KEGG   Viruses: 962668
Entry
962668            CDS       T40000                                 
Symbol
AMVs2gp1
Name
(RefSeq) Alfamovirus AMV; 89.7 kd protein
  KO
K26630  Ilarvirus RNA-directed RNA polymerase
Virus
12321  Alfamovirus AMV
SSDB
Motif
Pfam: RdRP_2
Other DBs
NCBI-GeneID: 962668
NCBI-ProteinID: YP_053235
RS: NC_002024
UniProt: P03593
LinkDB
Position
NC_002024:55..2427
AA seq 790 aa
MFTLLRCLGFGVNEPTNTSSSEYVPEYSVEEISNEVAELDSVDPLFQCYKHVFVSLMLVR
KMTQAAEDFLESFGGEFDSPCCRVYRLYRHFVNEDDAPAWAIPNVVNEDSYDDYAYLREE
LDAIDSSFELLNEERELSEITDRLNALRFFPVSKTEALPVANVQEVKLISETYQLLMTFI
NYSDENIPSEMPAPLLDELGMLPEELGPLNEIEDIKPVAAPITLLSEFRASDNAKPLDIV
EIIPDVSPTKPYEAVISGNDWMTLGRIIPTTPVPTIRDVFFSGLSRHGSPEVIQNALDEF
LPLHHSIDDKYFQEWVETSDKSLDVDPCRIDLSVFNNWQSSENCYEPRFKTGALSTRKGT
QTEALLAIKKRNMNVPNLGQIYDVNSVANSVVNKLLTTVIDPDKLCMFPDFISEGEVSYF
QDYIVGKNPDPELYSDPLGVRSIDSYKHMIKSVLKPVEDNSLHLERPMPATITYHDKDIV
MSSSPIFLAAAARLMLILRDKITIPSGKFHQLFSIDAEAFDASFHFKEIDFSKFDKSQNE
LHHLIQERFLKYLGIPNEFLTLWFNAHRKSRISDSKNGVFFNVDFQRRTGDALTYLGNTI
VTLACLCHVYDLMDPNVKFVVASGDDSLIGTVEELPRDQEFLFTTLFNLEAKFPHNQPFI
CSKFLITMPTTSGGKVVLPIPNPLKLLIRLGSKKVNADIFDEWYQSWIDIIGGFNDHHVI
RCVAAMTAHRYLRRPSLYLEAALESLGKIFAGKTLCKECLFNEKHESNVKIKPRRVKKSH
SDARSRARRA
NT seq 2373 nt   +upstreamnt  +downstreamnt
atgttcactcttttgagatgtctcggattcggtgttaatgaacctactaacacttcctca
tcagagtatgttcccgagtattccgttgaagagatttccaacgaagtcgctgaactcgat
tcagtggatccattattccaatgttacaaacatgtttttgtatcattgatgctcgtaaga
aagatgactcaagctgccgaagacttcctcgagagttttgggggagaattcgatagccct
tgttgtagggtttaccgtctttatagacattttgttaatgaagacgatgcacccgcttgg
gccataccgaatgtcgtgaatgaagattcttacgacgattatgcctacctccgagaggag
ttagatgccatagacagctcttttgagttgctaaacgaagagcgtgagttatcggaaatt
acggacagactcaacgctttaagatttttccctgtttctaaaacagaagcgctaccagtg
gcgaatgtccaagaggtcaaactcatttctgagacataccagttattgatgacctttatt
aactactctgacgagaatattccgtctgaaatgcccgcaccattactggatgagttgggg
atgttaccggaggaacttggacctctgaatgaaattgaagacattaagccggtggcggct
ccaatcacattactatctgagtttagagcctcagataatgctaagccactcgacatagtc
gaaatcattccagacgtaagtccgacgaaaccttatgaagccgtcatatcaggtaatgat
tggatgacgttggggaggatcatacctaccactcccgttcctaccataagggatgtcttc
ttctctggtctttctcggcacggatcgccggaagtgatccagaatgctcttgatgaattt
cttccgctccatcattcaattgatgataagtattttcaagaatgggttgaaacctcagat
aaatctctcgatgtcgatccatgtcgaatcgatctgagtgttttcaacaactggcagtct
tcggaaaactgctatgaacctcggtttaaaaccggtgcattatccacacgtaagggcact
caaactgaagccctattagcgataaagaaacgtaatatgaatgtgcctaacctggggcag
atttatgacgtgaattctgttgctaattccgtggttaataagctcttaacaactgttata
gatcctgataagctgtgcatgtttccagatttcatatctgagggtgaagtttcgtatttc
caggactatatagttgggaagaatcccgaccctgaattatattcagatcctctaggtgtt
cgttccatcgatagctataaacacatgattaaatccgtgttaaagcccgttgaagataat
tctctgcacctagaacggccgatgccagcaaccataacataccatgataaagatatcgtg
atgtcatcttcaccaatttttttggctgctgctgcccgcttgatgttaatcttaagagat
aagataaccataccaagcggaaaattccatcaattgttttccatcgatgctgaagccttt
gatgcaagtttccattttaaagagatagacttttcgaagtttgacaaaagtcaaaatgag
ttgcatcacttgatccaggaaaggtttctgaaatacttaggtatacccaacgaatttcta
accttatggtttaatgcgcatagaaaatcccgaatctcagattcgaagaatggcgttttt
tttaacgtcgatttccaacgtcgtactggagatgcgctcacgtacttgggaaacacaata
gtgacattagcttgtctgtgtcacgtgtatgacttgatggacccaaatgtgaaattcgtt
gttgcttccggtgatgattcattgataggcactgtggaggaattaccaagagatcaagag
tttcttttcacgactctttttaatcttgaagcaaagtttcctcataaccagcctttcata
tgcagtaagtttttgattactatgcccactacaagtggaggcaaagttgtcctgccgata
ccgaatccattgaaactcctcatacgcttgggttcgaagaaagtcaatgccgatatattc
gatgaatggtatcaatcttggattgatataattggtggttttaacgaccaccatgtcatc
cgatgcgttgccgcgatgacagcacataggtatctcagaagaccgagtttatacctagaa
gctgctttggaatccctaggtaagatcttcgctggtaagaccttgtgtaaggaatgcctc
tttaatgagaagcacgagtctaatgtaaaaattaagcctcgtagagtgaaaaaatcccac
tcggatgccaggtcaagggcacgccgagcttga

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