Viruses: 962673
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Entry
962673 CDS
T40000
Symbol
BSMVs1gp1
Name
(RefSeq) Barley stripe mosaic virus; alpha protein
Virus
12327
Barley stripe mosaic virus
Taxonomy
SSDB
Ortholog
Paralog
GFIT
VOG
VOG cluster
Motif
Pfam:
Vmethyltransf
Viral_helicase1
UvrD_C_2
Motif
Other DBs
NCBI-GeneID:
962673
NCBI-ProteinID:
NP_604474
RS:
NC_003469
UniProt:
P17595
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Position
NC_003469:92..3511
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AA seq
1139 aa
AA seq
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MASDEIVRNLISREEVMGNLISTASSSVRSPLHDVLCSHVRTIVDSVDKKAVSRKHEDVR
RNISSEELQMLINAYPEYAVSSSACESGTHSMAACFRFLETEYLLDMVPMKETFVYDIGG
NWFSHMKFRADREIHCCCPILSMRDSERLETRMMAMQKYMRGSKDKPLRLLSRYQNILRE
QAARTTAFMAGEVNAGVLDGDVFCENTFQDCVRRVPEGFLKTAIAVHSIYDIKVEEFASA
LKRKGITQAYGCFLFPPAVLIGQKEGILPSVDGHYLVENGRIKFFFANDPNAGYSHDLKD
YLKYVEKTYVDIEDGVFAIELMQMRGDTMFFKITDVTAAMYHMKYRGMKRDETFKCIPLL
KNSSVVVPLFSWDNRSLKITSGLLPRTLVEQGAAFIMKNKEKDLNVAVLKNYLSAVNNSY
IFNGSQVRDGVKIAPDLISKLAVTLYLREKVYRQRENSIISYFEQEMLHDPNLKAMFGDF
LWFVPNTLSSVWKNMRKSLMEWFGYAEFDLTTFDICDPVLYVEIVDRYKIIQKGRIPLGE
FFDCHEECENYELREKEKNDLAVKMAQKVTGTVTECEKDLGPLVQPIKEILVQLVMPNLV
RALCRPRSPTSPLDLKSIPGSTPSHSSSDSEHSMTEEASCTIAGSVPTWEIATRKDLTFQ
RIDEDMSRRTGMPPRPKVTSSYNMNARAEFLYYQLCSVICERAQILSVIEDFRQNLIFSD
KVAVPLNARFYSFQSLRPGWVFKTPSHSEVGHSYAVHFDFKTIGTDLEESLAFCRMVPIS
WDKSGKYIATTPHFPERHGYYVICDNTKLCNNWLIYNKLVDVYALVADRPLRFELIDGVP
GCGKSTMILNSCDIRREVVVGEGRNATDDLRERFKRKKNLNSKTANHRVRTLDSLLLAEG
PCVPQADRFHFDEALKVHYGAIMFCADKLGASEILAQGDRAQLPMICRVEGIELQFQSPD
YTKTIINPKLRSYRIPGDVAFYLSAKEFYKVKGIPQKVITSNSVKRSLYARGETTPERFV
SLLDVPVRKDTHYLTFLQAEKESLMSHLIPKGVKKESISTIHEAQGGTYENVILVRLQRT
PNEIYPGGPRSAPYIVVGTSRHTKTFTYCSVTDDKLLLDIADVGGIAHTPIRTFESHIV
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atggctagcgatgagattgtccgcaatctgatctcccgtgaggaggtgatgggtaatttg
attagcacagcttctagctcagtaaggtcacccttacatgacgtactgtgctcgcacgta
aggaccatcgtcgattccgtggataagaaagcggtcagtcgcaagcatgaagatgtacgg
cgcaacatctcctctgaggaattgcagatgttgataaatgcatatcctgaatatgccgtt
tcatcctcagcttgtgaatctggtactcatagcatggcggcttgttttcgatttctggag
acagaatatctcttagatatggttccaatgaaagagacttttgtttatgacattggtggc
aactggttttctcatatgaagtttcgtgctgatagagaaattcattgttgctgtccgatc
ttatctatgagagattctgaaagactggaaacacgcatgatggcaatgcaaaaatatatg
cgtggatcgaaagacaaaccgttacgcttgttaagccgttatcaaaatatcctgcgtgaa
caagcggcgagaacaactgcctttatggcaggtgaggtgaatgcgggtgttctcgatgga
gatgtgttttgtgagaacacttttcaagactgtgtgagacgagtgcccgaaggttttttg
aagacagctatagcagttcatagcatctacgatatcaaagtggaggaatttgcgtctgca
ttgaaaagaaaaggtataacacaggcttatgggtgtttcctgtttcctcctgctgtattg
ataggtcagaaggaaggcattttaccttccgtggacggtcattacttggtggagaatggc
aggattaagttcttctttgcgaatgatccgaatgccggttactctcatgaccttaaggat
tatctgaagtatgtggaaaagacctatgtggatatagaggatggagtgtttgctattgag
ctgatgcaaatgcgaggtgataccatgttctttaagatcacggatgtcaccgcagcaatg
tatcatatgaaatacagaggtatgaaacgcgatgaaacattcaaatgcattccgttgcta
aagaattcatctgttgtcgtacctctattttcgtgggacaaccgttctttaaagatcaca
agtggtttactaccacgaactttggtcgagcagggtgcggcttttattatgaaaaacaag
gagaaggacttgaacgttgctgtgttgaagaactatctttccgctgtgaacaactcatac
attttcaacggatcccaggttagagatggcgtgaaaattgccccggatttaatctccaag
ttggcagtgactctgtacctgagagaaaaagtctatcgacaaagagaaaattcaatcata
agttatttcgagcaagaaatgcttcacgatcccaacttgaaagccatgtttggagacttt
ctgtggtttgttccaaatactctctcgagtgtctggaagaacatgcgaaaatcactgatg
gaatggtttggctacgcagaatttgacttgactacttttgatatttgcgatcccgttctc
tatgtagagatagtggatcggtataagatcattcaaaaagggcgaattccacttggtgag
ttctttgattgtcatgaagaatgcgagaattacgaactgcgtgagaaggagaaaaacgac
ctagcggtgaaaatggcccagaaggtaacagggacggtgaccgaatgcgagaaggacctg
ggacctcttgttcaaccgataaaagagatattggttcaacttgtgatgcccaatttggtc
agagcgctgtgtagacctcgtagcccaacgtctcctttggacttaaaaagtatcccaggg
tcaactccatcacactcaagttcagattctgaacactctatgactgaagaagcgagctgc
accattgcgggtagcgtaccaacatgggaaattgcgactaggaaagatctaacctttcag
cgaattgatgaagatatgtctcgacgaactggtatgcctccaagaccaaaagtaacttct
agttacaacatgaatgccagagctgagtttctctactatcaactgtgtagcgtgatttgt
gaaagggctcagattttgagtgtcatcgaagactttcgtcagaatttgatattctcagat
aaagtggccgttccattgaacgctagattctacagttttcagtcattgagacccggatgg
gtgttcaaaactccatcgcatagtgaagtaggccacagttatgcagtacattttgacttc
aagacaattggaaccgatttggaagagagcctagctttttgccgaatggtaccgatttca
tgggataaaagcggcaaatacatcgcgacaactcctcattttcccgagagacatggttac
tacgtgatttgtgacaacactaaattgtgtaacaattggcttatttacaataagttagtt
gacgtctacgcactagtggctgatagacctctgagattcgagttgattgacggagttcct
ggctgcggaaagtcaaccatgattttaaacagctgtgatattcgacgcgaagttgttgtt
ggtgaaggacggaatgcaactgatgacttaagggagaggttcaagcgtaagaaaaatttg
aatagtaagactgctaatcacagagttcgaacgcttgacagcttattacttgctgaagga
ccttgtgtaccgcaagctgataggtttcattttgatgaagctctaaaagttcattacggc
gccataatgttctgtgctgataagcttggtgcctcagaaattctcgctcagggagatagg
gctcaattgccaatgatctgtcgtgtagaaggtattgaacttcaatttcaatctcctgat
tacacgaagacgatcataaatcctaagctacggtcataccgtatccctggagatgttgcc
ttctatttgagtgctaaggaattttacaaagttaaaggaatacctcaaaaggttataact
tctaacagtgtgaaacgttccttgtacgctagaggcgaaacgactccggaaagattcgtg
agtttgcttgatgttccggtgagaaaagacacccactatctaaccttcttacaagctgag
aaggaaagtttgatgagtcatttgattccaaagggtgtgaagaaagagtctatttcaacg
attcatgaggcgcagggtggtacctatgaaaatgtgattctggtccgtttgcaacggacg
cccaatgaaatttatccgggtggacctaggtccgccccttacattgtggttgggacttca
aggcatacaaaaactttcacttattgtagtgttacggacgataagttgcttttagatatc
gccgacgtcggtggtattgcacatacacctattcgtacttttgaatctcatatagtttaa
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integrated database retrieval system
