCMFPDFISEGEVSYF
QDYIVGKNPDPELYSDPLGVRSIDSYKHMIKSVLKPVEDNSLHLERPMPATITYHDKDIV
MSSSPIFLAAAARLMLILRDKITIPSGKFHQLFSIDAEAFDASFHFKEIDFSKFDKSQNE
LHHLIQERFLKYLGIPNEFLTLWFNAHRKSRISDSKNGVFFNVDFQRRTGDALTYLGNTI
VTLACLCHVYDLMDPNVKFVVASGDDSLIGTVEELPRDQEFLFTTLFNLEAKFPHNQPFI
CSKFLITMPTTSGGKVVLPIPNPLKLLIRLGSKKVNADIFDEWYQSWIDIIGGFNDHHVI
RCVAAMTAHRYLRRPSLYLEAALESLGKIFAGKTLCKECLFNEKHESNVKIKPRRVKKSH
SDARSRARRA
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgttcactcttttgagatgtctcggattcggtgttaatgaacctactaacacttcctca
tcagagtatgttcccgagtattccgttgaagagatttccaacgaagtcgctgaactcgat
tcagtggatccattattccaatgttacaaacatgtttttgtatcattgatgctcgtaaga
aagatgactcaagctgccgaagacttcctcgagagttttgggggagaattcgatagccct
tgttgtagggtttaccgtctttatagacattttgttaatgaagacgatgcacccgcttgg
gccataccgaatgtcgtgaatgaagattcttacgacgattatgcctacctccgagaggag
ttagatgccatagacagctcttttgagttgctaaacgaagagcgtgagttatcggaaatt
acggacagactcaacgctttaagatttttccctgtttctaaaacagaagcgctaccagtg
gcgaatgtccaagaggtcaaactcatttctgagacataccagttattgatgacctttatt
aactactctgacgagaatattccgtctgaaatgcccgcaccattactggatgagttgggg
atgttaccggaggaacttggacctctgaatgaaattgaagacattaagccggtggcggct
ccaatcacattactatctgagtttagagcctcagataatgctaagccactcgacatagtc
gaaatcattccagacgtaagtccgacgaaaccttatgaagccgtcatatcaggtaatgat
tggatgacgttggggaggatcatacctaccactcccgttcctaccataagggatgtcttc
ttctctggtctttctcggcacggatcgccggaagtgatccagaatgctcttgatgaattt
cttccgctccatcattcaattgatgataagtattttcaagaatgggttgaaacctcagat
aaatctctcgatgtcgatccatgtcgaatcgatctgagtgttttcaacaactggcagtct
tcggaaaactgctatgaacctcggtttaaaaccggtgcattatccacacgtaagggcact
caaactgaagccctattagcgataaagaaacgtaatatgaatgtgcctaacctggggcag
atttatgacgtgaattctgttgctaattccgtggttaataagctcttaacaactgttata
gatcctgataagctgtgcatgtttccagatttcatatctgagggtgaagtttcgtatttc
caggactatatagttgggaagaatcccgaccctgaattatattcagatcctctaggtgtt
cgttccatcgatagctataaacacatgattaaatccgtgttaaagcccgttgaagataat
tctctgcacctagaacggccgatgccagcaaccataacataccatgataaagatatcgtg
atgtcatcttcaccaatttttttggctgctgctgcccgcttgatgttaatcttaagagat
aagataaccataccaagcggaaaattccatcaattgttttccatcgatgctgaagccttt
gatgcaagtttccattttaaagagatagacttttcgaagtttgacaaaagtcaaaatgag
ttgcatcacttgatccaggaaaggtttctgaaatacttaggtatacccaacgaatttcta
accttatggtttaatgcgcatagaaaatcccgaatctcagattcgaagaatggcgttttt
tttaacgtcgatttccaacgtcgtactggagatgcgctcacgtacttgggaaacacaata
gtgacattagcttgtctgtgtcacgtgtatgacttgatggacccaaatgtgaaattcgtt
gttgcttccggtgatgattcattgataggcactgtggaggaattaccaagagatcaagag
tttcttttcacgactctttttaatcttgaagcaaagtttcctcataaccagcctttcata
tgcagtaagtttttgattactatgcccactacaagtggaggcaaagttgtcctgccgata
ccgaatccattgaaactcctcatacgcttgggttcgaagaaagtcaatgccgatatattc
gatgaatggtatcaatcttggattgatataattggtggttttaacgaccaccatgtcatc
cgatgcgttgccgcgatgacagcacataggtatctcagaagaccgagtttatacctagaa
gctgctttggaatccctaggtaagatcttcgctggtaagaccttgtgtaaggaatgcctc
tttaatgagaagcacgagtctaatgtaaaaattaagcctcgtagagtgaaaaaatcccac
tcggatgccaggtcaagggcacgccgagcttga
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